Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947915

Identifier: 109947915

GI number: 109947915

Start: 1224640

End: 1226112

Strand: Reverse

Name: 109947915

Synonym: Hac_1414

Alternate gene names: NA

Gene position: 1226112-1224640 (Counterclockwise)

Preceding gene: 109947916

Following gene: 162139479

Centisome position: 78.9

GC content: 38.42

Gene sequence:

>1473_bases
ATGAATAAAGAAGCTAGATTTTATAACCTTTTTTCTTTAGCGGTTTTGGGGATTTTGATCTTCCCTGTGGGTTTGGCGAA
TTTTTATTTTGGCTATGTTTTGAAAGATTCCCCTTGTATTTTTTGCTGGGCGCAACGCATCAACATGATTTTAATAGGGG
CGGTGGCGCTTTTGGTGGTGCGTTTTGGGTTTAAGCCTAAATATATCGCCTTGTTGTTGCTCATGGCTAGTAGCGGGCTG
TATGAGAGCTTTTATCATACCGGTAGCCATGCATTAGAAGATGTGGGGCAAGGCTTTGCACTCGCTATTTTAGGCTTGCA
CACGCAGTTTTGGGCGCTTTTTGTCTTTTTTAGCGTGGTGGTGTCTTTAGCGCTTCTGCTCTTTTTTTCCCCGAATATTC
ACAATTTTAAAGATCGTTCATTAAACATGCTCCAAAAAAGCGCTTTTTATATTTTCTTTATTGTGGTGGGCTCTAATGCA
ATGCAGGCGTTTTTTTCTACGGGGCCTTTCCCCTACATAGGGCAAAGCGATCCGGTGCGGTTTTCTTGGAATTTGAAAGA
ATCTGTTTGGTCTATGGAGAATTGGGTTCATTTGAAATTCCCAAGAAGCGTTTTTGGCAGAAGGGATGTGGGTGAGCCTT
TGAAATTGAGCGCTTTACCTAAAGACAATGATTATGATCATTCGCCTTTAGAAATCGCTAAAACCTTAAAAATAGAAAAA
AAAGAAGAGCTTTCTTTGAAACTTAATGGCACGATCACGGATTTGAACTTTAATGAAGACAACGCAATCCTTACTACAGA
AAACCAAGGTCTTTATCTTGTGGGTAACGATTTAAAAACCATTCATAGCTACATGGTTTTAGATAGTTATTATAGCGCGA
CGGTGGGGTCGTTTGTGGGGGCAGATTTCAATGAAGATGAAAACATTGTGATCATGGGCAATAATAAAACGAGCGTAGAA
ATCACTCCTAACAAAAACGCTAACGCGCTTAAAAATTACCCTTATTTTTTAGAGGGGGCTAATTTTTTTGATGAAGTGGA
GCGCAACCGCTTAAAAACTTCTAGGGCGAAAAATTATTATATTAGCGCTGCAAGAAGAGGGGCTAAATTGACTTATTTGA
TCACCGCTCCTAATAAACGCTATAAGGATTTGATTATCATCTCCATGCTCAATAGCGATAAACAAGTGCATGCGGAGTCT
CTTCTTGAATTAGGTCATGCTAAGCTTAAAGAAAAAAGGGAGTTGGGTGAATTAGTTATTAGCGCGTTAGCTTTAAAAGA
CAATAAACTTTATGCAATCAGCAAAGAATTTAACACGCTTTTAGTCATAGACCCTACAAAAGAAGAGATCCTTGAAGTTT
ATGGCTTGCCTAAAGAGATTAAAAATATCAGCGCTGGGGGGTTTAGAAATAATGAACTTGTCCTTGTTAGCTATGAGAAT
AATAAAAATATTCTCTATACCCTTAATTTTTAA

Upstream 100 bases:

>100_bases
GGGCGTTTGGGATTTTGGTTATTGTGTGGTTAGTGGAGCTCATTATTTTTATAGCCCATAGCTCTAGCGTTTTGCCTAAT
ATGAATTTATAGGGGGATAC

Downstream 100 bases:

>100_bases
ACTCTTTTAAAGCTGCTTTTTTTTAATATACTGACGCATTAGAAGATGGTCGCTATTTTAGAATAGAGGAAAGTCCGGGC
TACATTAGACAAAATTCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Disulphide Bond Formation Protein DsbB; Disulfide Bond Formation Protein DsbB Family; Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB; Dsbb-Like Protein

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MNKEARFYNLFSLAVLGILIFPVGLANFYFGYVLKDSPCIFCWAQRINMILIGAVALLVVRFGFKPKYIALLLLMASSGL
YESFYHTGSHALEDVGQGFALAILGLHTQFWALFVFFSVVVSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNA
MQAFFSTGPFPYIGQSDPVRFSWNLKESVWSMENWVHLKFPRSVFGRRDVGEPLKLSALPKDNDYDHSPLEIAKTLKIEK
KEELSLKLNGTITDLNFNEDNAILTTENQGLYLVGNDLKTIHSYMVLDSYYSATVGSFVGADFNEDENIVIMGNNKTSVE
ITPNKNANALKNYPYFLEGANFFDEVERNRLKTSRAKNYYISAARRGAKLTYLITAPNKRYKDLIIISMLNSDKQVHAES
LLELGHAKLKEKRELGELVISALALKDNKLYAISKEFNTLLVIDPTKEEILEVYGLPKEIKNISAGGFRNNELVLVSYEN
NKNILYTLNF

Sequences:

>Translated_490_residues
MNKEARFYNLFSLAVLGILIFPVGLANFYFGYVLKDSPCIFCWAQRINMILIGAVALLVVRFGFKPKYIALLLLMASSGL
YESFYHTGSHALEDVGQGFALAILGLHTQFWALFVFFSVVVSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNA
MQAFFSTGPFPYIGQSDPVRFSWNLKESVWSMENWVHLKFPRSVFGRRDVGEPLKLSALPKDNDYDHSPLEIAKTLKIEK
KEELSLKLNGTITDLNFNEDNAILTTENQGLYLVGNDLKTIHSYMVLDSYYSATVGSFVGADFNEDENIVIMGNNKTSVE
ITPNKNANALKNYPYFLEGANFFDEVERNRLKTSRAKNYYISAARRGAKLTYLITAPNKRYKDLIIISMLNSDKQVHAES
LLELGHAKLKEKRELGELVISALALKDNKLYAISKEFNTLLVIDPTKEEILEVYGLPKEIKNISAGGFRNNELVLVSYEN
NKNILYTLNF
>Mature_490_residues
MNKEARFYNLFSLAVLGILIFPVGLANFYFGYVLKDSPCIFCWAQRINMILIGAVALLVVRFGFKPKYIALLLLMASSGL
YESFYHTGSHALEDVGQGFALAILGLHTQFWALFVFFSVVVSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNA
MQAFFSTGPFPYIGQSDPVRFSWNLKESVWSMENWVHLKFPRSVFGRRDVGEPLKLSALPKDNDYDHSPLEIAKTLKIEK
KEELSLKLNGTITDLNFNEDNAILTTENQGLYLVGNDLKTIHSYMVLDSYYSATVGSFVGADFNEDENIVIMGNNKTSVE
ITPNKNANALKNYPYFLEGANFFDEVERNRLKTSRAKNYYISAARRGAKLTYLITAPNKRYKDLIIISMLNSDKQVHAES
LLELGHAKLKEKRELGELVISALALKDNKLYAISKEFNTLLVIDPTKEEILEVYGLPKEIKNISAGGFRNNELVLVSYEN
NKNILYTLNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55552; Mature: 55552

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEARFYNLFSLAVLGILIFPVGLANFYFGYVLKDSPCIFCWAQRINMILIGAVALLVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHCCHHHHHHHHHHH
RFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQFWALFVFFSVV
HCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
VSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNAMQAFFSTGPFPYIGQSDPVR
HHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEEECCHHHHHHHCCCCCCCCCCCCCEE
FSWNLKESVWSMENWVHLKFPRSVFGRRDVGEPLKLSALPKDNDYDHSPLEIAKTLKIEK
EEECHHHHHHHHHCEEEEECCHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC
KEELSLKLNGTITDLNFNEDNAILTTENQGLYLVGNDLKTIHSYMVLDSYYSATVGSFVG
CCCEEEEECCEEEEEEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
ADFNEDENIVIMGNNKTSVEITPNKNANALKNYPYFLEGANFFDEVERNRLKTSRAKNYY
CCCCCCCCEEEEECCCEEEEECCCCCCCHHHCCCEEECCCCHHHHHHHHHHHHHHCCCEE
ISAARRGAKLTYLITAPNKRYKDLIIISMLNSDKQVHAESLLELGHAKLKEKRELGELVI
EEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SALALKDNKLYAISKEFNTLLVIDPTKEEILEVYGLPKEIKNISAGGFRNNELVLVSYEN
HHHHCCCCEEEEEECCCCEEEEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEC
NKNILYTLNF
CCEEEEEECC
>Mature Secondary Structure
MNKEARFYNLFSLAVLGILIFPVGLANFYFGYVLKDSPCIFCWAQRINMILIGAVALLVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHCCHHHHHHHHHHH
RFGFKPKYIALLLLMASSGLYESFYHTGSHALEDVGQGFALAILGLHTQFWALFVFFSVV
HCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
VSLALLLFFSPNIHNFKDRSLNMLQKSAFYIFFIVVGSNAMQAFFSTGPFPYIGQSDPVR
HHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEEECCHHHHHHHCCCCCCCCCCCCCEE
FSWNLKESVWSMENWVHLKFPRSVFGRRDVGEPLKLSALPKDNDYDHSPLEIAKTLKIEK
EEECHHHHHHHHHCEEEEECCHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC
KEELSLKLNGTITDLNFNEDNAILTTENQGLYLVGNDLKTIHSYMVLDSYYSATVGSFVG
CCCEEEEECCEEEEEEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
ADFNEDENIVIMGNNKTSVEITPNKNANALKNYPYFLEGANFFDEVERNRLKTSRAKNYY
CCCCCCCCEEEEECCCEEEEECCCCCCCHHHCCCEEECCCCHHHHHHHHHHHHHHCCCEE
ISAARRGAKLTYLITAPNKRYKDLIIISMLNSDKQVHAESLLELGHAKLKEKRELGELVI
EEECCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SALALKDNKLYAISKEFNTLLVIDPTKEEILEVYGLPKEIKNISAGGFRNNELVLVSYEN
HHHHCCCCEEEEEECCCCEEEEECCCHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEC
NKNILYTLNF
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA