Click here to switch to the map view.

The map label for this gene is 162139479

Identifier: 162139479

GI number: 162139479

Start: 1223587

End: 1224165

Strand: Reverse

Name: 162139479

Synonym: Hac_1412

Alternate gene names: NA

Gene position: 1224165-1223587 (Counterclockwise)

Preceding gene: 109947915

Following gene: 109947905

Centisome position: 78.78

GC content: 39.72

Gene sequence:

>579_bases
GTGTTAGAAAAATCTTTCTTAAAAAGCAAGCAGTTAGTTTTATGCGGGTTGGGCGTTTTGATGTTGCAAGCTTGCACTTG
CCCAAACACTTCACAAAAAAACTCTTTTTTGCAAGATGTGCCTTATTGGATGCTGCAAAATCGCAGCCAATATGTGACGC
AAGGGGTGGATAGCTCGCACATTGTAGATGGTAAGAAAACTGAAGAGATAGAAACAATCGCCACTAAAAGGGCGACAATG
AGGGTGGCACAAAATATCGTGCACAAGCTTAAAGAGGCTTACCTCTCCAAATCCAATCGCATCAAGCAAAAGATCACTAA
TGAAATGTTTGTCCAAATGACGCAACCTGTTTTTGACAGCTTGATGAATGTGGATCGTTTGGGGATTTATATCAACCCTA
ATAATCAAGAAGTGTTTGCGTTGGTGCGCGCTCGATCCTTTGATAAGGATGTTTTGAGTGAAGGGTTGCATAAATTATCT
TTGGATAATCAAGCGGTGAGCATTCTTATTTCTAAAGTGGATGAAATCTTTAAAGCTTCTATTAATTACGGCGATGTTAA
AGTCCCTATAAGCATGTGA

Upstream 100 bases:

>100_bases
CAAATATTTAATCGCTTTATTTTATTTTTTTTCCTAGTTATTGCTTAAAACCTTAGAGATTTGTGTTACACTCTGTAAAA
TTAAAATCAAAGGGGATAGC

Downstream 100 bases:

>100_bases
GCTTAAAACAATAAGGGTTCTTCGCCACCGTCGGTTTTTTTGGGGGTGGGCGTGATGGAATTGGGGGTTGAATAGTAGGG
GATTTTATCCACAACTTCTT

Product: tumor necrosis factor alpha-inducing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLEKSFLKSKQLVLCGLGVLMLQACTCPNTSQKNSFLQDVPYWMLQNRSQYVTQGVDSSHIVDGKKTEEIETIATKRATM
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFVQMTQPVFDSLMNVDRLGIYINPNNQEVFALVRARSFDKDVLSEGLHKLS
LDNQAVSILISKVDEIFKASINYGDVKVPISM

Sequences:

>Translated_192_residues
MLEKSFLKSKQLVLCGLGVLMLQACTCPNTSQKNSFLQDVPYWMLQNRSQYVTQGVDSSHIVDGKKTEEIETIATKRATM
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFVQMTQPVFDSLMNVDRLGIYINPNNQEVFALVRARSFDKDVLSEGLHKLS
LDNQAVSILISKVDEIFKASINYGDVKVPISM
>Mature_192_residues
MLEKSFLKSKQLVLCGLGVLMLQACTCPNTSQKNSFLQDVPYWMLQNRSQYVTQGVDSSHIVDGKKTEEIETIATKRATM
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFVQMTQPVFDSLMNVDRLGIYINPNNQEVFALVRARSFDKDVLSEGLHKLS
LDNQAVSILISKVDEIFKASINYGDVKVPISM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21762; Mature: 21762

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKSFLKSKQLVLCGLGVLMLQACTCPNTSQKNSFLQDVPYWMLQNRSQYVTQGVDSSH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCC
IVDGKKTEEIETIATKRATMRVAQNIVHKLKEAYLSKSNRIKQKITNEMFVQMTQPVFDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVDRLGIYINPNNQEVFALVRARSFDKDVLSEGLHKLSLDNQAVSILISKVDEIFKAS
HHCHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
INYGDVKVPISM
CCCCCEEEEECC
>Mature Secondary Structure
MLEKSFLKSKQLVLCGLGVLMLQACTCPNTSQKNSFLQDVPYWMLQNRSQYVTQGVDSSH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCC
IVDGKKTEEIETIATKRATMRVAQNIVHKLKEAYLSKSNRIKQKITNEMFVQMTQPVFDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVDRLGIYINPNNQEVFALVRARSFDKDVLSEGLHKLSLDNQAVSILISKVDEIFKAS
HHCHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
INYGDVKVPISM
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA