| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yieH [H]
Identifier: 110633119
GI number: 110633119
Start: 837041
End: 837730
Strand: Reverse
Name: yieH [H]
Synonym: Meso_0762
Alternate gene names: 110633119
Gene position: 837730-837041 (Counterclockwise)
Preceding gene: 110633121
Following gene: 229259627
Centisome position: 18.99
GC content: 63.04
Gene sequence:
>690_bases ATGCCAAAACCTGATCTCGTCATTTTCGATTGCGACGGCGTGCTCGTCGATTCCGAAATCGTCGCCGCTCGCGTCGAGGC GGAGATGCTGCGCGAGGCGGGCTACGACATCACTGCGGACGAGATTGCGGAGCGCTATTCGGGCCTTACCTTCAAGGACA TCATGATCCATATCGAGAAGGAGGCGCAGATGCTCCTACAGGCCTCCATGATCAAGCAAGCGGAGGCCAAGGTCGACGAG AGGCTGCGCGCGGAGGTGAAGGCGATACCGGGCGTAGCGGAGGCGGCCGCCTCGCTTTCAGTTAAAAAATGCGTCTGCTC CAATTCGAGCGAGGAGCGAATCGCCATCATGCTCCAGCGCACGAATCTCGCGCGCTTTTTCGAAGGTGTCATCTTCTCCT CGCTCGCCACGCCCACCAAGCGGCCGAAGCCGGCGCCGGACGTGTTTCTCTATGCGGCGGAGCAGATGGGCGCGGAGCCC GCGGGGACGATCGTGATCGAGGATTCCGTCCACGGGATCATGGGGGCGAGGACCGCCGGAATGCGCGTCATCGGCTTCAC CGGCGCTTCCCACAGCCACCCCCGGCACGCTTCCATGCTGATGGAGGCGGGCGCCGAAACCACGATCAGCCGCATGGCCG ACCTCAAGTCCACCATTGCCGCGCTTTCGGAGTGGTCGGAGGAGGGGTGA
Upstream 100 bases:
>100_bases ACCGCCGAGATAGGGCTTCACCCCTCACCGAGCCGGTTGATCCGTATGCGCTTCGGGGTTATGGCCTCGCGTCCCCTCCA CTTTCGTTGATGTAGAGCCA
Downstream 100 bases:
>100_bases GGACCTGCCGTCATTGCCCTCACTTTTCTAACACCTAGCCTTCGCGTTGCTCCGGCTAACGCGTTGTAATCGCTTTCTCC CCCATCAAGGGGGAGATAAC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPKPDLVIFDCDGVLVDSEIVAARVEAEMLREAGYDITADEIAERYSGLTFKDIMIHIEKEAQMLLQASMIKQAEAKVDE RLRAEVKAIPGVAEAAASLSVKKCVCSNSSEERIAIMLQRTNLARFFEGVIFSSLATPTKRPKPAPDVFLYAAEQMGAEP AGTIVIEDSVHGIMGARTAGMRVIGFTGASHSHPRHASMLMEAGAETTISRMADLKSTIAALSEWSEEG
Sequences:
>Translated_229_residues MPKPDLVIFDCDGVLVDSEIVAARVEAEMLREAGYDITADEIAERYSGLTFKDIMIHIEKEAQMLLQASMIKQAEAKVDE RLRAEVKAIPGVAEAAASLSVKKCVCSNSSEERIAIMLQRTNLARFFEGVIFSSLATPTKRPKPAPDVFLYAAEQMGAEP AGTIVIEDSVHGIMGARTAGMRVIGFTGASHSHPRHASMLMEAGAETTISRMADLKSTIAALSEWSEEG >Mature_228_residues PKPDLVIFDCDGVLVDSEIVAARVEAEMLREAGYDITADEIAERYSGLTFKDIMIHIEKEAQMLLQASMIKQAEAKVDER LRAEVKAIPGVAEAAASLSVKKCVCSNSSEERIAIMLQRTNLARFFEGVIFSSLATPTKRPKPAPDVFLYAAEQMGAEPA GTIVIEDSVHGIMGARTAGMRVIGFTGASHSHPRHASMLMEAGAETTISRMADLKSTIAALSEWSEEG
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=197, Percent_Identity=28.9340101522843, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1789046, Length=181, Percent_Identity=31.4917127071823, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788021, Length=182, Percent_Identity=29.1208791208791, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI20129151, Length=227, Percent_Identity=27.3127753303965, Blast_Score=74, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24758; Mature: 24627
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPDLVIFDCDGVLVDSEIVAARVEAEMLREAGYDITADEIAERYSGLTFKDIMIHIEK CCCCCEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHH EAQMLLQASMIKQAEAKVDERLRAEVKAIPGVAEAAASLSVKKCVCSNSSEERIAIMLQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEH TNLARFFEGVIFSSLATPTKRPKPAPDVFLYAAEQMGAEPAGTIVIEDSVHGIMGARTAG HHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEHHHHCCCCCCEEEECCCCCHHHHCCCCC MRVIGFTGASHSHPRHASMLMEAGAETTISRMADLKSTIAALSEWSEEG EEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PKPDLVIFDCDGVLVDSEIVAARVEAEMLREAGYDITADEIAERYSGLTFKDIMIHIEK CCCCEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHH EAQMLLQASMIKQAEAKVDERLRAEVKAIPGVAEAAASLSVKKCVCSNSSEERIAIMLQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEH TNLARFFEGVIFSSLATPTKRPKPAPDVFLYAAEQMGAEPAGTIVIEDSVHGIMGARTAG HHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEHHHHCCCCCCEEEECCCCCHHHHCCCCC MRVIGFTGASHSHPRHASMLMEAGAETTISRMADLKSTIAALSEWSEEG EEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]