| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632894
Identifier: 110632894
GI number: 110632894
Start: 583993
End: 585057
Strand: Reverse
Name: 110632894
Synonym: Meso_0534
Alternate gene names: NA
Gene position: 585057-583993 (Counterclockwise)
Preceding gene: 110632895
Following gene: 110632893
Centisome position: 13.26
GC content: 65.92
Gene sequence:
>1065_bases ATGATGGCCAGCTTGGACGCATCCGATCTCGCGGCCCGCCTCGCCGGCCAGGCCGAAGCCGTGTGCCGGCACTATCTGTC CAACGGCACAAGGCAGGGAGCCTACTGGCTGGTCGGCGACGTTCGCAACACGCCGGGCCGCTCAATGTTCGTGCGGCTCA AGGGGCCGCAGACGGGTAAGGGCGCCGCCGGCAAGTGGACCGACGCCGCCACCGGCGAGCATGGCGATCTGCTCGATGTC ATTCGCGAAACCTGCAGCCTTCCCGACTTCAAGCAAATCGCCGAGGAGGCACGGCGCTTCTTGAGCCTCCCGCATCCAGA GCCAAATCGAGAACCGCGGCGAGGCAAGACGTCCGCGGCGCCCATGGGCTCGTCAGAAGCCGCGAGGCGTCTCTTCGCGA TGGCACAGCCGATCAGTCGTACACTCGCCGAGACGTATCTGCGCGCACGCGGCATTACGTCTTTGCACGAAACCGGATCG CTGCGTTTTCATCCCCGCTGCTTCTTCCGCCCCGATGAGCATTCCCCGACCGAGATCTGGCCGGCGATCATCGCAGCCGT CACGGATCTCAATGGCGAGCTAACCGGCGCACATCGCACTTGGCTGGACCCCGACGGCTTCAACGAAGCGACCTTAGGCA AGGCGCCAGTCGAGACACCGAGACGGGCGATGGGCAATCTCCTCGGGTCTGCCGTGCGCTTCGGACTGCCAGGCTCGGTG ATGGCGGCCGGCGAAGGCGTCGAGACCATGCTGTCGCTGCGCTGCGTCCTGCCGACCATGCCGATGGCAGCCGCGCTGTC GGCGGCGCATCTCGCTGCCATCCAGTTTCCCGACACCCTGCACCGGCTGTATGTCGCGCGTGATGACGATCCCGCTGGCG ATGTGGCGGTGACGACCTTGATGACCCGCGCGGATGAAGCGGGCATCGAGACGGTCATCCTGTCTCCGACCCTCGGCGAC TTCAATGAAGACCTCCGGCTGCTGGGACACGCGGCGCTCCGGACGGCCATCCGTGTCCAAATCGCGCCCCAGGACGTCGC ACGCTTCATGCAGCACACAGCCTAA
Upstream 100 bases:
>100_bases AGCTCCGGATGTTCGTTCCCACCGACGCGACCGGCGTGGCCGTCCTTGCCAAGGTGATGGAGCGCTATCCAGTCACGCGG ATCTCTGAACGGGAGGCCGC
Downstream 100 bases:
>100_bases CCGGGATGGAGGCAGGCGGCTGCCGGTCGAGCACTTCGACCAACGCTCGCATCCGGGATGACCGTTTCGCCAGAGGACCG CGCCCCGGCCTTCCAGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MMASLDASDLAARLAGQAEAVCRHYLSNGTRQGAYWLVGDVRNTPGRSMFVRLKGPQTGKGAAGKWTDAATGEHGDLLDV IRETCSLPDFKQIAEEARRFLSLPHPEPNREPRRGKTSAAPMGSSEAARRLFAMAQPISRTLAETYLRARGITSLHETGS LRFHPRCFFRPDEHSPTEIWPAIIAAVTDLNGELTGAHRTWLDPDGFNEATLGKAPVETPRRAMGNLLGSAVRFGLPGSV MAAGEGVETMLSLRCVLPTMPMAAALSAAHLAAIQFPDTLHRLYVARDDDPAGDVAVTTLMTRADEAGIETVILSPTLGD FNEDLRLLGHAALRTAIRVQIAPQDVARFMQHTA
Sequences:
>Translated_354_residues MMASLDASDLAARLAGQAEAVCRHYLSNGTRQGAYWLVGDVRNTPGRSMFVRLKGPQTGKGAAGKWTDAATGEHGDLLDV IRETCSLPDFKQIAEEARRFLSLPHPEPNREPRRGKTSAAPMGSSEAARRLFAMAQPISRTLAETYLRARGITSLHETGS LRFHPRCFFRPDEHSPTEIWPAIIAAVTDLNGELTGAHRTWLDPDGFNEATLGKAPVETPRRAMGNLLGSAVRFGLPGSV MAAGEGVETMLSLRCVLPTMPMAAALSAAHLAAIQFPDTLHRLYVARDDDPAGDVAVTTLMTRADEAGIETVILSPTLGD FNEDLRLLGHAALRTAIRVQIAPQDVARFMQHTA >Mature_354_residues MMASLDASDLAARLAGQAEAVCRHYLSNGTRQGAYWLVGDVRNTPGRSMFVRLKGPQTGKGAAGKWTDAATGEHGDLLDV IRETCSLPDFKQIAEEARRFLSLPHPEPNREPRRGKTSAAPMGSSEAARRLFAMAQPISRTLAETYLRARGITSLHETGS LRFHPRCFFRPDEHSPTEIWPAIIAAVTDLNGELTGAHRTWLDPDGFNEATLGKAPVETPRRAMGNLLGSAVRFGLPGSV MAAGEGVETMLSLRCVLPTMPMAAALSAAHLAAIQFPDTLHRLYVARDDDPAGDVAVTTLMTRADEAGIETVILSPTLGD FNEDLRLLGHAALRTAIRVQIAPQDVARFMQHTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38250; Mature: 38250
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMASLDASDLAARLAGQAEAVCRHYLSNGTRQGAYWLVGDVRNTPGRSMFVRLKGPQTGK CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCC GAAGKWTDAATGEHGDLLDVIRETCSLPDFKQIAEEARRFLSLPHPEPNREPRRGKTSAA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PMGSSEAARRLFAMAQPISRTLAETYLRARGITSLHETGSLRFHPRCFFRPDEHSPTEIW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEECCEEECCCCCCCCHHHH PAIIAAVTDLNGELTGAHRTWLDPDGFNEATLGKAPVETPRRAMGNLLGSAVRFGLPGSV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC MAAGEGVETMLSLRCVLPTMPMAAALSAAHLAAIQFPDTLHRLYVARDDDPAGDVAVTTL EECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCHHHHHHH MTRADEAGIETVILSPTLGDFNEDLRLLGHAALRTAIRVQIAPQDVARFMQHTA HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCC >Mature Secondary Structure MMASLDASDLAARLAGQAEAVCRHYLSNGTRQGAYWLVGDVRNTPGRSMFVRLKGPQTGK CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCC GAAGKWTDAATGEHGDLLDVIRETCSLPDFKQIAEEARRFLSLPHPEPNREPRRGKTSAA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PMGSSEAARRLFAMAQPISRTLAETYLRARGITSLHETGSLRFHPRCFFRPDEHSPTEIW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEECCEEECCCCCCCCHHHH PAIIAAVTDLNGELTGAHRTWLDPDGFNEATLGKAPVETPRRAMGNLLGSAVRFGLPGSV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC MAAGEGVETMLSLRCVLPTMPMAAALSAAHLAAIQFPDTLHRLYVARDDDPAGDVAVTTL EECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCHHHHHHH MTRADEAGIETVILSPTLGDFNEDLRLLGHAALRTAIRVQIAPQDVARFMQHTA HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA