Click here to switch to the map view.

The map label for this gene is wcaA [C]

Identifier: 110632849

GI number: 110632849

Start: 541828

End: 543657

Strand: Reverse

Name: wcaA [C]

Synonym: Meso_0488

Alternate gene names: 110632849

Gene position: 543657-541828 (Counterclockwise)

Preceding gene: 110632850

Following gene: 110632848

Centisome position: 12.32

GC content: 54.1

Gene sequence:

>1830_bases
ATGCGATTGCTTCCCATGAAGTTACGGCGAGCACTCATCAACAGAATACCTCCAGGCATGCGGCCCCTCGTGAGGCGCCT
CTACGAAAAGTTGCCGCGTAAGGGTGGGCTCGCGGCACGACGCATCCGCCAGCACAGATTTCGCATGCTGAATCTTGGAT
ACCTTGAGCGCGGCTACCGCGAGCTCGCGCACTTGGCAGAGAGTTCCAGGAGTCGGGAGATAAGACGTCGCGCTTGCTGG
GAACTCATCAGTTGGCACACCGGACAAATTTCCATTGAGGATGCGAGAAAGGTTCTTAGTTACGCCGACATGCTGAAGCG
CGTTGAGTGGCGGCGCGGTCGGCTGATCCACTTGGCAACAGCACGATCTACCGCACTGTGCACACTTGGGAACTTGGCAG
AAGCGGCTCGAAGCTTTGAAGACCCCTCGCTCTCGCAATCACATCCCGACTTCATTCTGGCACGTAGTGGTCTTATTGAC
GAACTGGACGGGCGTTTGGCCGCGGTCAACCAGGTTCTACAACAGGAAAAACTTAGTGCTGTGAGGCTTTTACCTGGATC
AGAGCCTGCCTTCGACCGATTGACCACGGGCTTGCGGCCGGAAGCCGATCAAAGCGGGCGCCCGTTGGTGTCGGTGATCG
TACCCGCGTACAATGCACAATACACCATTGCTACTGCCATCCGCTCCCTGCAGGAGCAGACCTGGCGCAATATTGAAATC
CTTGTAGTCGATGACTGCAGCACTGACGAGACGGTGTCGATTGTAACTAAGCTTGCAAACAAGGATTCTCGCATTCAGGT
GCTCCGTATGGAGCGGAACTCTGGAGCTTACTGTGCACGCAATCTGGGTTTGAAGAACGCTAGAGGAAAGTATGTGACGT
GTCACGACTCAGATGACTGGTCTCATCCTGAGAAATTGCAAATTCAAGCAGAGCACCTCGAAAGGCACACTGATAGAATT
GTAGCGAATTACTCATATTTGTATTTCGTTGATGACGATTTACGTGTTCGAGCGCGCCGCCTCGGATCATATCTTCGGCT
GAACACGTCCTCTCTCATGTTCAGGCGCGAGCCGGTTCTTTCGGAACTTGGGTTTTGGGACGAGGTGCGATTTGCAGCGG
ATAGCGAATTTTTGGAGAGGCTGTATGCGGTTTTTGGACGGATATCCGTTATCAGCATCGCCAAGCCATTGTCGCTGGTT
CGATATCGGGAAGACAGTCTTACCGCGTCTAAAGCGTTCGGCTACCATGGTTTTCGCATGGGTGCTCGTCAATTTTATCG
GGAGCGGTACTTGCGATTTCATCGCTCAGGGCTGCCGCTCCGATTCAGAGGAAATGCGCAAGACCGGCCATTCTACGTTC
CTGAACCTATGCTGCCGGCGCGATCGCCCCGAGGAGCTAGGCGCTATTTTGATGTTGTTCTTGTTCTTGATTGCAGGCTT
GGTGGACGCGAACTGAGGAATGCAGTTTCCGTCCTGCAAAGCTACCGGCGTCAGGGCATGTCGGTAGCAGTTTTCCACCT
TCCGATTTTCGAGCTCGACCCGGAAAAGCCGATACAAGAGGCACTAATTGCCGCCCTGGATGCCGGGTTGTTTCAGTATG
TGGTGACGGGCGAACAGGTCGATTGCGAAAAGCTGCAAATACTGGGCTGGCGGCCATTACGGGACTATAATCGCTTCTTC
CTCGATGTAAGCGCCAAAACGATCGAGGTGACCACAACGAGAAGCGACATATTCCACAAAGCGCCCACTGCGCGTGAACG
CGAAATCTGCGAGGCAACCCTGCGCCGTTATTGTGATGCACCGGTGACATGGCGCGATTTACGACAGTGA

Upstream 100 bases:

>100_bases
AACGCCGATAGCCAAACGGATCGACATGGATTCCGCAACATATCTCCTGAAGACATGCACTGAGGGCGCTAAATCACGTT
GGCAAAGCCTACGTGACGGC

Downstream 100 bases:

>100_bases
TTTTGCACCTGTTGTCCAGCTTTATGTTGCCTGGAGAAAGCAGCTGTCGTAGTCACCACTCCGAAATTGTGGATTTGTGC
CCCTCACGGCCGGAATCCCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MRLLPMKLRRALINRIPPGMRPLVRRLYEKLPRKGGLAARRIRQHRFRMLNLGYLERGYRELAHLAESSRSREIRRRACW
ELISWHTGQISIEDARKVLSYADMLKRVEWRRGRLIHLATARSTALCTLGNLAEAARSFEDPSLSQSHPDFILARSGLID
ELDGRLAAVNQVLQQEKLSAVRLLPGSEPAFDRLTTGLRPEADQSGRPLVSVIVPAYNAQYTIATAIRSLQEQTWRNIEI
LVVDDCSTDETVSIVTKLANKDSRIQVLRMERNSGAYCARNLGLKNARGKYVTCHDSDDWSHPEKLQIQAEHLERHTDRI
VANYSYLYFVDDDLRVRARRLGSYLRLNTSSLMFRREPVLSELGFWDEVRFAADSEFLERLYAVFGRISVISIAKPLSLV
RYREDSLTASKAFGYHGFRMGARQFYRERYLRFHRSGLPLRFRGNAQDRPFYVPEPMLPARSPRGARRYFDVVLVLDCRL
GGRELRNAVSVLQSYRRQGMSVAVFHLPIFELDPEKPIQEALIAALDAGLFQYVVTGEQVDCEKLQILGWRPLRDYNRFF
LDVSAKTIEVTTTRSDIFHKAPTAREREICEATLRRYCDAPVTWRDLRQ

Sequences:

>Translated_609_residues
MRLLPMKLRRALINRIPPGMRPLVRRLYEKLPRKGGLAARRIRQHRFRMLNLGYLERGYRELAHLAESSRSREIRRRACW
ELISWHTGQISIEDARKVLSYADMLKRVEWRRGRLIHLATARSTALCTLGNLAEAARSFEDPSLSQSHPDFILARSGLID
ELDGRLAAVNQVLQQEKLSAVRLLPGSEPAFDRLTTGLRPEADQSGRPLVSVIVPAYNAQYTIATAIRSLQEQTWRNIEI
LVVDDCSTDETVSIVTKLANKDSRIQVLRMERNSGAYCARNLGLKNARGKYVTCHDSDDWSHPEKLQIQAEHLERHTDRI
VANYSYLYFVDDDLRVRARRLGSYLRLNTSSLMFRREPVLSELGFWDEVRFAADSEFLERLYAVFGRISVISIAKPLSLV
RYREDSLTASKAFGYHGFRMGARQFYRERYLRFHRSGLPLRFRGNAQDRPFYVPEPMLPARSPRGARRYFDVVLVLDCRL
GGRELRNAVSVLQSYRRQGMSVAVFHLPIFELDPEKPIQEALIAALDAGLFQYVVTGEQVDCEKLQILGWRPLRDYNRFF
LDVSAKTIEVTTTRSDIFHKAPTAREREICEATLRRYCDAPVTWRDLRQ
>Mature_609_residues
MRLLPMKLRRALINRIPPGMRPLVRRLYEKLPRKGGLAARRIRQHRFRMLNLGYLERGYRELAHLAESSRSREIRRRACW
ELISWHTGQISIEDARKVLSYADMLKRVEWRRGRLIHLATARSTALCTLGNLAEAARSFEDPSLSQSHPDFILARSGLID
ELDGRLAAVNQVLQQEKLSAVRLLPGSEPAFDRLTTGLRPEADQSGRPLVSVIVPAYNAQYTIATAIRSLQEQTWRNIEI
LVVDDCSTDETVSIVTKLANKDSRIQVLRMERNSGAYCARNLGLKNARGKYVTCHDSDDWSHPEKLQIQAEHLERHTDRI
VANYSYLYFVDDDLRVRARRLGSYLRLNTSSLMFRREPVLSELGFWDEVRFAADSEFLERLYAVFGRISVISIAKPLSLV
RYREDSLTASKAFGYHGFRMGARQFYRERYLRFHRSGLPLRFRGNAQDRPFYVPEPMLPARSPRGARRYFDVVLVLDCRL
GGRELRNAVSVLQSYRRQGMSVAVFHLPIFELDPEKPIQEALIAALDAGLFQYVVTGEQVDCEKLQILGWRPLRDYNRFF
LDVSAKTIEVTTTRSDIFHKAPTAREREICEATLRRYCDAPVTWRDLRQ

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=250, Percent_Identity=26.4, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1790044, Length=94, Percent_Identity=41.4893617021277, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787259, Length=99, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 70427; Mature: 70427

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPMKLRRALINRIPPGMRPLVRRLYEKLPRKGGLAARRIRQHRFRMLNLGYLERGYR
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELAHLAESSRSREIRRRACWELISWHTGQISIEDARKVLSYADMLKRVEWRRGRLIHLAT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
ARSTALCTLGNLAEAARSFEDPSLSQSHPDFILARSGLIDELDGRLAAVNQVLQQEKLSA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHH
VRLLPGSEPAFDRLTTGLRPEADQSGRPLVSVIVPAYNAQYTIATAIRSLQEQTWRNIEI
EEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEE
LVVDDCSTDETVSIVTKLANKDSRIQVLRMERNSGAYCARNLGLKNARGKYVTCHDSDDW
EEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEEEEECCCCC
SHPEKLQIQAEHLERHTDRIVANYSYLYFVDDDLRVRARRLGSYLRLNTSSLMFRREPVL
CCCHHHEEEHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHCHHHEECHHHHHHCCCHHH
SELGFWDEVRFAADSEFLERLYAVFGRISVISIAKPLSLVRYREDSLTASKAFGYHGFRM
HHCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GARQFYRERYLRFHRSGLPLRFRGNAQDRPFYVPEPMLPARSPRGARRYFDVVLVLDCRL
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCHHHHHEEEEEEECCC
GGRELRNAVSVLQSYRRQGMSVAVFHLPIFELDPEKPIQEALIAALDAGLFQYVVTGEQV
CHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
DCEKLQILGWRPLRDYNRFFLDVSAKTIEVTTTRSDIFHKAPTAREREICEATLRRYCDA
CCCHHHEECCCCCCCCCEEEEEECCEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHCCC
PVTWRDLRQ
CCCHHHHCC
>Mature Secondary Structure
MRLLPMKLRRALINRIPPGMRPLVRRLYEKLPRKGGLAARRIRQHRFRMLNLGYLERGYR
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELAHLAESSRSREIRRRACWELISWHTGQISIEDARKVLSYADMLKRVEWRRGRLIHLAT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
ARSTALCTLGNLAEAARSFEDPSLSQSHPDFILARSGLIDELDGRLAAVNQVLQQEKLSA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHH
VRLLPGSEPAFDRLTTGLRPEADQSGRPLVSVIVPAYNAQYTIATAIRSLQEQTWRNIEI
EEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEE
LVVDDCSTDETVSIVTKLANKDSRIQVLRMERNSGAYCARNLGLKNARGKYVTCHDSDDW
EEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEEEEECCCCC
SHPEKLQIQAEHLERHTDRIVANYSYLYFVDDDLRVRARRLGSYLRLNTSSLMFRREPVL
CCCHHHEEEHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHCHHHEECHHHHHHCCCHHH
SELGFWDEVRFAADSEFLERLYAVFGRISVISIAKPLSLVRYREDSLTASKAFGYHGFRM
HHCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GARQFYRERYLRFHRSGLPLRFRGNAQDRPFYVPEPMLPARSPRGARRYFDVVLVLDCRL
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCHHHHHEEEEEEECCC
GGRELRNAVSVLQSYRRQGMSVAVFHLPIFELDPEKPIQEALIAALDAGLFQYVVTGEQV
CHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
DCEKLQILGWRPLRDYNRFFLDVSAKTIEVTTTRSDIFHKAPTAREREICEATLRRYCDA
CCCHHHEECCCCCCCCCEEEEEECCEEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHCCC
PVTWRDLRQ
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]