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The map label for this gene is pgbB [H]

Identifier: 109947751

GI number: 109947751

Start: 1061197

End: 1062873

Strand: Reverse

Name: pgbB [H]

Synonym: Hac_1226

Alternate gene names: 109947751

Gene position: 1062873-1061197 (Counterclockwise)

Preceding gene: 109947752

Following gene: 109947750

Centisome position: 68.4

GC content: 38.88

Gene sequence:

>1677_bases
ATGAACAAACCATTTTTAATCTTACTGACAGCCTTGATTGTCTTTAGTGGCTGTAATACGAGGAAATATTTCAAACCCGC
CAAATACCAGATTAGAGGCGAAGCACCTTTTTCTAACCACTTGCAAGAGAGTATTGTGTCGTCCAATCGTAATGGAGCGA
TTTTAAAAAATGGGGCGGTGATAGGTCGTGATGGTTTGACGCAGTTAAGAATCGGTAAGAATTTCAATTATGAAAGCAGT
TTTTTAAATGAGAGTCAAGGGTTTTTTATTCTCGCGCAAGATTGTTTGAATAAGATTGATAAAAAAACAAGAAAAGGCAA
GGTGGCTAAAAGTAAAGAAACGGAGCTAAAATTAAAGGGCGTTGAATCAGAAGTTCAAGATAAAGCCTGCCACCAGGTGG
AATTGATTAGCTCTAACCCTAACGCTAGCCAAAAATCCATCATTATCCCTTTGGAGACTTTTGCTTTGAGCGCGAGCGTT
AAGGGGAATCTTTTGGGGGTGGTGTTAGCGGATAATTCAGCGAATTTATACGATCTAAATTCTCAAAAACTGCTTTTTAG
CGAGAAAGGTTCTCCAAGCACTGCGATCAATTCCTTGACGGCGATGCCTATTTTTATGGACACGGTCGTGGTGTTCCCTA
TGTTAGATGGGCGCTTATTGGTCGTGGATTATGTGCATGGAAACCCTACACCTATCAGGAATATCGTGATCAATAGCGAG
AAATTTTTCAACAATATCACTTACCTTATTGTAGATGGCAATAATATGATCGCTTCTACGGGAAAACGCATCCTCTCGGT
GGTGAGCGGTCAAGAGTTCAACTACGATGGGGATATTGTGGATTTGCTCTATGATAAGGGGACTCTATACGCGCTCACGC
TGGATGGGCAGATCTTGCAAATGGATAAGAGTTTGAGGGAATTAAACAGCGTGAAATTACCCTTTGCTTCGCTCAATACG
ATTGTATTAAACCACAATAAATTGTATTCTTTAGAAAAGCGTGGCTATGTGATAGAAGTGGATTTGAATGATTTTAACTC
GTATAATATATATAAAATCCCATCTATCGGCAGTTTTAAGCTTTTTTCATCCAATCGTTTGGATAAAGGGGTGTTTTATG
GTAAAAATCGGGTGTATTATGACCGCTATTTTTTAGATTATAACGAGTTTAACCCCAAGCTTTACTCCGTTGTGGCAAAA
CCTTTACCTAAAAAAGGAAAAGAAAATTCTCCGATTTATTTGCAAGAAAGGCATAAAACTAGAGAAGTGAAACAGCCTTT
AAAAGAGGAAAAAATCAAACCAACTCAAGGGAATAGCGGTTTTGAAGAAGAAGAGATTAAGGCTAAAAGGCGCGATATAG
ATCAAGAACCCAACAAGGATCAAAATAACGCCAACAATGAAAGCAATCAAAATAAAGAGGGCAACGAAAACGACGCCACT
AAAAAAGACGCAACAAAAAGCACTGAAAATGAAAACGCCCCTATTTCAAAAGAGAATGCTATTAAAAAAGAAGAGCCAAA
ACTCAGCCCTAGAGAAGAAAAACGCCGTTTGAAGGGAGAAAGGAAAAAAGCCAAAGCCGAACAAAGGGGTAGGGAATTTG
AACAAAGAGCGAGGGAGCAACAAGAAAGAGATGAAAAAGAGCTTGAAGAAAAAAGAAAGGCTTTAAAAGCGAAGTGA

Upstream 100 bases:

>100_bases
GCTATGATTTCTATGTTAAAACATTATGGCGTGTTAGAAAATATTGAAAAAAATTCTTCCAAACCAAAAAAATAAACGAT
TTAAGGGATGCATTGATTTG

Downstream 100 bases:

>100_bases
TCCCATGCCAGAATGTTTTAAAGAAGCAAAAGATTTGATTTTATGCGATATAGGTAATACATGCATCCATTTTGCACAAG
GCTATCAGCTCTTTTCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MNKPFLILLTALIVFSGCNTRKYFKPAKYQIRGEAPFSNHLQESIVSSNRNGAILKNGAVIGRDGLTQLRIGKNFNYESS
FLNESQGFFILAQDCLNKIDKKTRKGKVAKSKETELKLKGVESEVQDKACHQVELISSNPNASQKSIIIPLETFALSASV
KGNLLGVVLADNSANLYDLNSQKLLFSEKGSPSTAINSLTAMPIFMDTVVVFPMLDGRLLVVDYVHGNPTPIRNIVINSE
KFFNNITYLIVDGNNMIASTGKRILSVVSGQEFNYDGDIVDLLYDKGTLYALTLDGQILQMDKSLRELNSVKLPFASLNT
IVLNHNKLYSLEKRGYVIEVDLNDFNSYNIYKIPSIGSFKLFSSNRLDKGVFYGKNRVYYDRYFLDYNEFNPKLYSVVAK
PLPKKGKENSPIYLQERHKTREVKQPLKEEKIKPTQGNSGFEEEEIKAKRRDIDQEPNKDQNNANNESNQNKEGNENDAT
KKDATKSTENENAPISKENAIKKEEPKLSPREEKRRLKGERKKAKAEQRGREFEQRAREQQERDEKELEEKRKALKAK

Sequences:

>Translated_558_residues
MNKPFLILLTALIVFSGCNTRKYFKPAKYQIRGEAPFSNHLQESIVSSNRNGAILKNGAVIGRDGLTQLRIGKNFNYESS
FLNESQGFFILAQDCLNKIDKKTRKGKVAKSKETELKLKGVESEVQDKACHQVELISSNPNASQKSIIIPLETFALSASV
KGNLLGVVLADNSANLYDLNSQKLLFSEKGSPSTAINSLTAMPIFMDTVVVFPMLDGRLLVVDYVHGNPTPIRNIVINSE
KFFNNITYLIVDGNNMIASTGKRILSVVSGQEFNYDGDIVDLLYDKGTLYALTLDGQILQMDKSLRELNSVKLPFASLNT
IVLNHNKLYSLEKRGYVIEVDLNDFNSYNIYKIPSIGSFKLFSSNRLDKGVFYGKNRVYYDRYFLDYNEFNPKLYSVVAK
PLPKKGKENSPIYLQERHKTREVKQPLKEEKIKPTQGNSGFEEEEIKAKRRDIDQEPNKDQNNANNESNQNKEGNENDAT
KKDATKSTENENAPISKENAIKKEEPKLSPREEKRRLKGERKKAKAEQRGREFEQRAREQQERDEKELEEKRKALKAK
>Mature_558_residues
MNKPFLILLTALIVFSGCNTRKYFKPAKYQIRGEAPFSNHLQESIVSSNRNGAILKNGAVIGRDGLTQLRIGKNFNYESS
FLNESQGFFILAQDCLNKIDKKTRKGKVAKSKETELKLKGVESEVQDKACHQVELISSNPNASQKSIIIPLETFALSASV
KGNLLGVVLADNSANLYDLNSQKLLFSEKGSPSTAINSLTAMPIFMDTVVVFPMLDGRLLVVDYVHGNPTPIRNIVINSE
KFFNNITYLIVDGNNMIASTGKRILSVVSGQEFNYDGDIVDLLYDKGTLYALTLDGQILQMDKSLRELNSVKLPFASLNT
IVLNHNKLYSLEKRGYVIEVDLNDFNSYNIYKIPSIGSFKLFSSNRLDKGVFYGKNRVYYDRYFLDYNEFNPKLYSVVAK
PLPKKGKENSPIYLQERHKTREVKQPLKEEKIKPTQGNSGFEEEEIKAKRRDIDQEPNKDQNNANNESNQNKEGNENDAT
KKDATKSTENENAPISKENAIKKEEPKLSPREEKRRLKGERKKAKAEQRGREFEQRAREQQERDEKELEEKRKALKAK

Specific function: Binds plasminogen, specifically, and in a concentration and lysine-dependent manner. Plasminogen is the precursor of plasmin, a serine protease that cleaves fibrin, fibronectin, laminin and vitronectin. Acquisition of plasminogen/plasmin could enable H.py

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell surface (Probable). Note=The plasminogen-binding region is localized on the surface the bacterium (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015943
- InterPro:   IPR011046 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63379; Mature: 63379

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPFLILLTALIVFSGCNTRKYFKPAKYQIRGEAPFSNHLQESIVSSNRNGAILKNGAV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEECCEE
IGRDGLTQLRIGKNFNYESSFLNESQGFFILAQDCLNKIDKKTRKGKVAKSKETELKLKG
ECCCCCEEEEECCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
VESEVQDKACHQVELISSNPNASQKSIIIPLETFALSASVKGNLLGVVLADNSANLYDLN
CHHHHHHHHHCEEEEECCCCCCCCCEEEEEEHHEEEECCCCCCEEEEEEECCCCCEEECC
SQKLLFSEKGSPSTAINSLTAMPIFMDTVVVFPMLDGRLLVVDYVHGNPTPIRNIVINSE
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCH
KFFNNITYLIVDGNNMIASTGKRILSVVSGQEFNYDGDIVDLLYDKGTLYALTLDGQILQ
HHHCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCHHH
MDKSLRELNSVKLPFASLNTIVLNHNKLYSLEKRGYVIEVDLNDFNSYNIYKIPSIGSFK
HHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCCEEEEEECCCCCCCCEEECCCCCCEE
LFSSNRLDKGVFYGKNRVYYDRYFLDYNEFNPKLYSVVAKPLPKKGKENSPIYLQERHKT
EECCCCCCCCEEECCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEECHHHH
REVKQPLKEEKIKPTQGNSGFEEEEIKAKRRDIDQEPNKDQNNANNESNQNKEGNENDAT
HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KKDATKSTENENAPISKENAIKKEEPKLSPREEKRRLKGERKKAKAEQRGREFEQRAREQ
CHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERDEKELEEKRKALKAK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKPFLILLTALIVFSGCNTRKYFKPAKYQIRGEAPFSNHLQESIVSSNRNGAILKNGAV
CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEECCEE
IGRDGLTQLRIGKNFNYESSFLNESQGFFILAQDCLNKIDKKTRKGKVAKSKETELKLKG
ECCCCCEEEEECCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
VESEVQDKACHQVELISSNPNASQKSIIIPLETFALSASVKGNLLGVVLADNSANLYDLN
CHHHHHHHHHCEEEEECCCCCCCCCEEEEEEHHEEEECCCCCCEEEEEEECCCCCEEECC
SQKLLFSEKGSPSTAINSLTAMPIFMDTVVVFPMLDGRLLVVDYVHGNPTPIRNIVINSE
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCH
KFFNNITYLIVDGNNMIASTGKRILSVVSGQEFNYDGDIVDLLYDKGTLYALTLDGQILQ
HHHCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCHHH
MDKSLRELNSVKLPFASLNTIVLNHNKLYSLEKRGYVIEVDLNDFNSYNIYKIPSIGSFK
HHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCCEEEEEECCCCCCCCEEECCCCCCEE
LFSSNRLDKGVFYGKNRVYYDRYFLDYNEFNPKLYSVVAKPLPKKGKENSPIYLQERHKT
EECCCCCCCCEEECCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEECHHHH
REVKQPLKEEKIKPTQGNSGFEEEEIKAKRRDIDQEPNKDQNNANNESNQNKEGNENDAT
HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KKDATKSTENENAPISKENAIKKEEPKLSPREEKRRLKGERKKAKAEQRGREFEQRAREQ
CHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERDEKELEEKRKALKAK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]