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The map label for this gene is tagH [H]

Identifier: 110632850

GI number: 110632850

Start: 544754

End: 545527

Strand: Reverse

Name: tagH [H]

Synonym: Meso_0490

Alternate gene names: 110632850

Gene position: 545527-544754 (Counterclockwise)

Preceding gene: 110632851

Following gene: 110632849

Centisome position: 12.36

GC content: 55.94

Gene sequence:

>774_bases
ATGGCCAGGATCAACATCAGGAACGCCAGCGTCAGTTACTTTCTCAGAAAGTCTGGCGCCAAGGTAAAAAGTCTGGAGCG
CGGCGCAGTCGGTGCGCAAATCGTGGCTGGGAGGCGTTATCTTGAAATAACGGCGCTGAAGAACATCACGCTATCGCTCA
ACGATGGCGATCGCGTCGGTCTTGTCGGCATCAACGGCTCGGGGAAATCAACCCTGCTAAAGCTCTGCGCTGGCGCGCTC
GCCGCGCAATCCGGAACGGTGGCAATCGAAGGCAGGGTGAGCCCGCAATTCGCACTCGGATCAGGCATGAAACCGGCGCT
GACGGGGCGGCAGAATACGGAGCTGAAATGCCTCTATATGGGTGTGCCGCAGAGCGCAATCGCCGCCCATGTGGAAGAGG
TGAAAGCGCTTTCCGGGCTCGGCGGGTATTTTGAGTTGCCAATACAAAGCTATTCGGCCGGAATGCGGTCACGACTCGTG
ATGAGTCTGCTGCGTCTGGTGCGCGGCGAAATTTTGATCATGGATGAGTGGATAAATGCAGCCGATCCCTCGCTTAGCAC
CAAGGTAAGCGGTTTGCAGGCACAGCTAGTGGAAAGGGCAAAGATCCTCTTGCTCGCCAGCCACTCACGCCGTGTCCTTG
AGGAATGGGTGGATACTCTTGCATGGCTCGATCAAGGCGAAATTCTTGCATTAGGCAGAGTAGGTGAGGTGTATCCTGAA
TACCAGACGTGGATGAAAACCCGGAAGATAGAGCGACAGAACTCACCGACTTGA

Upstream 100 bases:

>100_bases
AGGCGTGGCTTATTGCGGCCATTCTGTCAGTTATTGTTTGCGTGGCAGCTTACATCGCCTATCACCATTCCCAGGCCTTT
GTGAGGAATCTGAAATAGCC

Downstream 100 bases:

>100_bases
ATTCTGGGCTGCGATGAGGCGAGCACCGGCTCGGCAGACTATTTCAGTTTGCGGTTTCGGATCGAAGCTGAAATGAGAAG
CTCACTTTGTGCAAATGTGA

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MARINIRNASVSYFLRKSGAKVKSLERGAVGAQIVAGRRYLEITALKNITLSLNDGDRVGLVGINGSGKSTLLKLCAGAL
AAQSGTVAIEGRVSPQFALGSGMKPALTGRQNTELKCLYMGVPQSAIAAHVEEVKALSGLGGYFELPIQSYSAGMRSRLV
MSLLRLVRGEILIMDEWINAADPSLSTKVSGLQAQLVERAKILLLASHSRRVLEEWVDTLAWLDQGEILALGRVGEVYPE
YQTWMKTRKIERQNSPT

Sequences:

>Translated_257_residues
MARINIRNASVSYFLRKSGAKVKSLERGAVGAQIVAGRRYLEITALKNITLSLNDGDRVGLVGINGSGKSTLLKLCAGAL
AAQSGTVAIEGRVSPQFALGSGMKPALTGRQNTELKCLYMGVPQSAIAAHVEEVKALSGLGGYFELPIQSYSAGMRSRLV
MSLLRLVRGEILIMDEWINAADPSLSTKVSGLQAQLVERAKILLLASHSRRVLEEWVDTLAWLDQGEILALGRVGEVYPE
YQTWMKTRKIERQNSPT
>Mature_256_residues
ARINIRNASVSYFLRKSGAKVKSLERGAVGAQIVAGRRYLEITALKNITLSLNDGDRVGLVGINGSGKSTLLKLCAGALA
AQSGTVAIEGRVSPQFALGSGMKPALTGRQNTELKCLYMGVPQSAIAAHVEEVKALSGLGGYFELPIQSYSAGMRSRLVM
SLLRLVRGEILIMDEWINAADPSLSTKVSGLQAQLVERAKILLLASHSRRVLEEWVDTLAWLDQGEILALGRVGEVYPEY
QTWMKTRKIERQNSPT

Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27436953, Length=196, Percent_Identity=24.4897959183673, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI153792144, Length=204, Percent_Identity=24.0196078431373, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI150417984, Length=201, Percent_Identity=27.363184079602, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI48994943, Length=210, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789751, Length=224, Percent_Identity=29.4642857142857, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=23.7209302325581, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=23.3333333333333, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787792, Length=216, Percent_Identity=27.3148148148148, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=25, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786398, Length=226, Percent_Identity=24.3362831858407, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=216, Percent_Identity=23.1481481481481, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221512771, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24643674, Length=209, Percent_Identity=23.444976076555, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648314, Length=203, Percent_Identity=26.1083743842365, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=237, Percent_Identity=25.3164556962025, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015860
- InterPro:   IPR003593
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00005 ABC_tran; PF01476 LysM [H]

EC number: =3.6.3.40 [H]

Molecular weight: Translated: 27869; Mature: 27738

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARINIRNASVSYFLRKSGAKVKSLERGAVGAQIVAGRRYLEITALKNITLSLNDGDRVG
CCEEEECCCHHHHHHHHCCCHHHHHHCCCCCCEEECCCEEEEEEEEEEEEEEECCCCEEE
LVGINGSGKSTLLKLCAGALAAQSGTVAIEGRVSPQFALGSGMKPALTGRQNTELKCLYM
EEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEE
GVPQSAIAAHVEEVKALSGLGGYFELPIQSYSAGMRSRLVMSLLRLVRGEILIMDEWINA
CCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
ADPSLSTKVSGLQAQLVERAKILLLASHSRRVLEEWVDTLAWLDQGEILALGRVGEVYPE
CCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
YQTWMKTRKIERQNSPT
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARINIRNASVSYFLRKSGAKVKSLERGAVGAQIVAGRRYLEITALKNITLSLNDGDRVG
CEEEECCCHHHHHHHHCCCHHHHHHCCCCCCEEECCCEEEEEEEEEEEEEEECCCCEEE
LVGINGSGKSTLLKLCAGALAAQSGTVAIEGRVSPQFALGSGMKPALTGRQNTELKCLYM
EEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEEE
GVPQSAIAAHVEEVKALSGLGGYFELPIQSYSAGMRSRLVMSLLRLVRGEILIMDEWINA
CCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
ADPSLSTKVSGLQAQLVERAKILLLASHSRRVLEEWVDTLAWLDQGEILALGRVGEVYPE
CCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH
YQTWMKTRKIERQNSPT
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]