| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633108
Identifier: 110633108
GI number: 110633108
Start: 826043
End: 826528
Strand: Reverse
Name: 110633108
Synonym: Meso_0751
Alternate gene names: NA
Gene position: 826528-826043 (Counterclockwise)
Preceding gene: 110633109
Following gene: 110633097
Centisome position: 18.73
GC content: 61.93
Gene sequence:
>486_bases ATGACCATTTCCGTTGGCGAACGGCTGCCGAACGTCACCATCAAAAAGGCCACGCCCAATGGCGCCGAGGAGACGACCAC GAGAGACTTCTTTGCCGGCCGCAAGGTGGTGCTATTCGGAGTGCCGGGCGCATTCACGCCCACCTGCAGCAACAGTCATC TGCCCGGCTTCATCGAAAATTACGATGCGATAGTATCGCGCGGCATCGACGCGGTGGCGGTCGTTTCGGTCAACGATGCA TTCGTGATGGGTGCGTGGGCAAGGTTCACAGGCGCCGAGGACAAGCTGGTTTTCCTGGCGGACGGGAGCGGCGATTTCGC GCGCGCGGTCGGCCTCGATCTCGATCTTTCCGCGAGAGGCATGGGCCTGCGTTCGCAGCGCTATTCGATGATCGTCGAGG ATGGCATCGTGAAGGCGATCAACGTCGAGGAAGTTCCCGGCCAGGCGGTGACGAGCGGCGCGGCCCGCATTCTGGAGCAG CTTTGA
Upstream 100 bases:
>100_bases TGCTCTTCCCTGACCGATCGCCTATGGTGCCCGGCCGCAACAGCATCTTCGATCAGGAGTTGCGTCTTAAAAGTTCTCAT TGATCCCAGGGAGATATTGC
Downstream 100 bases:
>100_bases TCAACCTCATGCTCTAGCGGCGGCGCGCGCTTCCTTCCTCGGAAGAGGCCGTGTCGCCCCCCTTTTTCTTCTTGAACGGG GCCATGCCGGCGCGGGCCAA
Product: redoxin
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTISVGERLPNVTIKKATPNGAEETTTRDFFAGRKVVLFGVPGAFTPTCSNSHLPGFIENYDAIVSRGIDAVAVVSVNDA FVMGAWARFTGAEDKLVFLADGSGDFARAVGLDLDLSARGMGLRSQRYSMIVEDGIVKAINVEEVPGQAVTSGAARILEQ L
Sequences:
>Translated_161_residues MTISVGERLPNVTIKKATPNGAEETTTRDFFAGRKVVLFGVPGAFTPTCSNSHLPGFIENYDAIVSRGIDAVAVVSVNDA FVMGAWARFTGAEDKLVFLADGSGDFARAVGLDLDLSARGMGLRSQRYSMIVEDGIVKAINVEEVPGQAVTSGAARILEQ L >Mature_160_residues TISVGERLPNVTIKKATPNGAEETTTRDFFAGRKVVLFGVPGAFTPTCSNSHLPGFIENYDAIVSRGIDAVAVVSVNDAF VMGAWARFTGAEDKLVFLADGSGDFARAVGLDLDLSARGMGLRSQRYSMIVEDGIVKAINVEEVPGQAVTSGAARILEQL
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=161, Percent_Identity=45.3416149068323, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323138, Length=134, Percent_Identity=38.0597014925373, Blast_Score=86, Evalue=3e-18, Organism=Drosophila melanogaster, GI78706776, Length=142, Percent_Identity=46.4788732394366, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI78709078, Length=142, Percent_Identity=46.4788732394366, Blast_Score=134, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17038; Mature: 16906
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISVGERLPNVTIKKATPNGAEETTTRDFFAGRKVVLFGVPGAFTPTCSNSHLPGFIEN CEECCCCCCCCCEEEECCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHH YDAIVSRGIDAVAVVSVNDAFVMGAWARFTGAEDKLVFLADGSGDFARAVGLDLDLSARG HHHHHHCCCCEEEEEEECCEEEEECHHCCCCCCCCEEEEECCCCCEEEHCCCCCCCCCCC MGLRSQRYSMIVEDGIVKAINVEEVPGQAVTSGAARILEQL CCCCCHHHEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure TISVGERLPNVTIKKATPNGAEETTTRDFFAGRKVVLFGVPGAFTPTCSNSHLPGFIEN EECCCCCCCCCEEEECCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHH YDAIVSRGIDAVAVVSVNDAFVMGAWARFTGAEDKLVFLADGSGDFARAVGLDLDLSARG HHHHHHCCCCEEEEEEECCEEEEECHHCCCCCCCCEEEEECCCCCEEEHCCCCCCCCCCC MGLRSQRYSMIVEDGIVKAINVEEVPGQAVTSGAARILEQL CCCCCHHHEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]