Click here to switch to the map view.

The map label for this gene is dcd [C]

Identifier: 110632459

GI number: 110632459

Start: 126885

End: 127970

Strand: Reverse

Name: dcd [C]

Synonym: Meso_0097

Alternate gene names: 110632459

Gene position: 127970-126885 (Counterclockwise)

Preceding gene: 110632484

Following gene: 110632457

Centisome position: 2.9

GC content: 63.72

Gene sequence:

>1086_bases
TTGGCAAGCACAGGTATCCTGCCGGACAAGGAAATCGCGGCGCTCTTTGAAGCCGGCGCTCTGGCCGCGCCGCGCCCGCT
CGACTCGGACCAGATCCAGCCCGCAAGCCTTGACCTGCGCCTGGGCGATGTCGCTTACCGCGTGCGCGCAAGCTTTCTTC
CCGGGCCCGGCTCCCGGGTGGAGGAGAAGCTGGAGCGGCTAAAGCTGCACGAGATTCCCTTGGGCGAAGGCGCGGTTCTC
GAAACCGGCTGCGTCTACATCGTTCCGCTCATGGAAGGGCTCGTCCTTCCCGCCGATGTTTCCGCCTCGGCAAACCCCAA
GAGCTCCACGGGCCGGCTCGACATCTTCACCCGCGTGATGACGGACCACGGCCAGGAATTCGACAAGATCGCTGCCGGCT
ATTCCGGTCCGCTCTATCTGGAAGTGAGCCCACGCACCTTCCCGATCGTCGTCCGCCCCGGCTCGCGCCTGTCGCAGATC
CGCTTCCGCCGCGGCAACGCCCTTCTCACCGAAAGCGATCTTGCCGATCTGCACGAGAGGGAAACGCTCGTGGCAGCGGA
GAGCCCCAACATCTCCGGCGGAGGCATCGCGCTGTCCATCGATCTGGAAGGCGGGCCGGACGGTCTCGTCGGCTACCGCG
CCAAGCATCACACGAGTCTGATCGACGTGGACCGCAAGGCGGCACACGAAATCCACGACTTCTGGGAACCACTCTACAAT
TACGGCTCCAAGGATCTCATCCTCGATCCGGACGAGTTCTATATCCTCGTCTCCCGCGAGGCCGTCCACGTACCCCCCGG
CTATGCCGCGGAGATGACTCCGTTCGACCCGCTGGTTGGCGAATTCCGCGTCCACTATGCCGGCTTCTTCGATCCTGGCT
TCGGCCATTCGGCTTCGGGCGGCACGGGCAGCCGCGCTGTCCTTGAAGTGCGCAGCCACGAAGTGCCCTTCATCCTGGAG
CATGGGCAGATCGTCGGCCGACTGGTCTACGAACGGATGGGCGATTTGCCGCGCGCGCTTTATGGCGCGGATCTCAAATC
CAATTACCAGGGTCAGGCCTTGAAACTCTCTAAGCACTTCCGCTGA

Upstream 100 bases:

>100_bases
CCAAATCACCACGGGGATAAAGTCCCTTTAGACCCGGCTTTCGCTTGCGTCAATCGCGGCGCACAGTAAAGCTCCCATAA
GCTTTCTCAAGGGGAAAAGA

Downstream 100 bases:

>100_bases
CAAATGCCTCAGCTTCGGCGAGGAGCGCGAAGGCAAGACCCGCGCCGCATCCACACAATCCGTTGCGCCACCGCTTGACA
GGTCGAGGATGAAAGGCAAT

Product: 2'-deoxycytidine 5'-triphosphate deaminase

Products: dUTP; NH3

Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MASTGILPDKEIAALFEAGALAAPRPLDSDQIQPASLDLRLGDVAYRVRASFLPGPGSRVEEKLERLKLHEIPLGEGAVL
ETGCVYIVPLMEGLVLPADVSASANPKSSTGRLDIFTRVMTDHGQEFDKIAAGYSGPLYLEVSPRTFPIVVRPGSRLSQI
RFRRGNALLTESDLADLHERETLVAAESPNISGGGIALSIDLEGGPDGLVGYRAKHHTSLIDVDRKAAHEIHDFWEPLYN
YGSKDLILDPDEFYILVSREAVHVPPGYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSASGGTGSRAVLEVRSHEVPFILE
HGQIVGRLVYERMGDLPRALYGADLKSNYQGQALKLSKHFR

Sequences:

>Translated_361_residues
MASTGILPDKEIAALFEAGALAAPRPLDSDQIQPASLDLRLGDVAYRVRASFLPGPGSRVEEKLERLKLHEIPLGEGAVL
ETGCVYIVPLMEGLVLPADVSASANPKSSTGRLDIFTRVMTDHGQEFDKIAAGYSGPLYLEVSPRTFPIVVRPGSRLSQI
RFRRGNALLTESDLADLHERETLVAAESPNISGGGIALSIDLEGGPDGLVGYRAKHHTSLIDVDRKAAHEIHDFWEPLYN
YGSKDLILDPDEFYILVSREAVHVPPGYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSASGGTGSRAVLEVRSHEVPFILE
HGQIVGRLVYERMGDLPRALYGADLKSNYQGQALKLSKHFR
>Mature_360_residues
ASTGILPDKEIAALFEAGALAAPRPLDSDQIQPASLDLRLGDVAYRVRASFLPGPGSRVEEKLERLKLHEIPLGEGAVLE
TGCVYIVPLMEGLVLPADVSASANPKSSTGRLDIFTRVMTDHGQEFDKIAAGYSGPLYLEVSPRTFPIVVRPGSRLSQIR
FRRGNALLTESDLADLHERETLVAAESPNISGGGIALSIDLEGGPDGLVGYRAKHHTSLIDVDRKAAHEIHDFWEPLYNY
GSKDLILDPDEFYILVSREAVHVPPGYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSASGGTGSRAVLEVRSHEVPFILEH
GQIVGRLVYERMGDLPRALYGADLKSNYQGQALKLSKHFR

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.13

Molecular weight: Translated: 39333; Mature: 39202

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTGILPDKEIAALFEAGALAAPRPLDSDQIQPASLDLRLGDVAYRVRASFLPGPGSRV
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEHHCCCCCCCHHH
EEKLERLKLHEIPLGEGAVLETGCVYIVPLMEGLVLPADVSASANPKSSTGRLDIFTRVM
HHHHHHHHHHCCCCCCCCEEECCCEEEEEHHCCEEECCCCCCCCCCCCCCCCCHHHHHHH
TDHGQEFDKIAAGYSGPLYLEVSPRTFPIVVRPGSRLSQIRFRRGNALLTESDLADLHER
HHCCHHHHHHHCCCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHH
ETLVAAESPNISGGGIALSIDLEGGPDGLVGYRAKHHTSLIDVDRKAAHEIHDFWEPLYN
CEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCEEEECCHHHHHHHHHHHHHHHH
YGSKDLILDPDEFYILVSREAVHVPPGYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSASG
CCCCCEEECCCCEEEEEECCEEECCCCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCCCC
GTGSRAVLEVRSHEVPFILEHGQIVGRLVYERMGDLPRALYGADLKSNYQGQALKLSKHF
CCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCCCC
R
C
>Mature Secondary Structure 
ASTGILPDKEIAALFEAGALAAPRPLDSDQIQPASLDLRLGDVAYRVRASFLPGPGSRV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEHHCCCCCCCHHH
EEKLERLKLHEIPLGEGAVLETGCVYIVPLMEGLVLPADVSASANPKSSTGRLDIFTRVM
HHHHHHHHHHCCCCCCCCEEECCCEEEEEHHCCEEECCCCCCCCCCCCCCCCCHHHHHHH
TDHGQEFDKIAAGYSGPLYLEVSPRTFPIVVRPGSRLSQIRFRRGNALLTESDLADLHER
HHCCHHHHHHHCCCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCEEEEHHHHHHHHHH
ETLVAAESPNISGGGIALSIDLEGGPDGLVGYRAKHHTSLIDVDRKAAHEIHDFWEPLYN
CEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCEEEECCHHHHHHHHHHHHHHHH
YGSKDLILDPDEFYILVSREAVHVPPGYAAEMTPFDPLVGEFRVHYAGFFDPGFGHSASG
CCCCCEEECCCCEEEEEECCEEECCCCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCCCC
GTGSRAVLEVRSHEVPFILEHGQIVGRLVYERMGDLPRALYGADLKSNYQGQALKLSKHF
CCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEECCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCTP; H2O

Specific reaction: dCTP + H2O = dUTP + NH3

General reaction: Amidine hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA