| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is mccC
Identifier: 109947329
GI number: 109947329
Start: 664803
End: 665966
Strand: Reverse
Name: mccC
Synonym: Hac_0765
Alternate gene names: NA
Gene position: 665966-664803 (Counterclockwise)
Preceding gene: 109947330
Following gene: 109947328
Centisome position: 42.86
GC content: 28.18
Gene sequence:
>1164_bases ATGAATAAAACACTAAAAATAAATATACTATCTTATTATTTAGCAACAATATTGCTTGTTATTGCCCAATCTTTACCTCA TGCCATTTTAACACCCTTATTACTCAATAAAGGGCTATCATTAAGTCAAATTATGATTATACAAGCCACCTACAGTTTGT GTGTTCTGATCTCTGAATATCCAAGCGGTGTATTAGCAGATTTAATGAATAGAAAGATACTTTTTATCGTTTCAAAATTG ATTTTAGTATGTAGTTTTTTTTGTATCTTATGGTTAGATAGTTTTATCAGCATGATTCTAGCATGGGGTATTTATGGATT ATCAAACGCACTAGAATCGGGCACTATTGATGCTACTCTCATTACCAATATTAAAGAGCAAAAAGAAGATTTATCAACAT TTATTGCAAAAAGCCACCAAATCAGTTTTATAGGGTTAATAGTTGGAAGTTGCTTGGGTTCGTTTTTATATTTAAAATAT GGCGTTTCTATGTATTACATATCAGTATTGCTCACATTACTATGCATCTCGGTTATTATTTTGTTTTTTAAAGATGATTC TTCTCACAAACTAGAAAAAAACAAACAATTTCAAATATTAAAGCAACATGTAAAAGAAAGTTTTAGAGAATTAAGAGACA AACCTCTACTTAAAAATCTGATCCTACTCAGCCTAATCTTACAAATATTCTTTCAAAGCCATTTTCAATTATGGCAAGCC TATTTACTAAACAAACAAATCACAGAAAACTACCTATTTATCTTTTATATTTCATTTCAAGTTATAGGAATCCTTATCCA TCTCTGTAACGCCAAATTATATAATAGATATATAACTACTATCATGATTTTTTTAATTGGACTTGCTAGTGTGCTGTTGT TGAGTACGAATATATTACTATTTGTTAGTTCCTATATGCTCAGTGTTGCTTTGTTTACATACATAGACTTTATTGTCAAT TATCAATTTTCTCTTTATGTTAGTAAAGAAAAAATCTCATCCCTTACTTCTTTAAAGTCTAGTTATTCACGAGTAATTTC TGTTCTTATTTTAGGTATAACAAGTTTAGAGTTGCTCATATTTTCTCCAACTATAGTTATCACTATACATTTTATGATTA CACTTATTTTAACATGCGTATTTTTGCATAAAACAAAACTTTAA
Upstream 100 bases:
>100_bases AATTGACAATAAAACTTTCAAAACACACACCTTATTATCTAGCATAGATTATAAATGTGCTTTTTGCTCTAATCACAATC AATAAGTAGAGCTTCTCAAT
Downstream 100 bases:
>100_bases CACACTTAATCCCACCACTTATCAATTGTGGGGCGTGATAGCCCTAATTCTCTATGACAAGCGATTTTTTTGCCTTGTAG GTTTTGAATACGCCATTCTT
Product: MccC-like protein
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; MccC-Like Protein; MFS-Domain-Containing Protein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MNKTLKINILSYYLATILLVIAQSLPHAILTPLLLNKGLSLSQIMIIQATYSLCVLISEYPSGVLADLMNRKILFIVSKL ILVCSFFCILWLDSFISMILAWGIYGLSNALESGTIDATLITNIKEQKEDLSTFIAKSHQISFIGLIVGSCLGSFLYLKY GVSMYYISVLLTLLCISVIILFFKDDSSHKLEKNKQFQILKQHVKESFRELRDKPLLKNLILLSLILQIFFQSHFQLWQA YLLNKQITENYLFIFYISFQVIGILIHLCNAKLYNRYITTIMIFLIGLASVLLLSTNILLFVSSYMLSVALFTYIDFIVN YQFSLYVSKEKISSLTSLKSSYSRVISVLILGITSLELLIFSPTIVITIHFMITLILTCVFLHKTKL
Sequences:
>Translated_387_residues MNKTLKINILSYYLATILLVIAQSLPHAILTPLLLNKGLSLSQIMIIQATYSLCVLISEYPSGVLADLMNRKILFIVSKL ILVCSFFCILWLDSFISMILAWGIYGLSNALESGTIDATLITNIKEQKEDLSTFIAKSHQISFIGLIVGSCLGSFLYLKY GVSMYYISVLLTLLCISVIILFFKDDSSHKLEKNKQFQILKQHVKESFRELRDKPLLKNLILLSLILQIFFQSHFQLWQA YLLNKQITENYLFIFYISFQVIGILIHLCNAKLYNRYITTIMIFLIGLASVLLLSTNILLFVSSYMLSVALFTYIDFIVN YQFSLYVSKEKISSLTSLKSSYSRVISVLILGITSLELLIFSPTIVITIHFMITLILTCVFLHKTKL >Mature_387_residues MNKTLKINILSYYLATILLVIAQSLPHAILTPLLLNKGLSLSQIMIIQATYSLCVLISEYPSGVLADLMNRKILFIVSKL ILVCSFFCILWLDSFISMILAWGIYGLSNALESGTIDATLITNIKEQKEDLSTFIAKSHQISFIGLIVGSCLGSFLYLKY GVSMYYISVLLTLLCISVIILFFKDDSSHKLEKNKQFQILKQHVKESFRELRDKPLLKNLILLSLILQIFFQSHFQLWQA YLLNKQITENYLFIFYISFQVIGILIHLCNAKLYNRYITTIMIFLIGLASVLLLSTNILLFVSSYMLSVALFTYIDFIVN YQFSLYVSKEKISSLTSLKSSYSRVISVLILGITSLELLIFSPTIVITIHFMITLILTCVFLHKTKL
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44130; Mature: 44130
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLKINILSYYLATILLVIAQSLPHAILTPLLLNKGLSLSQIMIIQATYSLCVLISEY CCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC PSGVLADLMNRKILFIVSKLILVCSFFCILWLDSFISMILAWGIYGLSNALESGTIDATL CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH ITNIKEQKEDLSTFIAKSHQISFIGLIVGSCLGSFLYLKYGVSMYYISVLLTLLCISVII HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFKDDSSHKLEKNKQFQILKQHVKESFRELRDKPLLKNLILLSLILQIFFQSHFQLWQA HHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH YLLNKQITENYLFIFYISFQVIGILIHLCNAKLYNRYITTIMIFLIGLASVLLLSTNILL HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSSYMLSVALFTYIDFIVNYQFSLYVSKEKISSLTSLKSSYSRVISVLILGITSLELLI HHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSPTIVITIHFMITLILTCVFLHKTKL CCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKTLKINILSYYLATILLVIAQSLPHAILTPLLLNKGLSLSQIMIIQATYSLCVLISEY CCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC PSGVLADLMNRKILFIVSKLILVCSFFCILWLDSFISMILAWGIYGLSNALESGTIDATL CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH ITNIKEQKEDLSTFIAKSHQISFIGLIVGSCLGSFLYLKYGVSMYYISVLLTLLCISVII HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFKDDSSHKLEKNKQFQILKQHVKESFRELRDKPLLKNLILLSLILQIFFQSHFQLWQA HHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH YLLNKQITENYLFIFYISFQVIGILIHLCNAKLYNRYITTIMIFLIGLASVLLLSTNILL HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSSYMLSVALFTYIDFIVNYQFSLYVSKEKISSLTSLKSSYSRVISVLILGITSLELLI HHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSPTIVITIHFMITLILTCVFLHKTKL CCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA