Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947947

Identifier: 109947947

GI number: 109947947

Start: 1257548

End: 1258468

Strand: Reverse

Name: 109947947

Synonym: Hac_1450

Alternate gene names: NA

Gene position: 1258468-1257548 (Counterclockwise)

Preceding gene: 109947948

Following gene: 109947924

Centisome position: 80.99

GC content: 39.96

Gene sequence:

>921_bases
TTGAAACGGATTTTATTTCTTTTAACGGCGACAGTTTTTTTGCTTAATGCAGATACGACTATCAGCACTACGGTTGATCC
GAATGTTATGTTTTATGACAAATCCACAGGGAATGTGAAAAAGGATCGCAAAAGAGTCTTAAAAAACATGGTTAATTTGG
AAAAAGAGCGCGTGAAGAGTTTTAACGAGTATTCCGAAACCAAGATGAGTAAGGGCGATTTAGCCGCTTTTGGAGCTTTC
TTTAAAGCGAGTTTGGAAAGCTGTGTGGAGCAAAAGGTTTGTTATTATGAGCATAAAGATGGCAAAGTTTCTTTTGTGGT
GAATGACAGAGAAAAGTTTTATAAACATGTGCTTAAAGATTTAGGGACAGAGCTTTCACTCCCTTTGTTCAACTGGCTTT
ATAAGGGCTCAGATTTTGGGGCTTTGCATGAGCAGTTTGGGGATATGTATGATGGGTATATCAAATATCTGATCAGCATG
GTTAGGGTGAGCCAAAAAGAAAAGGCTAAAAAAGTGGATGCAACCGCTCTTAAAGAAATGGAAGAATTAGCTAAGAAAAA
CACTGAAGAGGCATTCCAAAAAAGAAGCGATGGGGAGATCCAATCTCATAGCGACAGCCCTGATTTCATAGGGAATTCCC
AAAAAGTCAAGAACGACGCCACTCCAACTCCAGTCCCTTTGATCGGTAATGTTGGCAATAACGCTAATGCTAACACTAAT
ACCAACGCATCCAAAGAAACAGCTTCAAAAGAGGAAGTGTCTCCATCACAAGAGGCGTCTCCGTCAAAAAAGAAAAAGAA
AGCCAAGAAAAAGCGCCGTCTCTCTAAAAAAGAGAAGCGACAAGCCTTGCAACAAGAGCTTGAAAAGCACGGCAACTCTA
ACGAGTCTCATAAAACCGAAGAACATAACGAGAAAAAATAG

Upstream 100 bases:

>100_bases
ACTGAAATAACTTGCATTCTAGATGGGTTTTATAAACAAAAGAGGACTTAATGAGAAGCAGTATCTATTTTTGTTGCGAT
GATGTATATAGGAGTTTGGT

Downstream 100 bases:

>100_bases
CCGTCTTGCCCTTTTGAAAAAGAGAGCTCTTATAACTTTTTTTAAAGCCACTGCCCCCTAAAACCGCCGTTTTTTAAAAT
CTTTAGGCTTTGAGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKSFNEYSETKMSKGDLAAFGAF
FKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISM
VRVSQKEKAKKVDATALKEMEELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN
TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTEEHNEKK

Sequences:

>Translated_306_residues
MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKSFNEYSETKMSKGDLAAFGAF
FKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISM
VRVSQKEKAKKVDATALKEMEELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN
TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTEEHNEKK
>Mature_306_residues
MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKSFNEYSETKMSKGDLAAFGAF
FKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISM
VRVSQKEKAKKVDATALKEMEELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN
TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTEEHNEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34768; Mature: 34768

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKS
CHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
FNEYSETKMSKGDLAAFGAFFKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHH
LGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKAKKVDATALKEM
HCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN
HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCC
TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTE
CCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EHNEKK
HHCCCC
>Mature Secondary Structure
MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKS
CHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
FNEYSETKMSKGDLAAFGAFFKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKD
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHH
LGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKAKKVDATALKEM
HCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN
HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCC
TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTE
CCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EHNEKK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA