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The map label for this gene is nahD [H]

Identifier: 110632381

GI number: 110632381

Start: 19702

End: 20331

Strand: Reverse

Name: nahD [H]

Synonym: Meso_0019

Alternate gene names: 110632381

Gene position: 20331-19702 (Counterclockwise)

Preceding gene: 110632382

Following gene: 110632380

Centisome position: 0.46

GC content: 60.63

Gene sequence:

>630_bases
ATGGAAGGGTCCATGCCTGCCACCGTCGACTACTATATGACGTCCGTTTCCCCTTTTACCTATCTCGGGCACCAGACCTT
CCGCGCAATCGCCCACAAGCATGGCGTTGCTGTGCGCGTGAAGCCGGTGAATCTCGGGCCGATCTTCGAGAACTCGGGCG
CGCTTCCCCTTGCGCAGAGGCCGGCCATTCGGCAGCGCTATCGCAGGATTGAGCTGCAGCGGGTGGCGGAGTATCGCGGG
CTGCCGATCCACACCAAGCCAAAGTTCTGGCCGGTCGATCCCAGCCTGGCAGATCACACAATCATCGCGCTGGTAGAAGC
CGGCGAGAACCCACTGAGCTATATGGAACGCGTGTTCGCGGCGGTGTGGGCCAACGAAGAGGATATTGCGGAAGCAGCTA
CGCTGGCCACCTATCTGAAAGCGGAGGGTTTCGACGCGGATGCAATTCTGGAGGCGGCGGCGAGCCCACAAACATTCGAT
ATTCGCGCGCGAAACACGCAAGATGCGATTGCTGCCGATGCTGTGGGCGTGCCCACCTGGATCCTGAACGGAGAGCCGTT
TTGGGGTCAGGATCGGCTCGAACATCTTGACCAGGCGCTTGCCGCCGGGCGAAAAGCCTTTTCAGCATAG

Upstream 100 bases:

>100_bases
ATTCATGGCTTCTCACCAAGGGCTGCGCGCGCTGGCGAAAATTCTCACTTGAGGGACTTCCCCGTCCCGCCGTCTCCCTC
TACCCTTTTGTTTTTAACGT

Downstream 100 bases:

>100_bases
CCAAGCGTTTGTGGACAAGCACATACGTAAGAGTTAAAAAAGCTGTTCTACGGGTAATTTCCGCTCGTGGAGCAGCAGTC
TGCGGAGGAAGAGGGGCGTG

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEGSMPATVDYYMTSVSPFTYLGHQTFRAIAHKHGVAVRVKPVNLGPIFENSGALPLAQRPAIRQRYRRIELQRVAEYRG
LPIHTKPKFWPVDPSLADHTIIALVEAGENPLSYMERVFAAVWANEEDIAEAATLATYLKAEGFDADAILEAAASPQTFD
IRARNTQDAIAADAVGVPTWILNGEPFWGQDRLEHLDQALAAGRKAFSA

Sequences:

>Translated_209_residues
MEGSMPATVDYYMTSVSPFTYLGHQTFRAIAHKHGVAVRVKPVNLGPIFENSGALPLAQRPAIRQRYRRIELQRVAEYRG
LPIHTKPKFWPVDPSLADHTIIALVEAGENPLSYMERVFAAVWANEEDIAEAATLATYLKAEGFDADAILEAAASPQTFD
IRARNTQDAIAADAVGVPTWILNGEPFWGQDRLEHLDQALAAGRKAFSA
>Mature_209_residues
MEGSMPATVDYYMTSVSPFTYLGHQTFRAIAHKHGVAVRVKPVNLGPIFENSGALPLAQRPAIRQRYRRIELQRVAEYRG
LPIHTKPKFWPVDPSLADHTIIALVEAGENPLSYMERVFAAVWANEEDIAEAATLATYLKAEGFDADAILEAAASPQTFD
IRARNTQDAIAADAVGVPTWILNGEPFWGQDRLEHLDQALAAGRKAFSA

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 23043; Mature: 23043

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGSMPATVDYYMTSVSPFTYLGHQTFRAIAHKHGVAVRVKPVNLGPIFENSGALPLAQR
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCC
PAIRQRYRRIELQRVAEYRGLPIHTKPKFWPVDPSLADHTIIALVEAGENPLSYMERVFA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHH
AVWANEEDIAEAATLATYLKAEGFDADAILEAAASPQTFDIRARNTQDAIAADAVGVPTW
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCEE
ILNGEPFWGQDRLEHLDQALAAGRKAFSA
EECCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEGSMPATVDYYMTSVSPFTYLGHQTFRAIAHKHGVAVRVKPVNLGPIFENSGALPLAQR
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCC
PAIRQRYRRIELQRVAEYRGLPIHTKPKFWPVDPSLADHTIIALVEAGENPLSYMERVFA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHH
AVWANEEDIAEAATLATYLKAEGFDADAILEAAASPQTFDIRARNTQDAIAADAVGVPTW
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCEE
ILNGEPFWGQDRLEHLDQALAAGRKAFSA
EECCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]