Click here to switch to the map view.

The map label for this gene is 109947861

Identifier: 109947861

GI number: 109947861

Start: 1171870

End: 1172298

Strand: Reverse

Name: 109947861

Synonym: Hac_1352

Alternate gene names: NA

Gene position: 1172298-1171870 (Counterclockwise)

Preceding gene: 109947862

Following gene: 109947860

Centisome position: 75.44

GC content: 32.4

Gene sequence:

>429_bases
ATGAAAAAATTCGCTTCTGTGTTGGTGCAATTAAAGACTCTTGCGTTAGAAAAAATAGAGCAAAAGCTTCAAAACAAACG
CCTGGAGTTGCAACAAAATGAACAACAGATTTTAAGCAAACAAATGGATTTGAGTGCGTTTAAAAACCCTAATTTTGGGG
GAATGAGCCTTTTTTTACAAACCCAACAATTAAAAAGCGCTTTAAGGATAGAGATAGAGCATTACCAACAAGAATGCGAA
ATTTTGCACGAAAGTTTAAAAATTTTAGAAAAAGACTATCTTTTGGCTAATCAGGAACTAGAAAAAGCTAAAATCATTTT
AGAAAAAGAAAAACAAAAAGAAAAAGAAATCATGGAGAAAAAAGAGCAGGCTCTTTTAGATGAAAACGCTATGATTTTAC
ATTGGCAAAAGGAGAGTTTGCATGCGTAA

Upstream 100 bases:

>100_bases
AGCAAAACACTAGAGAGTATATCCGTTTTATTGAAGAAGAAGTGGGGGTAAAAATCCGCCTTATTTCTACAAGCCCTGAA
AGAGAAGACACGATTTTTCT

Downstream 100 bases:

>100_bases
AATCTTACTCACAGGCTTTGTTTTACAAGCGCTTTTTAGCGAAGAAGCCACGCAAGAATTGTTGCAATGTTCTGCGATTT
TTGAATCTAAAAAAGCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKKFASVLVQLKTLALEKIEQKLQNKRLELQQNEQQILSKQMDLSAFKNPNFGGMSLFLQTQQLKSALRIEIEHYQQECE
ILHESLKILEKDYLLANQELEKAKIILEKEKQKEKEIMEKKEQALLDENAMILHWQKESLHA

Sequences:

>Translated_142_residues
MKKFASVLVQLKTLALEKIEQKLQNKRLELQQNEQQILSKQMDLSAFKNPNFGGMSLFLQTQQLKSALRIEIEHYQQECE
ILHESLKILEKDYLLANQELEKAKIILEKEKQKEKEIMEKKEQALLDENAMILHWQKESLHA
>Mature_142_residues
MKKFASVLVQLKTLALEKIEQKLQNKRLELQQNEQQILSKQMDLSAFKNPNFGGMSLFLQTQQLKSALRIEIEHYQQECE
ILHESLKILEKDYLLANQELEKAKIILEKEKQKEKEIMEKKEQALLDENAMILHWQKESLHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16802; Mature: 16802

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFASVLVQLKTLALEKIEQKLQNKRLELQQNEQQILSKQMDLSAFKNPNFGGMSLFLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TQQLKSALRIEIEHYQQECEILHESLKILEKDYLLANQELEKAKIILEKEKQKEKEIMEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQALLDENAMILHWQKESLHA
HHHHHHCCCCEEEEECHHCCCC
>Mature Secondary Structure
MKKFASVLVQLKTLALEKIEQKLQNKRLELQQNEQQILSKQMDLSAFKNPNFGGMSLFLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
TQQLKSALRIEIEHYQQECEILHESLKILEKDYLLANQELEKAKIILEKEKQKEKEIMEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQALLDENAMILHWQKESLHA
HHHHHHCCCCEEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA