| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632872
Identifier: 110632872
GI number: 110632872
Start: 565356
End: 567863
Strand: Reverse
Name: 110632872
Synonym: Meso_0512
Alternate gene names: NA
Gene position: 567863-565356 (Counterclockwise)
Preceding gene: 110632873
Following gene: 110632869
Centisome position: 12.87
GC content: 61.48
Gene sequence:
>2508_bases ATGGCTAGTCCCATCCAGATCGTCCTCAATCCTGAAAACTATGAGGAAGCGCGTGACGCTGGTGGTGGAGGCGGTCGGAA GGACTTCTTTGCCCACCGCGATGCGGAGTTCACCGCCCATCGCGCCGCGCTGATGGGCCAAATCGACACGATTGCTGGCG TTCTCAGCGCGCAAGCACAGGGCGATATCGGCTTCGTGAAGGTTATTCTTCGTCGTGAGGCTTGGGCTAAAAGCCATCGC CCGATCGCCAGCCTGTTTCGGCACGATCGCACCCCTGTAGTTGGCGGCGGAGATCTCGGAGTTATGCTCGTCGAAGCCCG GCCTGGCACGCTGCGCCAGGTGGCAGCAGAGATTGCCAAGGCCGAAACCCACACCGAAATGCGCTTCAACGAGCAAAAGC AGAAGGACGAACCTTATCCGTCTGCCCGAAAGAGCGAGGTCGGTGCCATCGACCGGATCGAACTCTATGGGCCAAGTGAT CGGCGCAGCTTCTCGGTCGATGAGGCTGTAGCGTGGCTCTCCAATCCGATGACGGGCAGCAGCTATCAAGTCGAGCTGTT TGATAGCCCGCCGCCGCGCTCGGAGTGGGACCGCCTCGACCTGAGCCATCGGCGCCTAGTCGAGAGCTTCGTTGCCGGCT TCGCCGCACTAGATCGCGGCCTCGTCGTCGAGCGTTTGCCGAACCGTCGCCACAAACAGCCGATCCTCTCTGTCCGACTG GATCAGTCCGGAGATCAGCCGGTTCTGCGGCTGAATGATGCCCCGGTCAGCGAACGGCGGCGCGAGCTTGCCGCATTCAA TCCCGACGTGGGTCGACACCTCCGGCTGCTCGCCTTCCTTGACAGCCATCCGCTTGTGCGCCGGATCGAACTTCCTGGCA TCGTCGTGCGGGCCGCAAGACCCAGCACGGCAGTCGCCCGCGCACGGCCTACCGATGTCACTATTCCCGTCCGAGACAGC CGCCGCAGTCATCCCCGGCTTGGGATCATCGACGGCGGAATCGGCGAAGCACTGTCAGACTGGATCATCGACCGGTGGGA CGTTCTCGCAGAGGAAGATACCGACCTTGCGCATGGGACGTTCATCGGCGGATTGGCCGCACTGGGCGGCGCGCTTAACG GCGCGGAGATTTGCCCCGAGCCCGACGGCGCGGAGTTGGTCGACGTTGCAGTCTTCCCGAACGAACGCAAAGCCGGAGCT TTTGCGTCCTATTATCCCGATGGCTTGCCGCAATTCTTCGACGAAATGGAGACAGCCATTTCGGACGCTCGCGCTCGACA TGGGGTGCGCGTGTTCAACATGAGCCTGAACATCCTTCAGCCTGCGGCACCAGATCGTTACAGTCCCCACGCAGCGCGGC TTGACCAGATCGCTGAGAGCAACAACGCCATCGTTTTCATTTCAGCTGGCAACATACAACCGCAAGACCTGCGCCCTGAA TGGCCTGCTGACGCCACGGCGGCGCTCGGCAACCTTGCCACCGCACGCAACGACGGCCTCCTTACGCCGGCCGAGAGCGC GCGCAACGTCGCTGTGGGAGCTCTCAACCCGCCAGGCCATGATGGATGCCTTCCGTTCGCTCCGACGCGCTACAGCCGAC GTGGCCCCGGACTGCGCGCAGGTGTTAAGCCCGACTTGGCTCACATCGGTGGCGCAGGGTCCCAGCACCCTAAACTTGGC CACGGGCTCTTCTCGATCCTGCCCGACGGCACCATCGTCGATGGCTGCGGAACTAGCTATGCCGCGCCCCTTGCCGCGAA GACCGCCGCTGTCCTGGATCACGCTATTGAGGGCGAGGTCTCTCGTGAAACCCTGATCGGTCTGCTTGTTCACCATGCCG AAATGCCGACCCTTTTGCAGGACAAGGCGCTGGCGCCTATCGCCAAACATATGGTCGGATTCGGAATGCCGCCTTCGGCC GATCGCATCCTGGAAACGGGCGACCACACGATTACTCTAGTTTTCGCATCGCGCATCCAACGTGACCAACAGATCAACTT CCGTTTCCAATGGCCGGCGTCACTGGTCGGCCCCGAAGGCAAGTGCCGTGGTCGAGCAAAGATCACGCTCGTCTCCACCC CCCCGCTCGACGCCCGTTTTGGATCGGAGTTCGTTCGGGTCAACATCAACGCTGTCCTCCAGCAGGAACAAGCCAATGGC GGGTGGAAAGGACGGCTTGAACCACTTTATCTCCCGTCACGGCGGGAGGCTCCTCCGATTGAGGCGGAGCGCATCGAACA TGACCTCAAATGGAGCCCGGTAAAGGTCTTGGCGAAAACCTTCCCTCAGGGCGTGGGTCCCTCGTCGAACTGGCGTCTCT TCGTTGAATACTTGACGCGCGCGGGCGAGGTCATGCCCGAAGAAGGCGTGCCCTTCACAGTGATCGTGACCATCAGTGAT CCAGACGCCGAGCAACCGGTTTTCAACGATATGCGTCAAAATCTGCAGGCTCTTGGCATCCAGATCGCCGATATCCGTAC CGCAGCGCGTATTACTTCCCGGGTTTAA
Upstream 100 bases:
>100_bases TTCTCAATGGCCGACATCGGTGAGATTGCCGGCAAGGACAAATCGACGGTCAGTCGTCAGCTCGGCCGCGCGGCCAAGTC TGGCGAGGCGGAGACGCTAA
Downstream 100 bases:
>100_bases CCGACGATGGGCGGCTCTTTATCGACCGCGTCATCGCATGGCTCCCGCGATCGTCAAAGCACAGCGATCGGCGCGGTCAC GGATCATGTTGGCAAACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MASPIQIVLNPENYEEARDAGGGGGRKDFFAHRDAEFTAHRAALMGQIDTIAGVLSAQAQGDIGFVKVILRREAWAKSHR PIASLFRHDRTPVVGGGDLGVMLVEARPGTLRQVAAEIAKAETHTEMRFNEQKQKDEPYPSARKSEVGAIDRIELYGPSD RRSFSVDEAVAWLSNPMTGSSYQVELFDSPPPRSEWDRLDLSHRRLVESFVAGFAALDRGLVVERLPNRRHKQPILSVRL DQSGDQPVLRLNDAPVSERRRELAAFNPDVGRHLRLLAFLDSHPLVRRIELPGIVVRAARPSTAVARARPTDVTIPVRDS RRSHPRLGIIDGGIGEALSDWIIDRWDVLAEEDTDLAHGTFIGGLAALGGALNGAEICPEPDGAELVDVAVFPNERKAGA FASYYPDGLPQFFDEMETAISDARARHGVRVFNMSLNILQPAAPDRYSPHAARLDQIAESNNAIVFISAGNIQPQDLRPE WPADATAALGNLATARNDGLLTPAESARNVAVGALNPPGHDGCLPFAPTRYSRRGPGLRAGVKPDLAHIGGAGSQHPKLG HGLFSILPDGTIVDGCGTSYAAPLAAKTAAVLDHAIEGEVSRETLIGLLVHHAEMPTLLQDKALAPIAKHMVGFGMPPSA DRILETGDHTITLVFASRIQRDQQINFRFQWPASLVGPEGKCRGRAKITLVSTPPLDARFGSEFVRVNINAVLQQEQANG GWKGRLEPLYLPSRREAPPIEAERIEHDLKWSPVKVLAKTFPQGVGPSSNWRLFVEYLTRAGEVMPEEGVPFTVIVTISD PDAEQPVFNDMRQNLQALGIQIADIRTAARITSRV
Sequences:
>Translated_835_residues MASPIQIVLNPENYEEARDAGGGGGRKDFFAHRDAEFTAHRAALMGQIDTIAGVLSAQAQGDIGFVKVILRREAWAKSHR PIASLFRHDRTPVVGGGDLGVMLVEARPGTLRQVAAEIAKAETHTEMRFNEQKQKDEPYPSARKSEVGAIDRIELYGPSD RRSFSVDEAVAWLSNPMTGSSYQVELFDSPPPRSEWDRLDLSHRRLVESFVAGFAALDRGLVVERLPNRRHKQPILSVRL DQSGDQPVLRLNDAPVSERRRELAAFNPDVGRHLRLLAFLDSHPLVRRIELPGIVVRAARPSTAVARARPTDVTIPVRDS RRSHPRLGIIDGGIGEALSDWIIDRWDVLAEEDTDLAHGTFIGGLAALGGALNGAEICPEPDGAELVDVAVFPNERKAGA FASYYPDGLPQFFDEMETAISDARARHGVRVFNMSLNILQPAAPDRYSPHAARLDQIAESNNAIVFISAGNIQPQDLRPE WPADATAALGNLATARNDGLLTPAESARNVAVGALNPPGHDGCLPFAPTRYSRRGPGLRAGVKPDLAHIGGAGSQHPKLG HGLFSILPDGTIVDGCGTSYAAPLAAKTAAVLDHAIEGEVSRETLIGLLVHHAEMPTLLQDKALAPIAKHMVGFGMPPSA DRILETGDHTITLVFASRIQRDQQINFRFQWPASLVGPEGKCRGRAKITLVSTPPLDARFGSEFVRVNINAVLQQEQANG GWKGRLEPLYLPSRREAPPIEAERIEHDLKWSPVKVLAKTFPQGVGPSSNWRLFVEYLTRAGEVMPEEGVPFTVIVTISD PDAEQPVFNDMRQNLQALGIQIADIRTAARITSRV >Mature_834_residues ASPIQIVLNPENYEEARDAGGGGGRKDFFAHRDAEFTAHRAALMGQIDTIAGVLSAQAQGDIGFVKVILRREAWAKSHRP IASLFRHDRTPVVGGGDLGVMLVEARPGTLRQVAAEIAKAETHTEMRFNEQKQKDEPYPSARKSEVGAIDRIELYGPSDR RSFSVDEAVAWLSNPMTGSSYQVELFDSPPPRSEWDRLDLSHRRLVESFVAGFAALDRGLVVERLPNRRHKQPILSVRLD QSGDQPVLRLNDAPVSERRRELAAFNPDVGRHLRLLAFLDSHPLVRRIELPGIVVRAARPSTAVARARPTDVTIPVRDSR RSHPRLGIIDGGIGEALSDWIIDRWDVLAEEDTDLAHGTFIGGLAALGGALNGAEICPEPDGAELVDVAVFPNERKAGAF ASYYPDGLPQFFDEMETAISDARARHGVRVFNMSLNILQPAAPDRYSPHAARLDQIAESNNAIVFISAGNIQPQDLRPEW PADATAALGNLATARNDGLLTPAESARNVAVGALNPPGHDGCLPFAPTRYSRRGPGLRAGVKPDLAHIGGAGSQHPKLGH GLFSILPDGTIVDGCGTSYAAPLAAKTAAVLDHAIEGEVSRETLIGLLVHHAEMPTLLQDKALAPIAKHMVGFGMPPSAD RILETGDHTITLVFASRIQRDQQINFRFQWPASLVGPEGKCRGRAKITLVSTPPLDARFGSEFVRVNINAVLQQEQANGG WKGRLEPLYLPSRREAPPIEAERIEHDLKWSPVKVLAKTFPQGVGPSSNWRLFVEYLTRAGEVMPEEGVPFTVIVTISDP DAEQPVFNDMRQNLQALGIQIADIRTAARITSRV
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90944; Mature: 90813
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPIQIVLNPENYEEARDAGGGGGRKDFFAHRDAEFTAHRAALMGQIDTIAGVLSAQAQ CCCCEEEEECCCCHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GDIGFVKVILRREAWAKSHRPIASLFRHDRTPVVGGGDLGVMLVEARPGTLRQVAAEIAK CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHH AETHTEMRFNEQKQKDEPYPSARKSEVGAIDRIELYGPSDRRSFSVDEAVAWLSNPMTGS HHHHHHHHHCHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC SYQVELFDSPPPRSEWDRLDLSHRRLVESFVAGFAALDRGLVVERLPNRRHKQPILSVRL CEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEE DQSGDQPVLRLNDAPVSERRRELAAFNPDVGRHLRLLAFLDSHPLVRRIELPGIVVRAAR CCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHEEEEHHHCCCCCEEEECCCCEEEEECC PSTAVARARPTDVTIPVRDSRRSHPRLGIIDGGIGEALSDWIIDRWDVLAEEDTDLAHGT CCHHHHCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHH FIGGLAALGGALNGAEICPEPDGAELVDVAVFPNERKAGAFASYYPDGLPQFFDEMETAI HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHH SDARARHGVRVFNMSLNILQPAAPDRYSPHAARLDQIAESNNAIVFISAGNIQPQDLRPE HHHHHHCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC WPADATAALGNLATARNDGLLTPAESARNVAVGALNPPGHDGCLPFAPTRYSRRGPGLRA CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GVKPDLAHIGGAGSQHPKLGHGLFSILPDGTIVDGCGTSYAAPLAAKTAAVLDHAIEGEV CCCCCHHHCCCCCCCCCCHHCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCC SRETLIGLLVHHAEMPTLLQDKALAPIAKHMVGFGMPPSADRILETGDHTITLVFASRIQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEHHHC RDQQINFRFQWPASLVGPEGKCRGRAKITLVSTPPLDARFGSEFVRVNINAVLQQEQANG CCCEEEEEEECCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHHEEHHHCCC GWKGRLEPLYLPSRREAPPIEAERIEHDLKWSPVKVLAKTFPQGVGPSSNWRLFVEYLTR CCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH AGEVMPEEGVPFTVIVTISDPDAEQPVFNDMRQNLQALGIQIADIRTAARITSRV CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHCC >Mature Secondary Structure ASPIQIVLNPENYEEARDAGGGGGRKDFFAHRDAEFTAHRAALMGQIDTIAGVLSAQAQ CCCEEEEECCCCHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GDIGFVKVILRREAWAKSHRPIASLFRHDRTPVVGGGDLGVMLVEARPGTLRQVAAEIAK CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHH AETHTEMRFNEQKQKDEPYPSARKSEVGAIDRIELYGPSDRRSFSVDEAVAWLSNPMTGS HHHHHHHHHCHHHHCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC SYQVELFDSPPPRSEWDRLDLSHRRLVESFVAGFAALDRGLVVERLPNRRHKQPILSVRL CEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEE DQSGDQPVLRLNDAPVSERRRELAAFNPDVGRHLRLLAFLDSHPLVRRIELPGIVVRAAR CCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHEEEEHHHCCCCCEEEECCCCEEEEECC PSTAVARARPTDVTIPVRDSRRSHPRLGIIDGGIGEALSDWIIDRWDVLAEEDTDLAHGT CCHHHHCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHH FIGGLAALGGALNGAEICPEPDGAELVDVAVFPNERKAGAFASYYPDGLPQFFDEMETAI HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHH SDARARHGVRVFNMSLNILQPAAPDRYSPHAARLDQIAESNNAIVFISAGNIQPQDLRPE HHHHHHCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC WPADATAALGNLATARNDGLLTPAESARNVAVGALNPPGHDGCLPFAPTRYSRRGPGLRA CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GVKPDLAHIGGAGSQHPKLGHGLFSILPDGTIVDGCGTSYAAPLAAKTAAVLDHAIEGEV CCCCCHHHCCCCCCCCCCHHCCHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCC SRETLIGLLVHHAEMPTLLQDKALAPIAKHMVGFGMPPSADRILETGDHTITLVFASRIQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEEHHHC RDQQINFRFQWPASLVGPEGKCRGRAKITLVSTPPLDARFGSEFVRVNINAVLQQEQANG CCCEEEEEEECCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHHEEHHHCCC GWKGRLEPLYLPSRREAPPIEAERIEHDLKWSPVKVLAKTFPQGVGPSSNWRLFVEYLTR CCCCCCCCEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH AGEVMPEEGVPFTVIVTISDPDAEQPVFNDMRQNLQALGIQIADIRTAARITSRV CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA