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The map label for this gene is ykgB [C]

Identifier: 109947346

GI number: 109947346

Start: 679317

End: 679964

Strand: Reverse

Name: ykgB [C]

Synonym: Hac_0785

Alternate gene names: 109947346

Gene position: 679964-679317 (Counterclockwise)

Preceding gene: 109947347

Following gene: 109947344

Centisome position: 43.76

GC content: 40.59

Gene sequence:

>648_bases
ATGCAATCGTTAAAATCATTACTTGAAACGATTACAAAACTCCAGAATCTAGGTGGCTATTTGATGCATATAGCTATTTT
CATTATTTTTATTTGGATCGGAGGGCTTAAGTTTGTGCCCTATGAAGCCGAAGGGATCGCCCCTTTTGTAGCCAACTCCC
CCTTCTTTTCTTTCATGTATCAATTTGAAAAGCCCGCATACAAGCAACACAAAATGTCCGAATCCCAGTCCATGCAAGAA
GATTTGCAAGATAACCCTAAAATCATTGAAAACAAAGAATGGCATAAGGAAAACCACACTTATTTAGTGGCTGAAGCTTT
AGGGATTACGATTATGATCTTAGGTATTTTGGTGCTTTTAGGGCTTTGGATGCCTTTAATGGGCGTGATTGGAGGCTTGC
TTGTAGCTGGAATGACTATCACTACCCTATCTTTTTTATTCACAACGCCAGAAGTCTTTGTCAATCAGCATTTCCCATGG
TTATCTGGGGCAGGAAGGTTAGTGGTTAAAGATTTGGCGTTATTTGCTGGAGGCTTGTTTGTGGCTGGATTTGATGCGAG
ACGCTACTTAGAGGGGAAAGGGTTTTGCTTGATGAATCGCTCATCAGTAGGCATTAAAACTAAATGCTCTAGTGGGTGTT
GCTCTTAA

Upstream 100 bases:

>100_bases
GATCATTATTGTTTTATGATTGTGTTGCAATTAAACATAATGTGCTATCATTTACGAGCTGTTTTTAGCAATACAAAAAA
TATCTTAAAGGAATAAAACC

Downstream 100 bases:

>100_bases
AGGTCAATGCCTAAAGTAGGCTTTAAGCCTACTTTAAGAATCGCTTGAGTTGGTGCCTTTTTTGTAAATAATCGTCTTTA
AAATATGGCGTTTTACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQSLKSLLETITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYQFEKPAYKQHKMSESQSMQE
DLQDNPKIIENKEWHKENHTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDARRYLEGKGFCLMNRSSVGIKTKCSSGCCS

Sequences:

>Translated_215_residues
MQSLKSLLETITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYQFEKPAYKQHKMSESQSMQE
DLQDNPKIIENKEWHKENHTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDARRYLEGKGFCLMNRSSVGIKTKCSSGCCS
>Mature_215_residues
MQSLKSLLETITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYQFEKPAYKQHKMSESQSMQE
DLQDNPKIIENKEWHKENHTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDARRYLEGKGFCLMNRSSVGIKTKCSSGCCS

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0219 [H]

Homologues:

Organism=Escherichia coli, GI87081715, Length=211, Percent_Identity=37.4407582938389, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 23930; Mature: 23930

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLKSLLETITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMY
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHCCHHHHHHH
QFEKPAYKQHKMSESQSMQEDLQDNPKIIENKEWHKENHTYLVAEALGITIMILGILVLL
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH
GLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VAGFDARRYLEGKGFCLMNRSSVGIKTKCSSGCCS
EECHHHHHHHCCCCEEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure
MQSLKSLLETITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMY
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHCCHHHHHHH
QFEKPAYKQHKMSESQSMQEDLQDNPKIIENKEWHKENHTYLVAEALGITIMILGILVLL
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH
GLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VAGFDARRYLEGKGFCLMNRSSVGIKTKCSSGCCS
EECHHHHHHHCCCCEEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8219279 [H]