| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is yvgW [H]
Identifier: 109947461
GI number: 109947461
Start: 797947
End: 800007
Strand: Reverse
Name: yvgW [H]
Synonym: Hac_0913
Alternate gene names: 109947461
Gene position: 800007-797947 (Counterclockwise)
Preceding gene: 109947462
Following gene: 109947460
Centisome position: 51.48
GC content: 41.05
Gene sequence:
>2061_bases ATGCAAGAATACCACATTCACAATTTGGATTGCCCTGATTGTGCAGCTAAATTGGAAAGGGATTTAAACAAACTGGACTG TGTGAAAAAAGCTCAAATCAATTTTAGCACCAGCAAGTTGTTTTTGGATACGAGCGATTTTGAAAAGGTTAAGGCTTTCA TTAAGCAAAACGAACCGCATTTGAGCCTGTCTTTTAAAGAAGCCGTAGAAAAGCCCTTGAGTTTTACCCCACTCATTACG ACAATTATTGTCTTTTTAGGCGCGATTTTAATCTTACGCTTAAACCCTAGCGCTTTCATTGAAAAGGCGGTGTTTGTGGT GTTAGCTTTAGTGTATCTCATAAGCGGTAAAGATGTGATTTTAGGGGCGTTTCGTGGGCTTAGAAAAGGGCAATTCTTTG ATGAAAACGCTCTCATGCTCATTGCGACTATTGCGGCTTTTTGCGTGGGGGCTTATGAAGAGAGTGTGTCTATTATTGTG TTTTATTCAGCGGGTGAGTTTTTGCAAAAACTCGCTATCTCGCGCTCTAAAAAATCCCTTAAGGCTTTAGTGGATGTCGC CCCTAATTTAGCCTACTTGAAAAAGGGCGATGAATTGGTGAGTGTTACGCCTGAAGATTTGCAAATCAATGATATTGTGG TGGTGAAAGTTGGCGAAAAAGTGCCTGTTGATGGCGTGGTGATTAAAGGCGAGAGTTTGCTAGATGAAAGGGCGTTGAGT GGGGAGTCCATGCCTATTAATGTCAGTGAAAACTCTAAAGTGCTTGGGGGGAGTTTGAATTTAAAGGCGGTGCTTGAAAT TAAAGTAGAAAAAATTTATAAAGATTCTTCTATCGCTAAAGTGGTGGATTTAGTCCAACAAGCCACGAATGAAAAGAGTG AAACAGAGAAATTTATCACTAAATTTTCACGCTACTACACCCCAAGCGTTTTATTTATTGCGTTAATGATCGCTGTATTA CCGCCCTTGTTTTCTATGGGGAGCTTTGATGAGTGGATTTATAGGGGGCTTGTGGCTTTAATGGTGAGCTGTCCTTGTGC ATTAGTGATTTCTGTGCCTTTAGGGTATTTTGGAGGCGTGGGAGCGGCGAGTAGGAAAGGTATTTTGATGAAAGGTGTGC ATGTTTTAGAGGTACTTACCCAAGCTAAAAGCATCGCCTTTGATAAAACCGGCACCTTAACTAAAGGCGTTTTTAAAGTG ATGGATATTGTGCCACAAAACAGGCATTCTAAAGAAGAAGTTTTGCATTACGCTTCTTGTTCGCAGCTCTTATCCACGCA CCCAATTGCTTTATCCATTCAAAAAGCTTGCGAGGAAATGTTAAAAGACAATCAGCACCAACATGACATTAAAAATTACG AAGAATTGAGCGGAATGGGGGTTAAAGCGCAATGCCATGCGGATTTGATCATCGCAGGGAATGAAAAAATGTTTGATAAA TTCAATATCGCGCACAGCCCTTCCCCACAAAATGGCACGATCGTGCATGTAGCTTTTAACCAAAATTATATAGGTTATAT CGTAATTAGCGATGAGATTAAAGATGACGCTATAGAGTGTTTAAGGGATTTAAAAGCACAAGGGATAGAAAATTTTTGCA TTTTGAGTGGGGATAGAAAAAGCGTGACAGAAAGCATTGCAAAAACTTTAGGCTGTGAATACCATGCGAGCTTGTTGCCT GAAGAAAAAACGAGCGTGTTTAAAAACTTTAAAGAGCGCTATAAAGCCCCGGCGATTTTTGTTGGCGATGGCATCAATGA TGCGCCAACTCTAGCGAGTGCTGATGTGGGGATTGGCATGGGGAAAGGATCAGAATTGAGTAAGCAAAGTGCGGACATTG TGATCACGAATGATTCTTTAAATTCATTAGTGAAAGTCCTAGCGATCGCTAAAAAAACTAAAAGCATTATTTGGCAAAAT ATCTTGTTTGCTTTAGGGATTAAGATGGTTTTTATCGTGCTAGGGCTTATGGGGGTAGCGAGCTTGTGGGAAGCCGTTTT TGGCGATGTGGGGGTTACGCTTTTAGCCTTGGCTAATTCCATGCGCGCGATGAGGGCTTAA
Upstream 100 bases:
>100_bases TGCGGACTTAAACGCTTGCGAGGGTATAGAAAAATCTCACATGCTTAAAGCGTTGAGTTTTAGAAAGATTTCTTAAAATT TTTTTAATAAGGGAGAGAAA
Downstream 100 bases:
>100_bases GAAAGAGCCTTTTTATCGCTAGTGCATTAAGAAGCTTAAAGGGGAAAAATGCATAAAATAGAGCAATTACTCCAAACTCT AGTGCTGATGGGGTGGAGTT
Product: heavy metal-transporting ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MQEYHIHNLDCPDCAAKLERDLNKLDCVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEAVEKPLSFTPLIT TIIVFLGAILILRLNPSAFIEKAVFVVLALVYLISGKDVILGAFRGLRKGQFFDENALMLIATIAAFCVGAYEESVSIIV FYSAGEFLQKLAISRSKKSLKALVDVAPNLAYLKKGDELVSVTPEDLQINDIVVVKVGEKVPVDGVVIKGESLLDERALS GESMPINVSENSKVLGGSLNLKAVLEIKVEKIYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVL PPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKV MDIVPQNRHSKEEVLHYASCSQLLSTHPIALSIQKACEEMLKDNQHQHDIKNYEELSGMGVKAQCHADLIIAGNEKMFDK FNIAHSPSPQNGTIVHVAFNQNYIGYIVISDEIKDDAIECLRDLKAQGIENFCILSGDRKSVTESIAKTLGCEYHASLLP EEKTSVFKNFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQN ILFALGIKMVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMRA
Sequences:
>Translated_686_residues MQEYHIHNLDCPDCAAKLERDLNKLDCVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEAVEKPLSFTPLIT TIIVFLGAILILRLNPSAFIEKAVFVVLALVYLISGKDVILGAFRGLRKGQFFDENALMLIATIAAFCVGAYEESVSIIV FYSAGEFLQKLAISRSKKSLKALVDVAPNLAYLKKGDELVSVTPEDLQINDIVVVKVGEKVPVDGVVIKGESLLDERALS GESMPINVSENSKVLGGSLNLKAVLEIKVEKIYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVL PPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKV MDIVPQNRHSKEEVLHYASCSQLLSTHPIALSIQKACEEMLKDNQHQHDIKNYEELSGMGVKAQCHADLIIAGNEKMFDK FNIAHSPSPQNGTIVHVAFNQNYIGYIVISDEIKDDAIECLRDLKAQGIENFCILSGDRKSVTESIAKTLGCEYHASLLP EEKTSVFKNFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQN ILFALGIKMVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMRA >Mature_686_residues MQEYHIHNLDCPDCAAKLERDLNKLDCVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPHLSLSFKEAVEKPLSFTPLIT TIIVFLGAILILRLNPSAFIEKAVFVVLALVYLISGKDVILGAFRGLRKGQFFDENALMLIATIAAFCVGAYEESVSIIV FYSAGEFLQKLAISRSKKSLKALVDVAPNLAYLKKGDELVSVTPEDLQINDIVVVKVGEKVPVDGVVIKGESLLDERALS GESMPINVSENSKVLGGSLNLKAVLEIKVEKIYKDSSIAKVVDLVQQATNEKSETEKFITKFSRYYTPSVLFIALMIAVL PPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGVGAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKV MDIVPQNRHSKEEVLHYASCSQLLSTHPIALSIQKACEEMLKDNQHQHDIKNYEELSGMGVKAQCHADLIIAGNEKMFDK FNIAHSPSPQNGTIVHVAFNQNYIGYIVISDEIKDDAIECLRDLKAQGIENFCILSGDRKSVTESIAKTLGCEYHASLLP EEKTSVFKNFKERYKAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQN ILFALGIKMVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMRA
Specific function: Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=798, Percent_Identity=24.812030075188, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI115529486, Length=697, Percent_Identity=26.8292682926829, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI55743073, Length=524, Percent_Identity=27.6717557251908, Blast_Score=176, Evalue=9e-44, Organism=Escherichia coli, GI1789879, Length=693, Percent_Identity=33.1890331890332, Blast_Score=356, Evalue=2e-99, Organism=Escherichia coli, GI1786691, Length=505, Percent_Identity=29.3069306930693, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI1786914, Length=504, Percent_Identity=24.6031746031746, Blast_Score=117, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17556548, Length=575, Percent_Identity=28.1739130434783, Blast_Score=178, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6320475, Length=540, Percent_Identity=27.037037037037, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6319772, Length=600, Percent_Identity=25.8333333333333, Blast_Score=187, Evalue=4e-48, Organism=Drosophila melanogaster, GI221329854, Length=570, Percent_Identity=24.5614035087719, Blast_Score=120, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3; =3.6.3.5 [H]
Molecular weight: Translated: 75034; Mature: 75034
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEYHIHNLDCPDCAAKLERDLNKLDCVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCC LSLSFKEAVEKPLSFTPLITTIIVFLGAILILRLNPSAFIEKAVFVVLALVYLISGKDVI EEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH LGAFRGLRKGQFFDENALMLIATIAAFCVGAYEESVSIIVFYSAGEFLQKLAISRSKKSL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH KALVDVAPNLAYLKKGDELVSVTPEDLQINDIVVVKVGEKVPVDGVVIKGESLLDERALS HHHHHHCCCHHHHHCCCCEEEECCCCEEECCEEEEEECCCCCCCCEEECCHHHHHHHHCC GESMPINVSENSKVLGGSLNLKAVLEIKVEKIYKDSSIAKVVDLVQQATNEKSETEKFIT CCCCEEEECCCCEEECCCCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH KFSRYYTPSVLFIALMIAVLPPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGV HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCC GAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKVMDIVPQNRHSKEEVLHYASC CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH SQLLSTHPIALSIQKACEEMLKDNQHQHDIKNYEELSGMGVKAQCHADLIIAGNEKMFDK HHHHHCCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECEEEEEECCCHHHHH FNIAHSPSPQNGTIVHVAFNQNYIGYIVISDEIKDDAIECLRDLKAQGIENFCILSGDRK CCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHH SVTESIAKTLGCEYHASLLPEEKTSVFKNFKERYKAPAIFVGDGINDAPTLASADVGIGM HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC GKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQNILFALGIKMVFIVLGLMGVA CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLWEAVFGDVGVTLLALANSMRAMRA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQEYHIHNLDCPDCAAKLERDLNKLDCVKKAQINFSTSKLFLDTSDFEKVKAFIKQNEPH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCC LSLSFKEAVEKPLSFTPLITTIIVFLGAILILRLNPSAFIEKAVFVVLALVYLISGKDVI EEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHH LGAFRGLRKGQFFDENALMLIATIAAFCVGAYEESVSIIVFYSAGEFLQKLAISRSKKSL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHH KALVDVAPNLAYLKKGDELVSVTPEDLQINDIVVVKVGEKVPVDGVVIKGESLLDERALS HHHHHHCCCHHHHHCCCCEEEECCCCEEECCEEEEEECCCCCCCCEEECCHHHHHHHHCC GESMPINVSENSKVLGGSLNLKAVLEIKVEKIYKDSSIAKVVDLVQQATNEKSETEKFIT CCCCEEEECCCCEEECCCCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH KFSRYYTPSVLFIALMIAVLPPLFSMGSFDEWIYRGLVALMVSCPCALVISVPLGYFGGV HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCC GAASRKGILMKGVHVLEVLTQAKSIAFDKTGTLTKGVFKVMDIVPQNRHSKEEVLHYASC CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH SQLLSTHPIALSIQKACEEMLKDNQHQHDIKNYEELSGMGVKAQCHADLIIAGNEKMFDK HHHHHCCCHHEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECEEEEEECCCHHHHH FNIAHSPSPQNGTIVHVAFNQNYIGYIVISDEIKDDAIECLRDLKAQGIENFCILSGDRK CCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHH SVTESIAKTLGCEYHASLLPEEKTSVFKNFKERYKAPAIFVGDGINDAPTLASADVGIGM HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC GKGSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQNILFALGIKMVFIVLGLMGVA CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLWEAVFGDVGVTLLALANSMRAMRA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]