Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947028

Identifier: 109947028

GI number: 109947028

Start: 367325

End: 369679

Strand: Direct

Name: 109947028

Synonym: Hac_0424

Alternate gene names: NA

Gene position: 367325-369679 (Clockwise)

Preceding gene: 109947024

Following gene: 109947029

Centisome position: 23.64

GC content: 41.66

Gene sequence:

>2355_bases
GTGTGGGGGAATAAAGATTACGGGTTAGAACACATCTTAAAACGCCGAGAAGAGCAAGCCATAGGTAAAGGGCTAAACGA
AGCAGAAGCTAAAGAATACGCTTTAAGCATCGTTAAATCCATCCCTGAAGTGTTAGAGAAAGGCGCTAAAGGAACGGATC
ATTTAGGGCGTGTGTTTGTGGATTATGGCAATAAGAGAGTAGGTTTAAATAATGAATGGAAAAATGAAAAATTAGAGAAC
CATTGGGTAGTAAGCAGTTATAAATTGTATGATACAGAGAAGCAAGCGTTACGGTCTACTCCGCAAGCAATTACAAAAGA
AAAGGCATTTAATTCTTTAAACTCTATTGAACCTGATCCTACTCAAAAACCATTAACCAGTCAAGAGGATTTATTAAAAA
AACCAGAAAATTTAAACGAAACCCCGCAAGTTACGCAAAATTTATCCCCCCTAGAACAGGCTCAAGCCGAAAAACGAGCG
AAATTAGAACAAGAAGCTTTAGCGAGCGAACAAGACTTTTTAAGAGCTAAAGAGCGAGAAACCAAAAGAAAAGAAGCCTT
GAAACGCAAATTAGAACACGAGCGAGGCAATGCAGGGAATATTGAAAGCCAGACTCATATTGAAGTGGGAGAAGATATCC
CTGCAAAGATTTTAGCCGAGCACCCCAAAAGCCGCGTGAGGCTCAATGAAAAAGAGATTTACGATCTCAACTACGCGATC
GTGAATGCAAAGGATCTCAAGCCCAGTTTCACCACAGGAGGCACGCAGAAGCGCACGGACATGAACGAAGAACAGATTGA
AAGCATCGCCAAGAATTTTGACCCTAAAAAGATATTTGGCAGCGGAGGGTTTGAAGACTTGCCCATCATCTTGCATGACG
GGCAGGTGATTGCAGGCAACCACAGGATCTTTGGCATGCTCCATTTCACGCCTAAAAGCCGATATATCTATGATAAAGCG
ATCAAAGAATATTACCATATTGACCTAAAGCCTGACGAGCTATTAGTGCGAGTCCCGCATGAGCGCTTGAACAACACCGA
GATCAACAATTTAGCCGCAGCCAGCAACCAAGGGCGCTTTAACAGCGAAAGCGATCACGCGTTGGCGGTTTTAAGCCGTT
ATGAAGCGCCATTGAAAGCCTTAGAAAAAAAGCTTAACGCGGACAGCGTCTATTCCTTGAAACGCATCGTGGCTAAAAAT
TTGAACTTTGATAAAGCCTCCCACCCTAATGTAACTGACAGCAATTTAGCGCTTTTAATGTATAACATGCCAAGGACTAA
AACCCAAGGCATAGAATTATTGAACCGTTGGCACAAAGAATTTTCTAACGACATTAAAAGCTATGAAAAGGTGAAAAAAA
TGTTTACGGATAACGCCGGGAGCTTTCATAACCTCATTTTTGACATGAATTTCCCTCAGGTGAGTTTGAACGCTTATTTG
AGCGATATCATGGATCGCGTGTTTGCGAACTTGAAGAAATACCCGACCACGAGCGAGGGCTTGAAGGATTTGAGCGAGAA
ATTTTACCAGACACGCTCTTTAGAAATGTTTGAAAAAAGCGATCAACGAACGAGCGATATCAGCGAGATTTTAGGAAGCG
CTTTTGCCAGGTTTGCGAGGTTAGATGATCCGAGTAAGGCGTTGTTTGAAGCCTTAAAGAGCGATAACATCAAAAAAGGC
TTGAAAGAATTCAGGATCGCTGATGAAACCAAGGATATCTTTGATCCTAACAGCAAGGAATTCAAGGACATTGACATTTA
CGATTTCACGAATTACCTTTTAATGGCCAACAGAGAAGCGAACGAAAACAACCCCATCATCAACCGCTTGATTAAAGCCG
TGAAAGGCATGCAAAAAGAGCATGACGGCTTGAAAGTTGCCAAAGAGGGAACGATAGAGGAAGTTAAAAAGCGATCGTTT
GAAGTCATAGAGGATAAAGAAGCGTTTTTGAAGGGCTTGAAGGGGATCAAACCCACACCCTTACCCAAAGAGATTGATAC
CGATAGCTTTTTGAACGCTTTGAACGGGGTTAAGAACAAAGAAAACTTCATCAAACACTTAGAAAGCAAGCCTGACAGCA
AGCACCGATTAGCGCTTTTGCACTTAGTGGAACCCACCTTGAAAGAACCCGATATAACGCTCATTTTCAAAGATCAAGGC
AAGGAAGTTAAGAAAGAACACATTAAGGCGTTTCAAAGCGATCCTAAAACGATTTATTATTTTTTGGTCACGCAAGATAA
AGACAGCAAGCTACTAACAGGATTGAAAGTTAAGCCAATTTATATTAAAGCAGAGATTGACAAGGCGGACATTATCCACT
CTTTCATTCCGCAGGGTAGAACGCTTAAAGAATAA

Upstream 100 bases:

>100_bases
TAAACGAATAGCTAAAGAAGCGCTAGAGAAGCTCTTGCAAGAAAAGAACGGGCAAGTTGCAGGCGCTTTTTATAGGGACG
ATTTAGGAGGGATTGATTTC

Downstream 100 bases:

>100_bases
GCCGACGGAGTGGGCTACCATTGAAAGGATAGCGCAAAAAACTTTAAAGAGTCAAGGAGGAAGAAATGAATATCCCTAAC
TTACCTGACAGCGCGTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MWGNKDYGLEHILKRREEQAIGKGLNEAEAKEYALSIVKSIPEVLEKGAKGTDHLGRVFVDYGNKRVGLNNEWKNEKLEN
HWVVSSYKLYDTEKQALRSTPQAITKEKAFNSLNSIEPDPTQKPLTSQEDLLKKPENLNETPQVTQNLSPLEQAQAEKRA
KLEQEALASEQDFLRAKERETKRKEALKRKLEHERGNAGNIESQTHIEVGEDIPAKILAEHPKSRVRLNEKEIYDLNYAI
VNAKDLKPSFTTGGTQKRTDMNEEQIESIAKNFDPKKIFGSGGFEDLPIILHDGQVIAGNHRIFGMLHFTPKSRYIYDKA
IKEYYHIDLKPDELLVRVPHERLNNTEINNLAAASNQGRFNSESDHALAVLSRYEAPLKALEKKLNADSVYSLKRIVAKN
LNFDKASHPNVTDSNLALLMYNMPRTKTQGIELLNRWHKEFSNDIKSYEKVKKMFTDNAGSFHNLIFDMNFPQVSLNAYL
SDIMDRVFANLKKYPTTSEGLKDLSEKFYQTRSLEMFEKSDQRTSDISEILGSAFARFARLDDPSKALFEALKSDNIKKG
LKEFRIADETKDIFDPNSKEFKDIDIYDFTNYLLMANREANENNPIINRLIKAVKGMQKEHDGLKVAKEGTIEEVKKRSF
EVIEDKEAFLKGLKGIKPTPLPKEIDTDSFLNALNGVKNKENFIKHLESKPDSKHRLALLHLVEPTLKEPDITLIFKDQG
KEVKKEHIKAFQSDPKTIYYFLVTQDKDSKLLTGLKVKPIYIKAEIDKADIIHSFIPQGRTLKE

Sequences:

>Translated_784_residues
MWGNKDYGLEHILKRREEQAIGKGLNEAEAKEYALSIVKSIPEVLEKGAKGTDHLGRVFVDYGNKRVGLNNEWKNEKLEN
HWVVSSYKLYDTEKQALRSTPQAITKEKAFNSLNSIEPDPTQKPLTSQEDLLKKPENLNETPQVTQNLSPLEQAQAEKRA
KLEQEALASEQDFLRAKERETKRKEALKRKLEHERGNAGNIESQTHIEVGEDIPAKILAEHPKSRVRLNEKEIYDLNYAI
VNAKDLKPSFTTGGTQKRTDMNEEQIESIAKNFDPKKIFGSGGFEDLPIILHDGQVIAGNHRIFGMLHFTPKSRYIYDKA
IKEYYHIDLKPDELLVRVPHERLNNTEINNLAAASNQGRFNSESDHALAVLSRYEAPLKALEKKLNADSVYSLKRIVAKN
LNFDKASHPNVTDSNLALLMYNMPRTKTQGIELLNRWHKEFSNDIKSYEKVKKMFTDNAGSFHNLIFDMNFPQVSLNAYL
SDIMDRVFANLKKYPTTSEGLKDLSEKFYQTRSLEMFEKSDQRTSDISEILGSAFARFARLDDPSKALFEALKSDNIKKG
LKEFRIADETKDIFDPNSKEFKDIDIYDFTNYLLMANREANENNPIINRLIKAVKGMQKEHDGLKVAKEGTIEEVKKRSF
EVIEDKEAFLKGLKGIKPTPLPKEIDTDSFLNALNGVKNKENFIKHLESKPDSKHRLALLHLVEPTLKEPDITLIFKDQG
KEVKKEHIKAFQSDPKTIYYFLVTQDKDSKLLTGLKVKPIYIKAEIDKADIIHSFIPQGRTLKE
>Mature_784_residues
MWGNKDYGLEHILKRREEQAIGKGLNEAEAKEYALSIVKSIPEVLEKGAKGTDHLGRVFVDYGNKRVGLNNEWKNEKLEN
HWVVSSYKLYDTEKQALRSTPQAITKEKAFNSLNSIEPDPTQKPLTSQEDLLKKPENLNETPQVTQNLSPLEQAQAEKRA
KLEQEALASEQDFLRAKERETKRKEALKRKLEHERGNAGNIESQTHIEVGEDIPAKILAEHPKSRVRLNEKEIYDLNYAI
VNAKDLKPSFTTGGTQKRTDMNEEQIESIAKNFDPKKIFGSGGFEDLPIILHDGQVIAGNHRIFGMLHFTPKSRYIYDKA
IKEYYHIDLKPDELLVRVPHERLNNTEINNLAAASNQGRFNSESDHALAVLSRYEAPLKALEKKLNADSVYSLKRIVAKN
LNFDKASHPNVTDSNLALLMYNMPRTKTQGIELLNRWHKEFSNDIKSYEKVKKMFTDNAGSFHNLIFDMNFPQVSLNAYL
SDIMDRVFANLKKYPTTSEGLKDLSEKFYQTRSLEMFEKSDQRTSDISEILGSAFARFARLDDPSKALFEALKSDNIKKG
LKEFRIADETKDIFDPNSKEFKDIDIYDFTNYLLMANREANENNPIINRLIKAVKGMQKEHDGLKVAKEGTIEEVKKRSF
EVIEDKEAFLKGLKGIKPTPLPKEIDTDSFLNALNGVKNKENFIKHLESKPDSKHRLALLHLVEPTLKEPDITLIFKDQG
KEVKKEHIKAFQSDPKTIYYFLVTQDKDSKLLTGLKVKPIYIKAEIDKADIIHSFIPQGRTLKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89830; Mature: 89830

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGNKDYGLEHILKRREEQAIGKGLNEAEAKEYALSIVKSIPEVLEKGAKGTDHLGRVFV
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHE
DYGNKRVGLNNEWKNEKLENHWVVSSYKLYDTEKQALRSTPQAITKEKAFNSLNSIEPDP
ECCCEECCCCCCCCCCHHCCCEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCC
TQKPLTSQEDLLKKPENLNETPQVTQNLSPLEQAQAEKRAKLEQEALASEQDFLRAKERE
CCCCCCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKRKEALKRKLEHERGNAGNIESQTHIEVGEDIPAKILAEHPKSRVRLNEKEIYDLNYAI
HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHCCHHHCCCCHHHEEECCEEE
VNAKDLKPSFTTGGTQKRTDMNEEQIESIAKNFDPKKIFGSGGFEDLPIILHDGQVIAGN
EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCEEEECC
HRIFGMLHFTPKSRYIYDKAIKEYYHIDLKPDELLVRVPHERLNNTEINNLAAASNQGRF
CEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHEEECCHHHCCCCCHHHHHHCCCCCCC
NSESDHALAVLSRYEAPLKALEKKLNADSVYSLKRIVAKNLNFDKASHPNVTDSNLALLM
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
YNMPRTKTQGIELLNRWHKEFSNDIKSYEKVKKMFTDNAGSFHNLIFDMNFPQVSLNAYL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHH
SDIMDRVFANLKKYPTTSEGLKDLSEKFYQTRSLEMFEKSDQRTSDISEILGSAFARFAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LDDPSKALFEALKSDNIKKGLKEFRIADETKDIFDPNSKEFKDIDIYDFTNYLLMANREA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEECCCC
NENNPIINRLIKAVKGMQKEHDGLKVAKEGTIEEVKKRSFEVIEDKEAFLKGLKGIKPTP
CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPKEIDTDSFLNALNGVKNKENFIKHLESKPDSKHRLALLHLVEPTLKEPDITLIFKDQG
CCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
KEVKKEHIKAFQSDPKTIYYFLVTQDKDSKLLTGLKVKPIYIKAEIDKADIIHSFIPQGR
HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCEEEEEEEEEECCHHHHHHHHCCCCC
TLKE
CCCC
>Mature Secondary Structure
MWGNKDYGLEHILKRREEQAIGKGLNEAEAKEYALSIVKSIPEVLEKGAKGTDHLGRVFV
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHE
DYGNKRVGLNNEWKNEKLENHWVVSSYKLYDTEKQALRSTPQAITKEKAFNSLNSIEPDP
ECCCEECCCCCCCCCCHHCCCEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCC
TQKPLTSQEDLLKKPENLNETPQVTQNLSPLEQAQAEKRAKLEQEALASEQDFLRAKERE
CCCCCCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKRKEALKRKLEHERGNAGNIESQTHIEVGEDIPAKILAEHPKSRVRLNEKEIYDLNYAI
HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHCCHHHCCCCHHHEEECCEEE
VNAKDLKPSFTTGGTQKRTDMNEEQIESIAKNFDPKKIFGSGGFEDLPIILHDGQVIAGN
EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCEEEECC
HRIFGMLHFTPKSRYIYDKAIKEYYHIDLKPDELLVRVPHERLNNTEINNLAAASNQGRF
CEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHEEECCHHHCCCCCHHHHHHCCCCCCC
NSESDHALAVLSRYEAPLKALEKKLNADSVYSLKRIVAKNLNFDKASHPNVTDSNLALLM
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
YNMPRTKTQGIELLNRWHKEFSNDIKSYEKVKKMFTDNAGSFHNLIFDMNFPQVSLNAYL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCHHHHHHH
SDIMDRVFANLKKYPTTSEGLKDLSEKFYQTRSLEMFEKSDQRTSDISEILGSAFARFAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LDDPSKALFEALKSDNIKKGLKEFRIADETKDIFDPNSKEFKDIDIYDFTNYLLMANREA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEECCCC
NENNPIINRLIKAVKGMQKEHDGLKVAKEGTIEEVKKRSFEVIEDKEAFLKGLKGIKPTP
CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPKEIDTDSFLNALNGVKNKENFIKHLESKPDSKHRLALLHLVEPTLKEPDITLIFKDQG
CCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCC
KEVKKEHIKAFQSDPKTIYYFLVTQDKDSKLLTGLKVKPIYIKAEIDKADIIHSFIPQGR
HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCEEEEEEEEEECCHHHHHHHHCCCCC
TLKE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA