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The map label for this gene is tolC

Identifier: 109947901

GI number: 109947901

Start: 1211581

End: 1213014

Strand: Reverse

Name: tolC

Synonym: Hac_1397

Alternate gene names: NA

Gene position: 1213014-1211581 (Counterclockwise)

Preceding gene: 109947902

Following gene: 109947900

Centisome position: 78.06

GC content: 39.96

Gene sequence:

>1434_bases
ATGAAGACGACTATAAGATTTGTTAGTTTGTGGGGCTTGTGTGCTGCTTTAGCTTTGGCGCAAACCCCTTCTAAAACCCC
AGATGAAATCAAAAAAATTCTCAACGATTACAGCCATAAGAATTTAACGCTCATTGATCCGCCGACAAGCTCTTTAGAGG
TATCGCCGAGTTTCTTACCCTCGCCTAAAGAAACAGCGACCACTATCAATCAAGAGATTGCTAAATACCACGAAAAAAGC
GATAAGGCCGCTTTAGGGTTGAATGAATTGCTTAAGGGGGCCACTTCAAATCTCAGTTTGCAAGCGCAAGAGCTCAAAGT
CAAGCAGGCGATGAAAAACCACACCATCTCTAAAGCGATGTTTTTGCCCACTTTGAACGCGAGTTATAATTTTAAAAATG
AAAATAGGGATACCCTAGACTTTAAGCACTATAACACGCAACAACTCCAAGCTGAAGTTAAACTGAATGTGTTTAATGGC
TTTAGCGATGTGAATAATGTCAGAGAAAAGGTTGCAACTTACCGCTCCACCGTGGCTAATTTAGAATACAGCCGCCAGAG
TGTGTATTTGCAAGTGGTGCAACAATATTATGAGTATTTTAACAACCTCGCTCGCATGATCGCTTTGCAAAAGAAATTAG
AGCAAATCAAAACGGATATTAAAAGGGTTACCAAGCTTTATAATGAAGGGCTAACCACGATTGATGATTTGCAAAGTTTG
AAAGCGCAAGGGAATTTGAGCGAATACGATATTTTGGATATGCAATTTGCTTTGGAGCAAAACCGCTTGACTTTGGAGTA
TTTGACCAACCTTAATGTGGAAAATTTAAAGAAAACCACGATTGATGCACCTGATTTGCAATTAAGAGAGAGACAAGATT
TGGCCTCTTTAAGGGAGCAAATCAATGCGATTAAATACCAAGGCAAGCAGCTCAATTACTACCCTAAAGTAGATGTGTAT
GACTCATGGCTTTATTGGATCCAAAAACCCGCCTACGCTTTGGGAGCCTTTGGGAACTTCTTCCCAGGCCAGCAAAACAC
CGCCGGAGTGACTGCGACCATGAATTTTTTGGATGATATAGGTTTGAGTTTGCAAAAACAATCCATCATGTTAGGCAGAT
TGGCGAATGAAAAAACCTTGGCTTATAAAAAGTTAGAGCAAGAAAAAGACGAACAACTTTACAGAAAGTCGCTTGATATT
GCTAGGGCTAAGATTGAATCTTCCAAAGCTAGTTTGGATGCGGCTAACCTTTCTTTTGCCAATATTAAGAGAAAATACGA
CGCTAATATAGTGGATTTCACCACTTATTTGAGGGGTTTAACCACTCGCTTTGATGCCGAAGTGGCTTACAATTTAGCGC
TCAACAATTATGAAGTACAAAAAGCCAATTACATTTTCAACAGTGGGCATAAAATAGACGACTATGTGCATTGA

Upstream 100 bases:

>100_bases
TAATTTAGGGCATGGGATGTTGCCGGATTTACCTAGAGAAAATGCGAAATATTTAGTGCAATTAGTGCATAATAAAACCA
AGCACTAGGGGGTTATTTTA

Downstream 100 bases:

>100_bases
TTAAAGGGATGAAATGATACGAAAAATTTTAATAGGGTTTTTTTTAAGTCTTTTGAGTTTGGAAGCTGGTGAGAAAGTGT
ATGCGATTTTCAATGTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Component Of Efflux System; Outer-Membrane Protein Of HefABC Efflux System HefA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKTTIRFVSLWGLCAALALAQTPSKTPDEIKKILNDYSHKNLTLIDPPTSSLEVSPSFLPSPKETATTINQEIAKYHEKS
DKAALGLNELLKGATSNLSLQAQELKVKQAMKNHTISKAMFLPTLNASYNFKNENRDTLDFKHYNTQQLQAEVKLNVFNG
FSDVNNVREKVATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYNEGLTTIDDLQSL
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLNVENLKKTTIDAPDLQLRERQDLASLREQINAIKYQGKQLNYYPKVDVY
DSWLYWIQKPAYALGAFGNFFPGQQNTAGVTATMNFLDDIGLSLQKQSIMLGRLANEKTLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANIVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH

Sequences:

>Translated_477_residues
MKTTIRFVSLWGLCAALALAQTPSKTPDEIKKILNDYSHKNLTLIDPPTSSLEVSPSFLPSPKETATTINQEIAKYHEKS
DKAALGLNELLKGATSNLSLQAQELKVKQAMKNHTISKAMFLPTLNASYNFKNENRDTLDFKHYNTQQLQAEVKLNVFNG
FSDVNNVREKVATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYNEGLTTIDDLQSL
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLNVENLKKTTIDAPDLQLRERQDLASLREQINAIKYQGKQLNYYPKVDVY
DSWLYWIQKPAYALGAFGNFFPGQQNTAGVTATMNFLDDIGLSLQKQSIMLGRLANEKTLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANIVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
>Mature_477_residues
MKTTIRFVSLWGLCAALALAQTPSKTPDEIKKILNDYSHKNLTLIDPPTSSLEVSPSFLPSPKETATTINQEIAKYHEKS
DKAALGLNELLKGATSNLSLQAQELKVKQAMKNHTISKAMFLPTLNASYNFKNENRDTLDFKHYNTQQLQAEVKLNVFNG
FSDVNNVREKVATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYNEGLTTIDDLQSL
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLNVENLKKTTIDAPDLQLRERQDLASLREQINAIKYQGKQLNYYPKVDVY
DSWLYWIQKPAYALGAFGNFFPGQQNTAGVTATMNFLDDIGLSLQKQSIMLGRLANEKTLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANIVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54553; Mature: 54553

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTIRFVSLWGLCAALALAQTPSKTPDEIKKILNDYSHKNLTLIDPPTSSLEVSPSFLP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCC
SPKETATTINQEIAKYHEKSDKAALGLNELLKGATSNLSLQAQELKVKQAMKNHTISKAM
CCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHH
FLPTLNASYNFKNENRDTLDFKHYNTQQLQAEVKLNVFNGFSDVNNVREKVATYRSTVAN
EEEECCCCCCCCCCCCCCCEECCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
LEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYNEGLTTIDDLQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLNVENLKKTTIDAPDLQLRERQDLASLREQ
HHCCCCCCCHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
INAIKYQGKQLNYYPKVDVYDSWLYWIQKPAYALGAFGNFFPGQQNTAGVTATMNFLDDI
HHHHHHCCCEECCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
GLSLQKQSIMLGRLANEKTLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
NIKRKYDANIVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MKTTIRFVSLWGLCAALALAQTPSKTPDEIKKILNDYSHKNLTLIDPPTSSLEVSPSFLP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCC
SPKETATTINQEIAKYHEKSDKAALGLNELLKGATSNLSLQAQELKVKQAMKNHTISKAM
CCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHH
FLPTLNASYNFKNENRDTLDFKHYNTQQLQAEVKLNVFNGFSDVNNVREKVATYRSTVAN
EEEECCCCCCCCCCCCCCCEECCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
LEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYNEGLTTIDDLQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAQGNLSEYDILDMQFALEQNRLTLEYLTNLNVENLKKTTIDAPDLQLRERQDLASLREQ
HHCCCCCCCHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
INAIKYQGKQLNYYPKVDVYDSWLYWIQKPAYALGAFGNFFPGQQNTAGVTATMNFLDDI
HHHHHHCCCEECCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
GLSLQKQSIMLGRLANEKTLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFA
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
NIKRKYDANIVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA