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The map label for this gene is ymfK [C]

Identifier: 110632380

GI number: 110632380

Start: 18960

End: 19604

Strand: Reverse

Name: ymfK [C]

Synonym: Meso_0018

Alternate gene names: 110632380

Gene position: 19604-18960 (Counterclockwise)

Preceding gene: 110632381

Following gene: 110632378

Centisome position: 0.44

GC content: 62.02

Gene sequence:

>645_bases
GTGCTTTCTCACGAGAAGGTCTGGGCGGCTATTGACGCGCTTGCTGCGCGGCACTCCCTATCCGCCTCAGGTCTGGCCAG
GAAGGCAGGTCTGGACTCCACCGCCTTTAATCGCTCCAAGCGCCATTCTCCGGATGGCAGGCCACGCTGGCCATCAACGG
AATCACTTGCCAAAATCATGGATGCGACCGGTGTCACGCTCGGCGAATTCACGGCGCTGATCGAGGAAATGGCGGAGTCG
GGACGGCGCAAGCCGGGCCGTATCAGCGTGCCGCTGATCGGTTTTGCGCAGGCAGGTGCCGGCGGCTACTTCACCGATGC
AGGCTTTCCCGTCGGACAAGGCTGGGAGCAGGTGGAGCTTCCTGGCCAGGTCAGCGAGGCCGCGTATGCTCTGGAGGTGC
AGGGCGATTCCATGCTGCCGCTCTACCGCAATGGAGACGTGCTGGTGGTGGAGCCGTCAGCCCCGGTTCGGCGTGGCGAT
CGTGTCGTGGTCAGGACGTTGGATGGAGAGGTCATGGCAAAGATCCTGCTGCGACAGACCTCCCGCCAGATGGAGCTCCT
GTCTCTTAATCCAGACCATCCGAACCGAGTGCTCGGGCATGAAGAAGTGGACTGGATTGCCCGAATTGTCTGGGCTAGCC
AATAG

Upstream 100 bases:

>100_bases
TAGCCAAGCGTTTGTGGACAAGCACATACGTAAGAGTTAAAAAAGCTGTTCTACGGGTAATTTCCGCTCGTGGAGCAGCA
GTCTGCGGAGGAAGAGGGGC

Downstream 100 bases:

>100_bases
CCCTCCCCGTCTCCTCGCGGAGACGGAGAAGAATGATTATCCTGCCAGCTCTCCGGCCAACGCCTTTTCGATCAGCGCCC
GCGTCTCCGTGACGCCGTAA

Product: putative phage repressor

Products: NA

Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; S24 Family Peptidase; Transcriptional Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Peptidase Family; Bacteriophage-Related Transcriptional Repressor; Cro/CI Family Transcriptional Regulator; Transcription Regulator Protein; Repressor CI Bacteriophage Origin; Phage-Related Transcriptional Regulator; Peptidase S

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLSHEKVWAAIDALAARHSLSASGLARKAGLDSTAFNRSKRHSPDGRPRWPSTESLAKIMDATGVTLGEFTALIEEMAES
GRRKPGRISVPLIGFAQAGAGGYFTDAGFPVGQGWEQVELPGQVSEAAYALEVQGDSMLPLYRNGDVLVVEPSAPVRRGD
RVVVRTLDGEVMAKILLRQTSRQMELLSLNPDHPNRVLGHEEVDWIARIVWASQ

Sequences:

>Translated_214_residues
MLSHEKVWAAIDALAARHSLSASGLARKAGLDSTAFNRSKRHSPDGRPRWPSTESLAKIMDATGVTLGEFTALIEEMAES
GRRKPGRISVPLIGFAQAGAGGYFTDAGFPVGQGWEQVELPGQVSEAAYALEVQGDSMLPLYRNGDVLVVEPSAPVRRGD
RVVVRTLDGEVMAKILLRQTSRQMELLSLNPDHPNRVLGHEEVDWIARIVWASQ
>Mature_214_residues
MLSHEKVWAAIDALAARHSLSASGLARKAGLDSTAFNRSKRHSPDGRPRWPSTESLAKIMDATGVTLGEFTALIEEMAES
GRRKPGRISVPLIGFAQAGAGGYFTDAGFPVGQGWEQVELPGQVSEAAYALEVQGDSMLPLYRNGDVLVVEPSAPVRRGD
RVVVRTLDGEVMAKILLRQTSRQMELLSLNPDHPNRVLGHEEVDWIARIVWASQ

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23280; Mature: 23280

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHEKVWAAIDALAARHSLSASGLARKAGLDSTAFNRSKRHSPDGRPRWPSTESLAKIM
CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH
DATGVTLGEFTALIEEMAESGRRKPGRISVPLIGFAQAGAGGYFTDAGFPVGQGWEQVEL
HHCCCCHHHHHHHHHHHHHHCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCEEEC
PGQVSEAAYALEVQGDSMLPLYRNGDVLVVEPSAPVRRGDRVVVRTLDGEVMAKILLRQT
CCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHH
SRQMELLSLNPDHPNRVLGHEEVDWIARIVWASQ
HCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSHEKVWAAIDALAARHSLSASGLARKAGLDSTAFNRSKRHSPDGRPRWPSTESLAKIM
CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH
DATGVTLGEFTALIEEMAESGRRKPGRISVPLIGFAQAGAGGYFTDAGFPVGQGWEQVEL
HHCCCCHHHHHHHHHHHHHHCCCCCCEEECEEEEEECCCCCCCCCCCCCCCCCCCCEEEC
PGQVSEAAYALEVQGDSMLPLYRNGDVLVVEPSAPVRRGDRVVVRTLDGEVMAKILLRQT
CCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHH
SRQMELLSLNPDHPNRVLGHEEVDWIARIVWASQ
HCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA