Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is yihX [C]

Identifier: 110633121

GI number: 110633121

Start: 839341

End: 839952

Strand: Reverse

Name: yihX [C]

Synonym: Meso_0764

Alternate gene names: 110633121

Gene position: 839952-839341 (Counterclockwise)

Preceding gene: 110633122

Following gene: 110633119

Centisome position: 19.04

GC content: 58.82

Gene sequence:

>612_bases
ATGAGCGAAATCCGCCACATCGTCTTCGATATCGGCAAGGTTCTGATCCATTACGACCCGGAGATCCCTTATTCGCGGCT
CATTCCCGATGCGCAAGAGCGACGCTGGTTCTTCGACAATGTCTGCACCCATGACTGGAACCTGGAGCAGGACCGCGGCC
GAACGTGGGAAGACGCGGAAGCAATGCTGATTGCGCTTCATCCCGTGCATGAGGAGAACATCCGCGCCTTCCGGCGTTGC
TGGCATGAAATGGTGTCGCATTCTTACGAGGATACCGTCGCGATCCTGGAAGACCTTATCGAAGCCGGCCATGATGTGAC
GATGCTGACCAATTTCGCTGGCGATACCTTCATGGAAGCGCGGCAGCGCTTTCCCTTCCTCAACAAGCCGCGCGGGGTGA
CCGTCTCGGGCGATATCAGGCTGATCAAGCCGGATCTGGAAATCTACGAGCACCACGCGGCAAGCTTCGGGCTGGAGCCT
GCGGCGACGCTCTTTATCGACGACAACGCCGCCAATGTGGCCGGGGCCGAGGCAGCCGGGTGGCAGGCCGTGCAGTTCGA
AAGCGCGGAAAAGCTAAAGAAGGATTTGAGGCGGTTTGCCGTGGAGGTTTGA

Upstream 100 bases:

>100_bases
CACCGCGCGAATTGCGCGGGGAAGCGCTGCCGACCGTCATGAAAAAAGCGATCGAGGCCGCTATACCCGGCGCGACAAAG
ACAAGGAGACAAGACGCCCG

Downstream 100 bases:

>100_bases
GAGTGGCGGCGTATCGAGGCTCCCCCTCTCTTGCGATTTCTAACACTTAGCCTGCGCGCTGCTTCGGCTAAGATGTTGAA
ATCGCTTTCTCCCCCACCAA

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase; Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; Alpha Beta Hydrolase; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAEAMLIALHPVHEENIRAFRRC
WHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEARQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEP
AATLFIDDNAANVAGAEAAGWQAVQFESAEKLKKDLRRFAVEV

Sequences:

>Translated_203_residues
MSEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAEAMLIALHPVHEENIRAFRRC
WHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEARQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEP
AATLFIDDNAANVAGAEAAGWQAVQFESAEKLKKDLRRFAVEV
>Mature_202_residues
SEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAEAMLIALHPVHEENIRAFRRCW
HEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEARQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEPA
ATLFIDDNAANVAGAEAAGWQAVQFESAEKLKKDLRRFAVEV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23420; Mature: 23288

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAE
CCHHHHHHHHHHHHEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AMLIALHPVHEENIRAFRRCWHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEA
EEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHH
RQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEPAATLFIDDNAANVAGAEAAG
HHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
WQAVQFESAEKLKKDLRRFAVEV
CEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEIRHIVFDIGKVLIHYDPEIPYSRLIPDAQERRWFFDNVCTHDWNLEQDRGRTWEDAE
CHHHHHHHHHHHHEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AMLIALHPVHEENIRAFRRCWHEMVSHSYEDTVAILEDLIEAGHDVTMLTNFAGDTFMEA
EEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHH
RQRFPFLNKPRGVTVSGDIRLIKPDLEIYEHHAASFGLEPAATLFIDDNAANVAGAEAAG
HHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC
WQAVQFESAEKLKKDLRRFAVEV
CEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA