Click here to switch to the map view.

The map label for this gene is ynjF [H]

Identifier: 110632435

GI number: 110632435

Start: 99193

End: 99753

Strand: Direct

Name: ynjF [H]

Synonym: Meso_0073

Alternate gene names: 110632435

Gene position: 99193-99753 (Clockwise)

Preceding gene: 110632433

Following gene: 110632436

Centisome position: 2.25

GC content: 57.58

Gene sequence:

>561_bases
ATGCTTGCGGAGCGGTTGGTCAAGGCTGGCATCTCGTCTGATACGGTCACTATCGCTGGTTTCCTCCTCGGACTTATGGC
AGGTGCCGCCATCATTGCAGGCTGGTTCCTAGCGGCAATTATCTTGATCCTCTTGAGCCGCCTTGCGGACGGCCTGGACG
GGGCCGTGGCGCGCCTCACCAACAGTTCCGATTTTGGCGGCTATCTTGATATCGTGCTCGACTTCGCCTTCTACGGAGTA
ATCCCGCTCGCTTTCGTGCTTCACAATCCGGTCGACAATGGCCTTGCCGGCGCCGTGCTGCTTTTTTCGTTCTACGTGAA
TGGCGCGAGTTTTCTGGCCTATGCCGTGATCGCGGAAAAGCGCCGTCTGGCGACGACGATTCGTGGAGAAAAGAGCTTCT
TCTTCACGACGGGGCTGGCGGAAGCAGGCGAAACCTTGATCATATTCCTGCTCTTCTGCCTTTTCCCTGACTGGTTTGCG
ACGCTCGCCTATCTGTTTGCCGCGCTCACGCTCTACACCGCTATCTCGCGGATTGTTCTGGCGGCAGGAGTCTTCCGCTG
A

Upstream 100 bases:

>100_bases
TATGTAACGCGCGGGGCTATAGATCAATGCAGATACGGGATCTGGGAGCGCGGCCTTGATTGACGGCTGGGGACGAAGAA
AACTGGAGCTTCCGATATCG

Downstream 100 bases:

>100_bases
AGCTGCGGCATTGTAATGACTATCCCCTGAAATTCTGAGCTTTTCGCGGACCTGGAAATCCACCAAAATCCGCAGCGATG
GCGCCGCTGAAGGCCGCCCG

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLAERLVKAGISSDTVTIAGFLLGLMAGAAIIAGWFLAAIILILLSRLADGLDGAVARLTNSSDFGGYLDIVLDFAFYGV
IPLAFVLHNPVDNGLAGAVLLFSFYVNGASFLAYAVIAEKRRLATTIRGEKSFFFTTGLAEAGETLIIFLLFCLFPDWFA
TLAYLFAALTLYTAISRIVLAAGVFR

Sequences:

>Translated_186_residues
MLAERLVKAGISSDTVTIAGFLLGLMAGAAIIAGWFLAAIILILLSRLADGLDGAVARLTNSSDFGGYLDIVLDFAFYGV
IPLAFVLHNPVDNGLAGAVLLFSFYVNGASFLAYAVIAEKRRLATTIRGEKSFFFTTGLAEAGETLIIFLLFCLFPDWFA
TLAYLFAALTLYTAISRIVLAAGVFR
>Mature_186_residues
MLAERLVKAGISSDTVTIAGFLLGLMAGAAIIAGWFLAAIILILLSRLADGLDGAVARLTNSSDFGGYLDIVLDFAFYGV
IPLAFVLHNPVDNGLAGAVLLFSFYVNGASFLAYAVIAEKRRLATTIRGEKSFFFTTGLAEAGETLIIFLLFCLFPDWFA
TLAYLFAALTLYTAISRIVLAAGVFR

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=173, Percent_Identity=47.3988439306358, Blast_Score=146, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 19863; Mature: 19863

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAERLVKAGISSDTVTIAGFLLGLMAGAAIIAGWFLAAIILILLSRLADGLDGAVARLT
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
NSSDFGGYLDIVLDFAFYGVIPLAFVLHNPVDNGLAGAVLLFSFYVNGASFLAYAVIAEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLATTIRGEKSFFFTTGLAEAGETLIIFLLFCLFPDWFATLAYLFAALTLYTAISRIVL
HHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVFR
HHHCCC
>Mature Secondary Structure
MLAERLVKAGISSDTVTIAGFLLGLMAGAAIIAGWFLAAIILILLSRLADGLDGAVARLT
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
NSSDFGGYLDIVLDFAFYGVIPLAFVLHNPVDNGLAGAVLLFSFYVNGASFLAYAVIAEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLATTIRGEKSFFFTTGLAEAGETLIIFLLFCLFPDWFATLAYLFAALTLYTAISRIVL
HHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVFR
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]