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The map label for this gene is 110632507

Identifier: 110632507

GI number: 110632507

Start: 180371

End: 181141

Strand: Reverse

Name: 110632507

Synonym: Meso_0145

Alternate gene names: NA

Gene position: 181141-180371 (Counterclockwise)

Preceding gene: 110632508

Following gene: 110632506

Centisome position: 4.11

GC content: 67.19

Gene sequence:

>771_bases
ATGAGCCGCAGGGAAAGCAAGATCACAGAGCACGACCTGCACGCCTACGCCGACGGCGCCCTCGTAGATCCGAAACGCCA
GGAGGTCGAAGCACATCTTGCCGCCGATCCCGCTGCAGCGGAAGAAGTCGAGGCATGGCGCAGGCAGAACGAGGCGTTGC
GCGCCCTCTATGGCCATGTCGCGGCAGAACCCGTTCCTCCGCGCCTGAGCGCCCGCCGGATCGAGCACGCATTCCGCGCC
CGGACCATGCATTGGACCCGCTTGGCGGCTGCCGCCGTCCTTCTCGTGGCCGCAGGCGCCACGGGAGGCTGGCTCGCCCG
CGATCTCTGGGGCCCTGCTCCCGTGCAGGCGACGCTTGTGGCCGAGGCTTTGGAAGCTCACCGCGTCTACGCCGCCGAAG
TCCGCCATCCGGTGGAGGTCTGGGCTGACGAGGCAGACCATCTGCAGGCCTGGCTGTCCAAGCGGCTGGACCGCACGATT
ACCGTGCCGGACCTGCGGCCCGACGGTCTTACGTTGGTCGGAGGGCGGCTGCTTCCCGCTTCGAGCGGACCCGCCGCGCA
GTTCATGTACGAGGATGAGACCGGCCGCAGGCTGACGCTTTACGTCATCCCGACGCAGGACGATCGGGAAACGGCCTTCC
GCTACGCCAAGCTCGAACGGCTCGAGGCATTCTTCTGGAGCGACGATGGGATAAGCTGCGCGCTGGTGGGCGACCTGCCG
CGTGACCGGCTGAAGGAGATCGCGACCCGTGCTTACGAGCAACTTGGATAG

Upstream 100 bases:

>100_bases
TTTCTCTTCCGCTGGGCACCATTATGTCGCGCTTGGGACGGGCGCGTGCAACATTGAGGCGTCTGACGGAGGCGGGCGCG
CCGAAACTGAGGTCCGTGAA

Downstream 100 bases:

>100_bases
ATGCCGGGATGTGGCGCAACAGCCCCCACTCCTACGGCCTCATCGCAATCCTGTTCCACTGGACCATCGCGATCCTCTTT
CTCGGCCAGATCGGGCTCGG

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator; Anti-Sigma Factor; Transmembrane Protein; Transmembrane Regulator PrtR; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Sigma Factor Regulator PrtR; Transmembrane Transcription Regulator; Transmembrane Regulatory Protein

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSRRESKITEHDLHAYADGALVDPKRQEVEAHLAADPAAAEEVEAWRRQNEALRALYGHVAAEPVPPRLSARRIEHAFRA
RTMHWTRLAAAAVLLVAAGATGGWLARDLWGPAPVQATLVAEALEAHRVYAAEVRHPVEVWADEADHLQAWLSKRLDRTI
TVPDLRPDGLTLVGGRLLPASSGPAAQFMYEDETGRRLTLYVIPTQDDRETAFRYAKLERLEAFFWSDDGISCALVGDLP
RDRLKEIATRAYEQLG

Sequences:

>Translated_256_residues
MSRRESKITEHDLHAYADGALVDPKRQEVEAHLAADPAAAEEVEAWRRQNEALRALYGHVAAEPVPPRLSARRIEHAFRA
RTMHWTRLAAAAVLLVAAGATGGWLARDLWGPAPVQATLVAEALEAHRVYAAEVRHPVEVWADEADHLQAWLSKRLDRTI
TVPDLRPDGLTLVGGRLLPASSGPAAQFMYEDETGRRLTLYVIPTQDDRETAFRYAKLERLEAFFWSDDGISCALVGDLP
RDRLKEIATRAYEQLG
>Mature_255_residues
SRRESKITEHDLHAYADGALVDPKRQEVEAHLAADPAAAEEVEAWRRQNEALRALYGHVAAEPVPPRLSARRIEHAFRAR
TMHWTRLAAAAVLLVAAGATGGWLARDLWGPAPVQATLVAEALEAHRVYAAEVRHPVEVWADEADHLQAWLSKRLDRTIT
VPDLRPDGLTLVGGRLLPASSGPAAQFMYEDETGRRLTLYVIPTQDDRETAFRYAKLERLEAFFWSDDGISCALVGDLPR
DRLKEIATRAYEQLG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28539; Mature: 28408

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRESKITEHDLHAYADGALVDPKRQEVEAHLAADPAAAEEVEAWRRQNEALRALYGHV
CCCCHHHCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAEPVPPRLSARRIEHAFRARTMHWTRLAAAAVLLVAAGATGGWLARDLWGPAPVQATLV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHH
AEALEAHRVYAAEVRHPVEVWADEADHLQAWLSKRLDRTITVPDLRPDGLTLVGGRLLPA
HHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCCEEEECCEEECC
SSGPAAQFMYEDETGRRLTLYVIPTQDDRETAFRYAKLERLEAFFWSDDGISCALVGDLP
CCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCC
RDRLKEIATRAYEQLG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRRESKITEHDLHAYADGALVDPKRQEVEAHLAADPAAAEEVEAWRRQNEALRALYGHV
CCCHHHCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAEPVPPRLSARRIEHAFRARTMHWTRLAAAAVLLVAAGATGGWLARDLWGPAPVQATLV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHH
AEALEAHRVYAAEVRHPVEVWADEADHLQAWLSKRLDRTITVPDLRPDGLTLVGGRLLPA
HHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCCEEEECCEEECC
SSGPAAQFMYEDETGRRLTLYVIPTQDDRETAFRYAKLERLEAFFWSDDGISCALVGDLP
CCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCC
RDRLKEIATRAYEQLG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA