| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633109
Identifier: 110633109
GI number: 110633109
Start: 826616
End: 827419
Strand: Reverse
Name: 110633109
Synonym: Meso_0752
Alternate gene names: NA
Gene position: 827419-826616 (Counterclockwise)
Preceding gene: 110633111
Following gene: 110633108
Centisome position: 18.75
GC content: 63.31
Gene sequence:
>804_bases ATGCAATTTAGATTGACCGCCGCCCTGCCCATCCTTCTTGCCCTGATTGCGCCGGCAACCGCTTCGTCTACATCATGGAT GGAGAGCGACGGGGCCGCCATCCGCATCGTGAGTTCCGGCCTCAGCGACGAAAAGGGCGCGCTGCGCGGTGCGGTCGAGA TCAGGCTGAAGCCGGGTTGGAAGACCTATTGGCGCGCTCCCGGGGAAGCCGGCGTGCCGCCCGAGATCGAGCTTGCGCCG ACATCGGACGCGCGGTCCGCCGAGCTCTTCTTTCCCGCGCCCGAACGCATCAGCGACGCCTATGCAAGCTGGGCCGGTTA CAAGCACCCCGTGAGCCTGCCGGTGATCTTCGATTTTCCCAAGGCCGGCACTGCCGGGATCATCGAAGGTAAGATTTTCC TGGGCGTGTGCGAGACGGTCTGCATTCCGGTTGAATTACCCTTCTCTTTCGATGCGGGGACGGATCCGGACAATGCCGGC GACGCGATCGCCGTGGCGGCCGCATTCGCCGCGCTGCCTGGCCCGGCGCGCGAGGATTTCGGCGTGAGCGAAGTTCTTCG CGAACGATCTCACATGGAATTTCATGTGAAGCTGCCTCCCGACACGCAGCATCCTGCCCTTTTCGTGGCTCCGCCCGCGC AGGTGCAGATCACCATGCCCAAACTTCAGGAGCGGCAGGAGACGAGCGCCATCTTCACCGCCAAATCCTTGGGCGACCCC GCCCTATTCAAGGAGCCGCTGACAATCGAATACACGCTGGTATCGGGGGGCAAGGCGGTGGCCGGGCAAATTGCTCTTCC CTGA
Upstream 100 bases:
>100_bases AGGCTGTAGTGAGCGCTGCCTTCCATGATCACATCAAAATGAGTAGCGCAGTGCCTCGCACGCGTTGCAATCATCACGCT CCACCGCCATTGTGCGCGCC
Downstream 100 bases:
>100_bases CCGATCGCCTATGGTGCCCGGCCGCAACAGCATCTTCGATCAGGAGTTGCGTCTTAAAAGTTCTCATTGATCCCAGGGAG ATATTGCATGACCATTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MQFRLTAALPILLALIAPATASSTSWMESDGAAIRIVSSGLSDEKGALRGAVEIRLKPGWKTYWRAPGEAGVPPEIELAP TSDARSAELFFPAPERISDAYASWAGYKHPVSLPVIFDFPKAGTAGIIEGKIFLGVCETVCIPVELPFSFDAGTDPDNAG DAIAVAAAFAALPGPAREDFGVSEVLRERSHMEFHVKLPPDTQHPALFVAPPAQVQITMPKLQERQETSAIFTAKSLGDP ALFKEPLTIEYTLVSGGKAVAGQIALP
Sequences:
>Translated_267_residues MQFRLTAALPILLALIAPATASSTSWMESDGAAIRIVSSGLSDEKGALRGAVEIRLKPGWKTYWRAPGEAGVPPEIELAP TSDARSAELFFPAPERISDAYASWAGYKHPVSLPVIFDFPKAGTAGIIEGKIFLGVCETVCIPVELPFSFDAGTDPDNAG DAIAVAAAFAALPGPAREDFGVSEVLRERSHMEFHVKLPPDTQHPALFVAPPAQVQITMPKLQERQETSAIFTAKSLGDP ALFKEPLTIEYTLVSGGKAVAGQIALP >Mature_267_residues MQFRLTAALPILLALIAPATASSTSWMESDGAAIRIVSSGLSDEKGALRGAVEIRLKPGWKTYWRAPGEAGVPPEIELAP TSDARSAELFFPAPERISDAYASWAGYKHPVSLPVIFDFPKAGTAGIIEGKIFLGVCETVCIPVELPFSFDAGTDPDNAG DAIAVAAAFAALPGPAREDFGVSEVLRERSHMEFHVKLPPDTQHPALFVAPPAQVQITMPKLQERQETSAIFTAKSLGDP ALFKEPLTIEYTLVSGGKAVAGQIALP
Specific function: Unknown
COG id: COG4233
COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28334; Mature: 28334
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFRLTAALPILLALIAPATASSTSWMESDGAAIRIVSSGLSDEKGALRGAVEIRLKPGW CEEEEHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCC KTYWRAPGEAGVPPEIELAPTSDARSAELFFPAPERISDAYASWAGYKHPVSLPVIFDFP HHEEECCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECC KAGTAGIIEGKIFLGVCETVCIPVELPFSFDAGTDPDNAGDAIAVAAAFAALPGPAREDF CCCCCEEEECEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC GVSEVLRERSHMEFHVKLPPDTQHPALFVAPPAQVQITMPKLQERQETSAIFTAKSLGDP CHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHEEEECCCCCH ALFKEPLTIEYTLVSGGKAVAGQIALP HHCCCCCEEEEEEECCCCEEECEECCC >Mature Secondary Structure MQFRLTAALPILLALIAPATASSTSWMESDGAAIRIVSSGLSDEKGALRGAVEIRLKPGW CEEEEHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCC KTYWRAPGEAGVPPEIELAPTSDARSAELFFPAPERISDAYASWAGYKHPVSLPVIFDFP HHEEECCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECC KAGTAGIIEGKIFLGVCETVCIPVELPFSFDAGTDPDNAGDAIAVAAAFAALPGPAREDF CCCCCEEEECEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC GVSEVLRERSHMEFHVKLPPDTQHPALFVAPPAQVQITMPKLQERQETSAIFTAKSLGDP CHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHEEEECCCCCH ALFKEPLTIEYTLVSGGKAVAGQIALP HHCCCCCEEEEEEECCCCEEECEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA