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The map label for this gene is ISHa1152 tnpA

Identifier: 109947328

GI number: 109947328

Start: 663794

End: 664198

Strand: Reverse

Name: ISHa1152 tnpA

Synonym: Hac_0762

Alternate gene names: NA

Gene position: 664198-663794 (Counterclockwise)

Preceding gene: 109947329

Following gene: 109947327

Centisome position: 42.74

GC content: 38.52

Gene sequence:

>405_bases
GTGTGGTGTCCTAAATACAGACGCAAGGTGTTAGTGGGAGCTGTGGGAATAAGATTGAAAGAAATTATTCAAGAAGTGGC
TAAAGGATTAAGAGTGGGAATCATAGAAATGCAAACAGATAAAGACCATATCCACATTTTAGCGGGCATTGATCCAAGTT
TTGGAGTGATGGAATTCATTAAAACCGCTAAAGGTCGCAGCAGTAAGATATTAAGACAAGAATCCACCCACTTAAGAACA
AAACTATCCGCTTTATGGACTCATTCTTGTTTCACAACAGCGGGAGGTGTGCCTTTGAATGGTGTTAAACAATACATTGA
AAACCAACAAAATAGCAACCGCCCTAAGCAAAAAGAAAAATGGAAAAACCATGTTGATAGCCTACAAACAAAAGCTCTAC
ACTAA

Upstream 100 bases:

>100_bases
ATATTGTATTCCTTATTTTTTATGGATAATATTAAGTATGAGTAACGCTGTTTGATACAAAAGCAATCATAATGTTGTTT
ATTCTTGCAAATACCATATC

Downstream 100 bases:

>100_bases
CAATAAGAATAGGCGTATAGACACACTATTAAGGCGTTATGGCGTGCTGTATAATCATTGCATTGCACAAACGCTATTAT
AGACTTTTTAAAAAGCATTT

Product: ISHa1152 transposase A

Products: NA

Alternate protein names: Transposase IS; Transposase-Related Protein; Transposase And Inactivated Derivatives; Transposase OrfA For Insertion Sequence Element; Transposase OrfA; Transposase Related Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISCpe2 Transposase OrfA; Transposase Repeat Family IS; ISSoc6 OrfA Transposase

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MWCPKYRRKVLVGAVGIRLKEIIQEVAKGLRVGIIEMQTDKDHIHILAGIDPSFGVMEFIKTAKGRSSKILRQESTHLRT
KLSALWTHSCFTTAGGVPLNGVKQYIENQQNSNRPKQKEKWKNHVDSLQTKALH

Sequences:

>Translated_134_residues
MWCPKYRRKVLVGAVGIRLKEIIQEVAKGLRVGIIEMQTDKDHIHILAGIDPSFGVMEFIKTAKGRSSKILRQESTHLRT
KLSALWTHSCFTTAGGVPLNGVKQYIENQQNSNRPKQKEKWKNHVDSLQTKALH
>Mature_134_residues
MWCPKYRRKVLVGAVGIRLKEIIQEVAKGLRVGIIEMQTDKDHIHILAGIDPSFGVMEFIKTAKGRSSKILRQESTHLRT
KLSALWTHSCFTTAGGVPLNGVKQYIENQQNSNRPKQKEKWKNHVDSLQTKALH

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15243; Mature: 15243

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWCPKYRRKVLVGAVGIRLKEIIQEVAKGLRVGIIEMQTDKDHIHILAGIDPSFGVMEFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHH
KTAKGRSSKILRQESTHLRTKLSALWTHSCFTTAGGVPLNGVKQYIENQQNSNRPKQKEK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHH
WKNHVDSLQTKALH
HHHHHHHHHHHCCC
>Mature Secondary Structure
MWCPKYRRKVLVGAVGIRLKEIIQEVAKGLRVGIIEMQTDKDHIHILAGIDPSFGVMEFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHH
KTAKGRSSKILRQESTHLRTKLSALWTHSCFTTAGGVPLNGVKQYIENQQNSNRPKQKEK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHH
WKNHVDSLQTKALH
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA