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The map label for this gene is 110632868

Identifier: 110632868

GI number: 110632868

Start: 562197

End: 562529

Strand: Reverse

Name: 110632868

Synonym: Meso_0508

Alternate gene names: NA

Gene position: 562529-562197 (Counterclockwise)

Preceding gene: 110632869

Following gene: 110632867

Centisome position: 12.75

GC content: 65.77

Gene sequence:

>333_bases
ATGATCCAACCTATCGCGCGCGGCCATCAGCGCCTCGCAACCGCCGCCACGGCGCTGACCCTGAGCTTTCTTCTGGCGCC
CGCCGCCCATGCATCCGGCTCCTCGATGCCCTGGGAAGCGCCGCTGCAGTCCATCCTGCAGTCGATCGAGGGGCCGGTCG
CCAAGATCATCGCGGTGATCATCATCATCGTCACCGGCCTGACACTGGCGTTCGGCGACACGAGCGGAGGATTTCGGCGC
CTCATCCAGATCGTCTTCGGCCTGTCGATCGCCTTCGCGGCGTCCAGCTTCTTCCTGTCGTTCTTCTCGTTCGGCGGCGG
GGCGCTCGTCTGA

Upstream 100 bases:

>100_bases
GGCGTCTCGCCGAACTCGCGCGCGTCGAAGGGCTCGGGACGGACACCGACTACCGCCTTTCCCCCGCAACCCAGCCTCCC
GACCCACAAGGAGAACCCGC

Downstream 100 bases:

>100_bases
TGGCGGGCCTCCTGCATCATCCCGATGAAGTCGCGGGCTTCTCGGTTCCGGTCCACCGCGCGCTGACCGAGCAGATCCTG
CTGGGCGGCGCACCGCGCAG

Product: conjugal transfer protein TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIQPIARGHQRLATAATALTLSFLLAPAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV

Sequences:

>Translated_110_residues
MIQPIARGHQRLATAATALTLSFLLAPAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV
>Mature_110_residues
MIQPIARGHQRLATAATALTLSFLLAPAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11391; Mature: 11391

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQPIARGHQRLATAATALTLSFLLAPAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
IIIVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIQPIARGHQRLATAATALTLSFLLAPAAHASGSSMPWEAPLQSILQSIEGPVAKIIAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
IIIVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA