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The map label for this gene is nspC

Identifier: 109948161

GI number: 109948161

Start: 1467927

End: 1469144

Strand: Reverse

Name: nspC

Synonym: Hac_1688

Alternate gene names: NA

Gene position: 1469144-1467927 (Counterclockwise)

Preceding gene: 109948162

Following gene: 109948154

Centisome position: 94.54

GC content: 40.64

Gene sequence:

>1218_bases
ATGAAACAATACAGTGCTATCCCCACCCCTTGCTATGTGCTAGAGAGCGAACGCTTAGAAAAAAACGCCAACATCTTAGA
GATTGTGCACCAACAAAGTGGGGCAAAAATTTTGCTCGCTTTAAAAGGGTATGCGTTTTGGCGCGAGTTTGGAATTTTAA
GGAAAAAATTGAATGGGTGTTGTGCGAGCGGTCTTTATGAAGCCAAGCTCGCTTTTGAAGAATTTGGGGGGCGAGAGAGT
CAGAAAGAAATTTGCGTTTATAGCCCAGCCTTTAAGGAGGCTGAAATCAATGCCATTTTACCCCTAGCCACAAGCATTAT
TTTTAACTCTTTTTATCAATATACCACCTACAAAGACAGGATTTTAGAGAAAAACAAACAATTAGAAAACTTAGGCTTAA
GCCCCATTAAAATGGGTTTAAGGATCAACCCCCTTTATAGTGAAGTAACCCCAGCGATTTATAACCCATGCTCTAAAGCA
AGCCGGTTAGGGATTGTGCCTAGCGAATTTGAAAAAGGGGTCAAAGAGCATGGTTTAGAAGGGGTGAATGGGTTGCATTT
CCATACGCATTGTGAGCAAAATGCTGATGCTTTGTGTAGGACTTTAGAGCATGTAGAAAGGCATTTCAAGCCTTATTTAG
AGGGCATGGAGTGGGTGAATTTTGGTGGAGGGCATCATATCACTAGAAGCGATTATGATGTGGATTTGCTCATTCAAACG
ATCAAAGATTTTAAAGAACGCTACTGCAACATAGAAGTGATTTTAGAGCCTGGGGAAGCCATAGGGTGGCAATGCGGGTT
TTTGCTCGCAAGCGTGATAGACATCATTAAAAACGACCAAGAAATTGCGATTTTAGACACTTCTTTTAGCGCTCACATGC
CCGATTGCTTAGAGATGCCTTATCGCCCTAGCATTCTTAAAATCTCCATAGAAAACGATGGAGAGCTTATTGAAGTTGAA
AAGGGCGAAAATCAAGGGGCGTTTTCTTACTTTTTGGGCGGTCCTACTTGTTTGGCGGGGGATTTTATGGGGAGCTTTAG
TTTTGATACGCCTTTAAAAAGGGGCGATAAAATCTTATTTAAAGACATGCTCCATTATACGATCGTTAAAAACAATTCGT
TTAACGGCATTCCGCTCCCAAGCCTAGCTAAAATAGACGAACAAGGTTTCAAAATCCTTAAAAACTTTTCTTATGAAGAT
TATAAAAACAGGAATTAG

Upstream 100 bases:

>100_bases
CTAATGAAGACATGGCTAGGAGTTTAAAGGCGGATGATTTCATCTCTAAATCTAACCCCAAAGACATACAGCGAGTGGTT
AAGCAATTTTTGGAATTAGC

Downstream 100 bases:

>100_bases
GGCTTTTTAGGATTTTTTCCAACTTGTGAAAAGACTCACGCACAGCACCCCAATACCAAGCCCAGCAAACACTGCGCCAA
TGGTGTGCATGTCTAAATAA

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKQYSAIPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLYEAKLAFEEFGGRES
QKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDRILEKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKA
SRLGIVPSEFEKGVKEHGLEGVNGLHFHTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQT
IKDFKERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMPYRPSILKISIENDGELIEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLHYTIVKNNSFNGIPLPSLAKIDEQGFKILKNFSYED
YKNRN

Sequences:

>Translated_405_residues
MKQYSAIPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLYEAKLAFEEFGGRES
QKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDRILEKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKA
SRLGIVPSEFEKGVKEHGLEGVNGLHFHTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQT
IKDFKERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMPYRPSILKISIENDGELIEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLHYTIVKNNSFNGIPLPSLAKIDEQGFKILKNFSYED
YKNRN
>Mature_405_residues
MKQYSAIPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLYEAKLAFEEFGGRES
QKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDRILEKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKA
SRLGIVPSEFEKGVKEHGLEGVNGLHFHTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQT
IKDFKERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMPYRPSILKISIENDGELIEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLHYTIVKNNSFNGIPLPSLAKIDEQGFKILKNFSYED
YKNRN

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45905; Mature: 45905

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYSAIPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGC
CCCCCCCCCCEEEECHHHHHCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
CASGLYEAKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDR
HHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ILEKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKASRLGIVPSEFEKGVKEHGLE
HHHHHHHHHHCCCCCEEECCEECCHHHHCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCCC
GVNGLHFHTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQT
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHH
IKDFKERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMP
HHHHHHHHCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCC
YRPSILKISIENDGELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILF
CCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEHHHHCCCCCCCCCHHCCCHHHH
KDMLHYTIVKNNSFNGIPLPSLAKIDEQGFKILKNFSYEDYKNRN
HHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKQYSAIPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGC
CCCCCCCCCCEEEECHHHHHCCCCHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
CASGLYEAKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDR
HHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ILEKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKASRLGIVPSEFEKGVKEHGLE
HHHHHHHHHHCCCCCEEECCEECCHHHHCCHHHHCCHHHHHHCCCCHHHHHHHHHHCCCC
GVNGLHFHTHCEQNADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQT
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHH
IKDFKERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMP
HHHHHHHHCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCC
YRPSILKISIENDGELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILF
CCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEHHHHCCCCCCCCCHHCCCHHHH
KDMLHYTIVKNNSFNGIPLPSLAKIDEQGFKILKNFSYEDYKNRN
HHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA