Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110632893

Identifier: 110632893

GI number: 110632893

Start: 582715

End: 583638

Strand: Reverse

Name: 110632893

Synonym: Meso_0533

Alternate gene names: NA

Gene position: 583638-582715 (Counterclockwise)

Preceding gene: 110632894

Following gene: 110632891

Centisome position: 13.23

GC content: 64.5

Gene sequence:

>924_bases
ATGAGCGAGCATGACGAATTTGAGCCCGACCACATCTCTTCTCCCACCGAACACGTTCTGACCGAGCTTCAGCTCTACGG
CTTCCATCCCCGCGACGACGAACCCGATCCTCGACCAATCCCGGAAGATCGCGTGATCGCCGGCGCCGTCGCCGACATCT
TCGACGCGCTGATTGCCACCATGGCCGATACCGGTCTCGACGCAGATCTCGACGACCTGCTGTGGTCAACGGTCAACACC
TTCCACCGCGCCGTCGAACGGGTCGAACGCACACTCGACGACAACGAGCAGGCGCAGAAGCAGGGGCAGCGCGAACAGGA
CGGCTCCGAGGTGAAGGCCGTGCAGCTCGAAGCGCTGATCGCCACAGGCCAGCGGCTCATCGAACGCCGCGACGCCCTCG
AACTCCTCCGCGACACCGGCGCCGACCTCTACCGGAAGACGACCGGCTCGAACTGGTCTCCCCGCCACGGCTCACGCGTC
AACCATCGCCAGCTCACCTCTGCGATGATCGACAGCCGCGACTTCATCGCCGCGCGCAAACGCTCCGATCGCGAGGTGCT
GCTGCCCGCCGGACCGAAAATCGCGCTGACCGGCGGGCTCGACTTCAACGACCATCAACTGATCTGGGCCAAGCTCGACC
AGGTCCGCATGAAGCATCCCAACATGGTGCTGATGCACGGCAAATCTCCGAAAGGGGCCGAGAAAATCGCCGCCCGCTGG
GCCGACAACCGCGGCGTCGCGCAGATCGGTTTTGCCCCCGACTGGACCAGGCACGGCCGTTCAGCCCCGTTCAAGCGCAA
CGATCAGATGCTGGACGTGCTGCCAATCGGAGTCATCGTCTTCCCCGGCACCGGCATCCAGGACAACCTGGCCGACAAGG
CGAAGAAGCTCGGCATCCCTGTCTGGAGATTCGGCGGCGCGTGA

Upstream 100 bases:

>100_bases
CTGCGGCCCCTCGCTTCGCTCCGGGTGCCAGTCCAGCCCGTCCGACGGCTTCGTCGCCATGAAGGCCGCGGCGGTCGCGG
TCCAGCGAACGGAGCTTCCC

Downstream 100 bases:

>100_bases
GCGCCGCCTATCCCAAATCGACTTTCCAGAACTTCAGAACATTCTCGACCTCAGTCTTCGGATAATGAAGCAAATTGGCG
CTGGCGAGAGCGGACCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSEHDEFEPDHISSPTEHVLTELQLYGFHPRDDEPDPRPIPEDRVIAGAVADIFDALIATMADTGLDADLDDLLWSTVNT
FHRAVERVERTLDDNEQAQKQGQREQDGSEVKAVQLEALIATGQRLIERRDALELLRDTGADLYRKTTGSNWSPRHGSRV
NHRQLTSAMIDSRDFIAARKRSDREVLLPAGPKIALTGGLDFNDHQLIWAKLDQVRMKHPNMVLMHGKSPKGAEKIAARW
ADNRGVAQIGFAPDWTRHGRSAPFKRNDQMLDVLPIGVIVFPGTGIQDNLADKAKKLGIPVWRFGGA

Sequences:

>Translated_307_residues
MSEHDEFEPDHISSPTEHVLTELQLYGFHPRDDEPDPRPIPEDRVIAGAVADIFDALIATMADTGLDADLDDLLWSTVNT
FHRAVERVERTLDDNEQAQKQGQREQDGSEVKAVQLEALIATGQRLIERRDALELLRDTGADLYRKTTGSNWSPRHGSRV
NHRQLTSAMIDSRDFIAARKRSDREVLLPAGPKIALTGGLDFNDHQLIWAKLDQVRMKHPNMVLMHGKSPKGAEKIAARW
ADNRGVAQIGFAPDWTRHGRSAPFKRNDQMLDVLPIGVIVFPGTGIQDNLADKAKKLGIPVWRFGGA
>Mature_306_residues
SEHDEFEPDHISSPTEHVLTELQLYGFHPRDDEPDPRPIPEDRVIAGAVADIFDALIATMADTGLDADLDDLLWSTVNTF
HRAVERVERTLDDNEQAQKQGQREQDGSEVKAVQLEALIATGQRLIERRDALELLRDTGADLYRKTTGSNWSPRHGSRVN
HRQLTSAMIDSRDFIAARKRSDREVLLPAGPKIALTGGLDFNDHQLIWAKLDQVRMKHPNMVLMHGKSPKGAEKIAARWA
DNRGVAQIGFAPDWTRHGRSAPFKRNDQMLDVLPIGVIVFPGTGIQDNLADKAKKLGIPVWRFGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34321; Mature: 34190

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHDEFEPDHISSPTEHVLTELQLYGFHPRDDEPDPRPIPEDRVIAGAVADIFDALIAT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MADTGLDADLDDLLWSTVNTFHRAVERVERTLDDNEQAQKQGQREQDGSEVKAVQLEALI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHH
ATGQRLIERRDALELLRDTGADLYRKTTGSNWSPRHGSRVNHRQLTSAMIDSRDFIAARK
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHC
RSDREVLLPAGPKIALTGGLDFNDHQLIWAKLDQVRMKHPNMVLMHGKSPKGAEKIAARW
CCCCEEEECCCCEEEEECCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
ADNRGVAQIGFAPDWTRHGRSAPFKRNDQMLDVLPIGVIVFPGTGIQDNLADKAKKLGIP
CCCCCEEEECCCCCHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCC
VWRFGGA
CEECCCC
>Mature Secondary Structure 
SEHDEFEPDHISSPTEHVLTELQLYGFHPRDDEPDPRPIPEDRVIAGAVADIFDALIAT
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MADTGLDADLDDLLWSTVNTFHRAVERVERTLDDNEQAQKQGQREQDGSEVKAVQLEALI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHH
ATGQRLIERRDALELLRDTGADLYRKTTGSNWSPRHGSRVNHRQLTSAMIDSRDFIAARK
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHC
RSDREVLLPAGPKIALTGGLDFNDHQLIWAKLDQVRMKHPNMVLMHGKSPKGAEKIAARW
CCCCEEEECCCCEEEEECCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
ADNRGVAQIGFAPDWTRHGRSAPFKRNDQMLDVLPIGVIVFPGTGIQDNLADKAKKLGIP
CCCCCEEEECCCCCHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCC
VWRFGGA
CEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA