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The map label for this gene is comM [H]

Identifier: 109947462

GI number: 109947462

Start: 800032

End: 801552

Strand: Reverse

Name: comM [H]

Synonym: Hac_0914

Alternate gene names: 109947462

Gene position: 801552-800032 (Counterclockwise)

Preceding gene: 109947463

Following gene: 109947461

Centisome position: 51.58

GC content: 39.32

Gene sequence:

>1521_bases
ATGATTAACACGATATTTTGCACAACCATGCAAAGGGGAGTAGCAGAAATCGTGGCTGTGGAAGCGACTTTCACGAGAGC
TTTACCGGCATTTGTGATTTCAGGGCTCGCTAATAATTCTATCCAAGAAGCCAAGCAGCGAGTCCAATCAGCCTTACAAA
ATAACGATTTCACTTTCCCGCCTTTAAAAATCACAATCAACCTTTCCCCTTCAGATTTGCCTAAATCAGGAAGTCATTTT
GACTTGCCCATCGCTCTTTTAATCGCTTTACAAAAACAAGAATTAAGCTGTAAAGAGTGGTTTGCTTTTGGGGAGTTAGG
GCTTGATGGTAAGATCAAACCCAATTCTAATATTTTCCCCATGCTTTTAGACATTGCCATTAAACGCCCCCATGCAAAAG
TCATCGTACCTAAAGCGAATGAAGAGCTTTTTTCGCTCATTCCTAACTTGCAATGCTTTTTCGTGGAGCATTTTAAAGAA
GCCTTAGAAATTTTACAAAACCCTGAAATTAAAGCACACACCCACATTAAAAATCTCCCTTTTGAAATGATAGAAATCCA
CCACAAAGAATATTATTTTTCAGACACCTACGCTTTAGATTTTAAAGAAGTTAAGGGGCAAGCTATCGCTAAAGAAGCCG
CCTTGATCGCTAGTGCTGGGTTTCATAACTTGCTTTTAGAAGGAAGCCCAGGGTGTGGTAAAAGCATGATTGTTAATCGC
ATGCGTTATATTTTACCCCCTTTAAGCTTGAATGAAATCTTAGAAGCCACAAAACTGCGTATTTTAAGCGAGCAAGACAG
CACCTATTACCCCTTAAGGAGCTTTAGAAACCCGCATCAGAGCGCTTCAAAATCTAGTATTTTAGGCTCAAGCTCTCTCA
AAGAGCCAAAACCTGGCGAAATCGCATTAGCGCATAACGGCATGCTTTTTTTTGATGAATTGCCCCATTTTAAAAAGGAT
ATTTTGGAAGCTTTAAGAGAGCCTTTAGAAAACAATAAATTAGTGATCTCGCGAGTGCATAGTAAGATTGAATACGAAAC
CTCCTTTTTATTTGTAGGAGCTCAAAACCCTTGCTTGTGTGGGAATTTGCTCAGCCAAACCAAGGCGTGCCGTTGTCAAG
ATAGAGAAATCACACAGTATAAAAACCGCTTGAGCGAGCCTTTTTTGGATAGGATTGATTTGTTTGTGCAAATGGAAGAG
GGGAGTTATAAAGACGCACCGTTGCATTCTTGGACTTCAAAAGAAATGCATCAATTGGTATTATTAGCTTTCAAACAGCA
AAAATTAAGAAAACAAAGCGTTTTTAATGGTAAACTTAATGAAGAACAGATAGAACAATTTTGCCCTTTAAACGCTGAAG
TGCAAAAGTTGTTAGAGCAGGCGGCTGAAAGGTTTAATCTGTCTATGCGCTCTGTCAATAAGGTCAAAAAGGTCGCTAGG
ACGATTGCGGACTTAAACGCTTGCGAGGGTATAGAAAAATCTCACATGCTTAAAGCGTTGAGTTTTAGAAAGATTTCTTA
A

Upstream 100 bases:

>100_bases
ATGGCGTGCTGTTTGTGGATAAATTGTCCATCTTGAAGCGTAAGAAATTTGAAAAAGAACTCAAAGAATTAAATAAAAAT
CCCAAAAACAAGTCCTAGCC

Downstream 100 bases:

>100_bases
AATTTTTTTAATAAGGGAGAGAAAATGCAAGAATACCACATTCACAATTTGGATTGCCCTGATTGTGCAGCTAAATTGGA
AAGGGATTTAAACAAACTGG

Product: sigma-54 interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MINTIFCTTMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELSCKEWFAFGELGLDGKIKPNSNIFPMLLDIAIKRPHAKVIVPKANEELFSLIPNLQCFFVEHFKE
ALEILQNPEIKAHTHIKNLPFEMIEIHHKEYYFSDTYALDFKEVKGQAIAKEAALIASAGFHNLLLEGSPGCGKSMIVNR
MRYILPPLSLNEILEATKLRILSEQDSTYYPLRSFRNPHQSASKSSILGSSSLKEPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYETSFLFVGAQNPCLCGNLLSQTKACRCQDREITQYKNRLSEPFLDRIDLFVQMEE
GSYKDAPLHSWTSKEMHQLVLLAFKQQKLRKQSVFNGKLNEEQIEQFCPLNAEVQKLLEQAAERFNLSMRSVNKVKKVAR
TIADLNACEGIEKSHMLKALSFRKIS

Sequences:

>Translated_506_residues
MINTIFCTTMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELSCKEWFAFGELGLDGKIKPNSNIFPMLLDIAIKRPHAKVIVPKANEELFSLIPNLQCFFVEHFKE
ALEILQNPEIKAHTHIKNLPFEMIEIHHKEYYFSDTYALDFKEVKGQAIAKEAALIASAGFHNLLLEGSPGCGKSMIVNR
MRYILPPLSLNEILEATKLRILSEQDSTYYPLRSFRNPHQSASKSSILGSSSLKEPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYETSFLFVGAQNPCLCGNLLSQTKACRCQDREITQYKNRLSEPFLDRIDLFVQMEE
GSYKDAPLHSWTSKEMHQLVLLAFKQQKLRKQSVFNGKLNEEQIEQFCPLNAEVQKLLEQAAERFNLSMRSVNKVKKVAR
TIADLNACEGIEKSHMLKALSFRKIS
>Mature_506_residues
MINTIFCTTMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELSCKEWFAFGELGLDGKIKPNSNIFPMLLDIAIKRPHAKVIVPKANEELFSLIPNLQCFFVEHFKE
ALEILQNPEIKAHTHIKNLPFEMIEIHHKEYYFSDTYALDFKEVKGQAIAKEAALIASAGFHNLLLEGSPGCGKSMIVNR
MRYILPPLSLNEILEATKLRILSEQDSTYYPLRSFRNPHQSASKSSILGSSSLKEPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYETSFLFVGAQNPCLCGNLLSQTKACRCQDREITQYKNRLSEPFLDRIDLFVQMEE
GSYKDAPLHSWTSKEMHQLVLLAFKQQKLRKQSVFNGKLNEEQIEQFCPLNAEVQKLLEQAAERFNLSMRSVNKVKKVAR
TIADLNACEGIEKSHMLKALSFRKIS

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=511, Percent_Identity=35.4207436399217, Blast_Score=294, Evalue=8e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 57313; Mature: 57313

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00676 SIGMA54_INTERACT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTIFCTTMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFP
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PLKITINLSPSDLPKSGSHFDLPIALLIALQKQELSCKEWFAFGELGLDGKIKPNSNIFP
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCHHH
MLLDIAIKRPHAKVIVPKANEELFSLIPNLQCFFVEHFKEALEILQNPEIKAHTHIKNLP
HHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCC
FEMIEIHHKEYYFSDTYALDFKEVKGQAIAKEAALIASAGFHNLLLEGSPGCGKSMIVNR
HHHHHHHHHHEEECCEEEECHHHHCCHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHH
MRYILPPLSLNEILEATKLRILSEQDSTYYPLRSFRNPHQSASKSSILGSSSLKEPKPGE
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCC
IALAHNGMLFFDELPHFKKDILEALREPLENNKLVISRVHSKIEYETSFLFVGAQNPCLC
EEEEECCEEEEHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHEEEEEEEEEECCCCCHH
GNLLSQTKACRCQDREITQYKNRLSEPFLDRIDLFVQMEEGSYKDAPLHSWTSKEMHQLV
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHH
LLAFKQQKLRKQSVFNGKLNEEQIEQFCPLNAEVQKLLEQAAERFNLSMRSVNKVKKVAR
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TIADLNACEGIEKSHMLKALSFRKIS
HHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MINTIFCTTMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFP
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PLKITINLSPSDLPKSGSHFDLPIALLIALQKQELSCKEWFAFGELGLDGKIKPNSNIFP
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCHHH
MLLDIAIKRPHAKVIVPKANEELFSLIPNLQCFFVEHFKEALEILQNPEIKAHTHIKNLP
HHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHCCC
FEMIEIHHKEYYFSDTYALDFKEVKGQAIAKEAALIASAGFHNLLLEGSPGCGKSMIVNR
HHHHHHHHHHEEECCEEEECHHHHCCHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHH
MRYILPPLSLNEILEATKLRILSEQDSTYYPLRSFRNPHQSASKSSILGSSSLKEPKPGE
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCC
IALAHNGMLFFDELPHFKKDILEALREPLENNKLVISRVHSKIEYETSFLFVGAQNPCLC
EEEEECCEEEEHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHEEEEEEEEEECCCCCHH
GNLLSQTKACRCQDREITQYKNRLSEPFLDRIDLFVQMEEGSYKDAPLHSWTSKEMHQLV
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHH
LLAFKQQKLRKQSVFNGKLNEEQIEQFCPLNAEVQKLLEQAAERFNLSMRSVNKVKKVAR
HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TIADLNACEGIEKSHMLKALSFRKIS
HHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]