| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632484
Identifier: 110632484
GI number: 110632484
Start: 149071
End: 150606
Strand: Reverse
Name: 110632484
Synonym: Meso_0122
Alternate gene names: NA
Gene position: 150606-149071 (Counterclockwise)
Preceding gene: 110632485
Following gene: 110632459
Centisome position: 3.41
GC content: 58.92
Gene sequence:
>1536_bases ATGTTCCCATCGGTTAATAGCGCATCGCTGAGTGTAACTTATCTTCCCGACGGCACCACGACTTTTCACATAGGCGATAC TCCTCCCACTCCACACCGCGCACCGCCGCCCACCTTCAACAACAGGACCATGGATAGCGAGAATGGAGGCAGGCAAAACC CTGTGCAGCGCCCGCAGGGCAGCTCGATCGCACTTTCAACGGGGGAAACAGCTCTTCCCCGCCGTGCCACCGCAGTGTCC GTAGAGTATCGGCAGGATTCGGTCTTCATCCACATCGAAGGGGATACATCGACGGTCGCGCCCAGGGCGGCATCCTCGAC GGAGATCGACATGCCGCGCGCGGATATCGCCCTCGATATTCCGGAGCGGGAGACGATCGCGTCTCATTTGAGATCACTCA TACGAGCGGATTTGCCCGAGGACATCCATGAAGGGCTTTCCACCCATTTCGACAGTGTCGGCGATCGCCTGGCCGAAAAG GGCGAGAAGCTCGAAGACATCATCGCACTTTCAAAAAAAGCATTGCGGCGGGACCTTATCGCGGCGGCCGCCGGTGGTGC GATCAAAAATATCCCCAGCATGGCGGCAGGGCTGAGCGCGGACTTTGTACCCCGCTTCTTTGCCTCTGCGGGGAGGTTCA ATAATCCGGTCGACGAAGCGGCGACAGTCGGGGCGCAGACTGCCGCATTCGAGCACGCAGCTGATACGATAGGGTGTTAT GCGCTGTCCTTGCGCCTGGTCCCCTCCGATGCCGGCGACCGCTATTACCTGGCACCGAAAGTGGAGAAGCTGACCGGCCC CGCAGCGCAGGCGCAGGAGAAGCTGCAGCCCACTATGTGCCGGCAGGCGCTAAACCAGTTTGTGACGTCCCAGATTTCAC TCGTGAGAGCCTTGGTTGTGCTTCCGGTAGCAACCGCGGTTGATGCCGCAGGTTCGCGTGCAGCTACGGCTATCGCGGAG AATACGCTCAACAATGTGCTTCGCTTGCCGGCTGGGGCAGTAAAGGACGCGTGCCGCTATGGCATCGAATACTGGGCTGG CCGCTATGGCCCGTTGTGGCTATTTGGCCGGCAGGATTGGGAGCAGGTATACGATGATTTGAAGGCATCTCCCACTCGTG AACCAGTCGCGAACGCACTTTGCAGCGTGTTGGTGCTTCCGTATGACGCCGTCCGTCATTTGGGGAGCAATGTCAAAAAC TTCCTTTCGCCATCGAAATTGTTAGCCGGTGCGACCTTGGTCGGGGGATTCAGCATGTATGCGGCGGCCAGAGCGGGCGT GAAGGAAGGGGTGGAACGGCTGGGAGCCAATCGTGTGGCGGGAGATGGCATTGCGAAAGCCGTATCTCTTCCACTGAGGG GTATCGTCGTTGGAGCAGCGGAAATCATTGAAGGCCCTGCGCAAAAAGGATTCGAGAAGCTATCGGACGCGATCGACAGG CGACTGGCGTCTCTCTTGCAAACTAACAAGCCAAGCGGGACAGAGGACCGCACCGCTGCAGAAGACCGCAGTGGCAATGC ATCGCAAATTGCTTAG
Upstream 100 bases:
>100_bases GCATGCTGTCAAAAGCGCAGCTCTCCAGGAGCTCCAGCGCAATAGAGCATGAGACGAGATCTGTTCGTCGCCTGACACCA CTTATTTCAAGGAATTGACT
Downstream 100 bases:
>100_bases GCGGGCAACAGTTTGCTAGCGAGCACCGCCAGTCCCTTGCTCTGGATATCGCGCGTCCACCGATCCATCGTTGGGCGCGT GATCGCATGTAGGCGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MFPSVNSASLSVTYLPDGTTTFHIGDTPPTPHRAPPPTFNNRTMDSENGGRQNPVQRPQGSSIALSTGETALPRRATAVS VEYRQDSVFIHIEGDTSTVAPRAASSTEIDMPRADIALDIPERETIASHLRSLIRADLPEDIHEGLSTHFDSVGDRLAEK GEKLEDIIALSKKALRRDLIAAAAGGAIKNIPSMAAGLSADFVPRFFASAGRFNNPVDEAATVGAQTAAFEHAADTIGCY ALSLRLVPSDAGDRYYLAPKVEKLTGPAAQAQEKLQPTMCRQALNQFVTSQISLVRALVVLPVATAVDAAGSRAATAIAE NTLNNVLRLPAGAVKDACRYGIEYWAGRYGPLWLFGRQDWEQVYDDLKASPTREPVANALCSVLVLPYDAVRHLGSNVKN FLSPSKLLAGATLVGGFSMYAAARAGVKEGVERLGANRVAGDGIAKAVSLPLRGIVVGAAEIIEGPAQKGFEKLSDAIDR RLASLLQTNKPSGTEDRTAAEDRSGNASQIA
Sequences:
>Translated_511_residues MFPSVNSASLSVTYLPDGTTTFHIGDTPPTPHRAPPPTFNNRTMDSENGGRQNPVQRPQGSSIALSTGETALPRRATAVS VEYRQDSVFIHIEGDTSTVAPRAASSTEIDMPRADIALDIPERETIASHLRSLIRADLPEDIHEGLSTHFDSVGDRLAEK GEKLEDIIALSKKALRRDLIAAAAGGAIKNIPSMAAGLSADFVPRFFASAGRFNNPVDEAATVGAQTAAFEHAADTIGCY ALSLRLVPSDAGDRYYLAPKVEKLTGPAAQAQEKLQPTMCRQALNQFVTSQISLVRALVVLPVATAVDAAGSRAATAIAE NTLNNVLRLPAGAVKDACRYGIEYWAGRYGPLWLFGRQDWEQVYDDLKASPTREPVANALCSVLVLPYDAVRHLGSNVKN FLSPSKLLAGATLVGGFSMYAAARAGVKEGVERLGANRVAGDGIAKAVSLPLRGIVVGAAEIIEGPAQKGFEKLSDAIDR RLASLLQTNKPSGTEDRTAAEDRSGNASQIA >Mature_511_residues MFPSVNSASLSVTYLPDGTTTFHIGDTPPTPHRAPPPTFNNRTMDSENGGRQNPVQRPQGSSIALSTGETALPRRATAVS VEYRQDSVFIHIEGDTSTVAPRAASSTEIDMPRADIALDIPERETIASHLRSLIRADLPEDIHEGLSTHFDSVGDRLAEK GEKLEDIIALSKKALRRDLIAAAAGGAIKNIPSMAAGLSADFVPRFFASAGRFNNPVDEAATVGAQTAAFEHAADTIGCY ALSLRLVPSDAGDRYYLAPKVEKLTGPAAQAQEKLQPTMCRQALNQFVTSQISLVRALVVLPVATAVDAAGSRAATAIAE NTLNNVLRLPAGAVKDACRYGIEYWAGRYGPLWLFGRQDWEQVYDDLKASPTREPVANALCSVLVLPYDAVRHLGSNVKN FLSPSKLLAGATLVGGFSMYAAARAGVKEGVERLGANRVAGDGIAKAVSLPLRGIVVGAAEIIEGPAQKGFEKLSDAIDR RLASLLQTNKPSGTEDRTAAEDRSGNASQIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54203; Mature: 54203
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPSVNSASLSVTYLPDGTTTFHIGDTPPTPHRAPPPTFNNRTMDSENGGRQNPVQRPQG CCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSIALSTGETALPRRATAVSVEYRQDSVFIHIEGDTSTVAPRAASSTEIDMPRADIALDI CEEEEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEC PERETIASHLRSLIRADLPEDIHEGLSTHFDSVGDRLAEKGEKLEDIIALSKKALRRDLI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAAGGAIKNIPSMAAGLSADFVPRFFASAGRFNNPVDEAATVGAQTAAFEHAADTIGCY HHHCCCHHHHCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHEE ALSLRLVPSDAGDRYYLAPKVEKLTGPAAQAQEKLQPTMCRQALNQFVTSQISLVRALVV EEEEEEEECCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVATAVDAAGSRAATAIAENTLNNVLRLPAGAVKDACRYGIEYWAGRYGPLWLFGRQDW HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHH EQVYDDLKASPTREPVANALCSVLVLPYDAVRHLGSNVKNFLSPSKLLAGATLVGGFSMY HHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AAARAGVKEGVERLGANRVAGDGIAKAVSLPLRGIVVGAAEIIEGPAQKGFEKLSDAIDR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RLASLLQTNKPSGTEDRTAAEDRSGNASQIA HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MFPSVNSASLSVTYLPDGTTTFHIGDTPPTPHRAPPPTFNNRTMDSENGGRQNPVQRPQG CCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSIALSTGETALPRRATAVSVEYRQDSVFIHIEGDTSTVAPRAASSTEIDMPRADIALDI CEEEEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEC PERETIASHLRSLIRADLPEDIHEGLSTHFDSVGDRLAEKGEKLEDIIALSKKALRRDLI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAAGGAIKNIPSMAAGLSADFVPRFFASAGRFNNPVDEAATVGAQTAAFEHAADTIGCY HHHCCCHHHHCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHEE ALSLRLVPSDAGDRYYLAPKVEKLTGPAAQAQEKLQPTMCRQALNQFVTSQISLVRALVV EEEEEEEECCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVATAVDAAGSRAATAIAENTLNNVLRLPAGAVKDACRYGIEYWAGRYGPLWLFGRQDW HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHH EQVYDDLKASPTREPVANALCSVLVLPYDAVRHLGSNVKNFLSPSKLLAGATLVGGFSMY HHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AAARAGVKEGVERLGANRVAGDGIAKAVSLPLRGIVVGAAEIIEGPAQKGFEKLSDAIDR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RLASLLQTNKPSGTEDRTAAEDRSGNASQIA HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA