| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947947
Identifier: 109947947
GI number: 109947947
Start: 1257548
End: 1258468
Strand: Reverse
Name: 109947947
Synonym: Hac_1450
Alternate gene names: NA
Gene position: 1258468-1257548 (Counterclockwise)
Preceding gene: 109947948
Following gene: 109947924
Centisome position: 80.99
GC content: 39.96
Gene sequence:
>921_bases TTGAAACGGATTTTATTTCTTTTAACGGCGACAGTTTTTTTGCTTAATGCAGATACGACTATCAGCACTACGGTTGATCC GAATGTTATGTTTTATGACAAATCCACAGGGAATGTGAAAAAGGATCGCAAAAGAGTCTTAAAAAACATGGTTAATTTGG AAAAAGAGCGCGTGAAGAGTTTTAACGAGTATTCCGAAACCAAGATGAGTAAGGGCGATTTAGCCGCTTTTGGAGCTTTC TTTAAAGCGAGTTTGGAAAGCTGTGTGGAGCAAAAGGTTTGTTATTATGAGCATAAAGATGGCAAAGTTTCTTTTGTGGT GAATGACAGAGAAAAGTTTTATAAACATGTGCTTAAAGATTTAGGGACAGAGCTTTCACTCCCTTTGTTCAACTGGCTTT ATAAGGGCTCAGATTTTGGGGCTTTGCATGAGCAGTTTGGGGATATGTATGATGGGTATATCAAATATCTGATCAGCATG GTTAGGGTGAGCCAAAAAGAAAAGGCTAAAAAAGTGGATGCAACCGCTCTTAAAGAAATGGAAGAATTAGCTAAGAAAAA CACTGAAGAGGCATTCCAAAAAAGAAGCGATGGGGAGATCCAATCTCATAGCGACAGCCCTGATTTCATAGGGAATTCCC AAAAAGTCAAGAACGACGCCACTCCAACTCCAGTCCCTTTGATCGGTAATGTTGGCAATAACGCTAATGCTAACACTAAT ACCAACGCATCCAAAGAAACAGCTTCAAAAGAGGAAGTGTCTCCATCACAAGAGGCGTCTCCGTCAAAAAAGAAAAAGAA AGCCAAGAAAAAGCGCCGTCTCTCTAAAAAAGAGAAGCGACAAGCCTTGCAACAAGAGCTTGAAAAGCACGGCAACTCTA ACGAGTCTCATAAAACCGAAGAACATAACGAGAAAAAATAG
Upstream 100 bases:
>100_bases ACTGAAATAACTTGCATTCTAGATGGGTTTTATAAACAAAAGAGGACTTAATGAGAAGCAGTATCTATTTTTGTTGCGAT GATGTATATAGGAGTTTGGT
Downstream 100 bases:
>100_bases CCGTCTTGCCCTTTTGAAAAAGAGAGCTCTTATAACTTTTTTTAAAGCCACTGCCCCCTAAAACCGCCGTTTTTTAAAAT CTTTAGGCTTTGAGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKSFNEYSETKMSKGDLAAFGAF FKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISM VRVSQKEKAKKVDATALKEMEELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTEEHNEKK
Sequences:
>Translated_306_residues MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKSFNEYSETKMSKGDLAAFGAF FKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISM VRVSQKEKAKKVDATALKEMEELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTEEHNEKK >Mature_306_residues MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKSFNEYSETKMSKGDLAAFGAF FKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISM VRVSQKEKAKKVDATALKEMEELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTEEHNEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34768; Mature: 34768
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKS CHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH FNEYSETKMSKGDLAAFGAFFKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHH LGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKAKKVDATALKEM HCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCC TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTE CCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EHNEKK HHCCCC >Mature Secondary Structure MKRILFLLTATVFLLNADTTISTTVDPNVMFYDKSTGNVKKDRKRVLKNMVNLEKERVKS CHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH FNEYSETKMSKGDLAAFGAFFKASLESCVEQKVCYYEHKDGKVSFVVNDREKFYKHVLKD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHH LGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKAKKVDATALKEM HCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELAKKNTEEAFQKRSDGEIQSHSDSPDFIGNSQKVKNDATPTPVPLIGNVGNNANANTN HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCC TNASKETASKEEVSPSQEASPSKKKKKAKKKRRLSKKEKRQALQQELEKHGNSNESHKTE CCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EHNEKK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA