| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yihX [C]
Identifier: 110633121
GI number: 110633121
Start: 839341
End: 839952
Strand: Reverse
Name: yihX [C]
Synonym: Meso_0764
Alternate gene names: 110633121
Gene position: 839952-839341 (Counterclockwise)
Preceding gene: 110633122
Following gene: 110633119
Centisome position: 19.04
GC content: 58.82
Gene sequence:
>612_bases ATGAGCGAAATCCGCCACATCGTCTTCGATATCGGCAAGGTTCTGATCCATTACGACCCGGAGATCCCTTATTCGCGGCT CATTCCCGATGCGCAAGAGCGACGCTGGTTCTTCGACAATGTCTGCACCCATGACTGGAACCTGGAGCAGGACCGCGGCC GAACGTGGGAAGACGCGGAAGCAATGCTGATTGCGCTTCATCCCGTGCATGAGGAGAACATCCGCGCCTTCCGGCGTTGC TGGCATGAAATGGTGTCGCATTCTTACGAGGATACCGTCGCGATCCTGGAAGACCTTATCGAAGCCGGCCATGATGTGAC GATGCTGACCAATTTCGCTGGCGATACCTTCATGGAAGCGCGGCAGCGCTTTCCCTTCCTCAACAAGCCGCGCGGGGTGA CCGTCTCGGGCGATATCAGGCTGATCAAGCCGGATCTGGAAATCTACGAGCACCACGCGGCAAGCTTCGGGCTGGAGCCT GCGGCGACGCTCTTTATCGACGACAACGCCGCCAATGTGGCCGGGGCCGAGGCAGCCGGGTGGCAGGCCGTGCAGTTCGA AAGCGCGGAAAAGCTAAAGAAGGATTTGAGGCGGTTTGCCGTGGAGGTTTGA
Upstream 100 bases:
>100_bases CACCGCGCGAATTGCGCGGGGAAGCGCTGCCGACCGTCATGAAAAAAGCGATCGAGGCCGCTATACCCGGCGCGACAAAG ACAAGGAGACAAGACGCCCG
Downstream 100 bases:
>100_bases GAGTGGCGGCGTATCGAGGCTCCCCCTCTCTTGCGATTTCTAACACTTAGCCTGCGCGCTGCTTCGGCTAAGATGTTGAA ATCGCTTTCTCCCCCACCAA
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase; Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; Alpha Beta Hydrolase; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAEAMLIALHPVHEENIRAFRRC WHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEARQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEP AATLFIDDNAANVAGAEAAGWQAVQFESAEKLKKDLRRFAVEV
Sequences:
>Translated_203_residues MSEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAEAMLIALHPVHEENIRAFRRC WHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEARQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEP AATLFIDDNAANVAGAEAAGWQAVQFESAEKLKKDLRRFAVEV >Mature_202_residues SEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAEAMLIALHPVHEENIRAFRRCW HEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEARQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEPA ATLFIDDNAANVAGAEAAGWQAVQFESAEKLKKDLRRFAVEV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23420; Mature: 23288
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAE CCHHHHHHHHHHHHEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AMLIALHPVHEENIRAFRRCWHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEA EEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHH RQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEPAATLFIDDNAANVAGAEAAG HHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC WQAVQFESAEKLKKDLRRFAVEV CEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAE CHHHHHHHHHHHHEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC AMLIALHPVHEENIRAFRRCWHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEA EEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHH RQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEPAATLFIDDNAANVAGAEAAG HHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC WQAVQFESAEKLKKDLRRFAVEV CEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA