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The map label for this gene is hofH

Identifier: 109947016

GI number: 109947016

Start: 355848

End: 357170

Strand: Reverse

Name: hofH

Synonym: Hac_0410

Alternate gene names: NA

Gene position: 357170-355848 (Counterclockwise)

Preceding gene: 109947021

Following gene: 109947014

Centisome position: 22.98

GC content: 43.16

Gene sequence:

>1323_bases
ATGAAAAAATCATGGCAGGCGTTTCTATTCTGTGGAGCGGTTTTTAACGCTTCTTTGCAAGGTTTTGAAGCCAAACTCAA
TGGCTTTGTGGATCAATCTAGCACGATTGGTTTCAACCAACACAAGATTAATAAAGCAAGAGGCATCTATCCTATGCAAC
AATTTGCAACGATTGCGGGTTATTTAGGGCTTGGTTTTAACCTACTACCTAAAAAAGTGTCCGATCATGCCTTAAAAGGC
AAAATAGGAGGCATGGTAGGGTCCATTTTCTATGACGGCACGAAGAAGTTTGAAGACGGCTCTGTGGCTTATAATCTCTT
TGGTTATTATGATGGGTTTATGGGGGGTTATACAAATATCTTACAAACCGATGATTTAGCGACAGCAAACAGAAAATACA
ACGAAAATGTCCGCAACTATGTCTTTAGCGATGCGTATTTAGAATACAGCTATAAAGATTATTTTGAATTTAAAGGTGGG
CGCTATCTCTCCACCATGCCTTTTAAGAGCGGTCAAACGCAAGGCTTTCAGGTCTCTGGGCAATACAAAAAAGCACGCTT
GACTTGGTTTAGCTCTTTTGGGAGGGCGTTCGCTTATGGCTCGTTTATGATGGATTGGTTTGCCGCTAGGACCACTTATA
GCGGTGGCTTTACCAAAAACGATAAAGGGGGTTATGACAAGCATGGGGAGAAGGTGCTTTATGGCACGCATGCGGTGCAG
CTCACTTATAATCCACAGCGTTTTGTTGTAGAGGCTTTTTATTACCTTTCGCCTCAAATTTTCAACGCTCCAGGCGTTAA
GGTTGGTTGGAACTCTAACCCTAACTTTAGCGGCACAGGCTTTCGCTCGGATACGACTATCACAGGGTTTTTCCCTATCT
ACTACCCTTGGATGATCGTTAAGGCTAATGGGAGTCCGGTGTATAGATACGACACCCCAGCCACTCGATATGGGCAAAAT
CTCATGATCCGCCAACGCTTCGATATAAACAATTACAATGTATCAATCGCCTTTTATCAAGTCTTTCAAAACGCTAATGG
TTGGATAGGCAACATGGGGAATCCAAGCGGTGTGATGACTGGGAATAACAGCGTCTATGCGGGTTTTTCAGGCACGGCTC
TTAAAAGAAACGCTTCTACGATTTTAGTGTCTTGTGGGGGTGCTCATTTTGTGAAAAAATTCACATGGAAATTCGCTACG
CAATATTCCACTTCTGTGGTTTCTTGGGAGGCGAGAGCGATGCTCTCTTTAGGGTATAAATTCTCTGAATACTTGAGCGG
TGGCATTGATCTTGTGTATTATGGCATACACACCTGTGCCTAA

Upstream 100 bases:

>100_bases
TACATACTACAATACTCTAAATTTAAGAATAATAAAAACCAAAGAATAGATTTATCATTAAGGGCGTTTGTGTTTATCAA
TCTCATTTTAGGAGGTGCTC

Downstream 100 bases:

>100_bases
AGACTTTCCGGCTCTTTATTCTGATAGGAGTGCGTTATACACGGCCTTGGTAGCGTCTTTTTAGATGCTACGAATAACAA
AATAATAGCATGCGTCTTTC

Product: hof family outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKKSWQAFLFCGAVFNASLQGFEAKLNGFVDQSSTIGFNQHKINKARGIYPMQQFATIAGYLGLGFNLLPKKVSDHALKG
KIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNILQTDDLATANRKYNENVRNYVFSDAYLEYSYKDYFEFKGG
RYLSTMPFKSGQTQGFQVSGQYKKARLTWFSSFGRAFAYGSFMMDWFAARTTYSGGFTKNDKGGYDKHGEKVLYGTHAVQ
LTYNPQRFVVEAFYYLSPQIFNAPGVKVGWNSNPNFSGTGFRSDTTITGFFPIYYPWMIVKANGSPVYRYDTPATRYGQN
LMIRQRFDINNYNVSIAFYQVFQNANGWIGNMGNPSGVMTGNNSVYAGFSGTALKRNASTILVSCGGAHFVKKFTWKFAT
QYSTSVVSWEARAMLSLGYKFSEYLSGGIDLVYYGIHTCA

Sequences:

>Translated_440_residues
MKKSWQAFLFCGAVFNASLQGFEAKLNGFVDQSSTIGFNQHKINKARGIYPMQQFATIAGYLGLGFNLLPKKVSDHALKG
KIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNILQTDDLATANRKYNENVRNYVFSDAYLEYSYKDYFEFKGG
RYLSTMPFKSGQTQGFQVSGQYKKARLTWFSSFGRAFAYGSFMMDWFAARTTYSGGFTKNDKGGYDKHGEKVLYGTHAVQ
LTYNPQRFVVEAFYYLSPQIFNAPGVKVGWNSNPNFSGTGFRSDTTITGFFPIYYPWMIVKANGSPVYRYDTPATRYGQN
LMIRQRFDINNYNVSIAFYQVFQNANGWIGNMGNPSGVMTGNNSVYAGFSGTALKRNASTILVSCGGAHFVKKFTWKFAT
QYSTSVVSWEARAMLSLGYKFSEYLSGGIDLVYYGIHTCA
>Mature_440_residues
MKKSWQAFLFCGAVFNASLQGFEAKLNGFVDQSSTIGFNQHKINKARGIYPMQQFATIAGYLGLGFNLLPKKVSDHALKG
KIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNILQTDDLATANRKYNENVRNYVFSDAYLEYSYKDYFEFKGG
RYLSTMPFKSGQTQGFQVSGQYKKARLTWFSSFGRAFAYGSFMMDWFAARTTYSGGFTKNDKGGYDKHGEKVLYGTHAVQ
LTYNPQRFVVEAFYYLSPQIFNAPGVKVGWNSNPNFSGTGFRSDTTITGFFPIYYPWMIVKANGSPVYRYDTPATRYGQN
LMIRQRFDINNYNVSIAFYQVFQNANGWIGNMGNPSGVMTGNNSVYAGFSGTALKRNASTILVSCGGAHFVKKFTWKFAT
QYSTSVVSWEARAMLSLGYKFSEYLSGGIDLVYYGIHTCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49381; Mature: 49381

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSWQAFLFCGAVFNASLQGFEAKLNGFVDQSSTIGFNQHKINKARGIYPMQQFATIAG
CCCCCEEEEEEHHHHHCHHCCHHHHHCCCCCCCCCCCCCHHHCHHHCCCCCHHHHHHHHH
YLGLGFNLLPKKVSDHALKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNI
HHHCCCCCCCCHHCCHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEHHCCCCCCCHHH
LQTDDLATANRKYNENVRNYVFSDAYLEYSYKDYFEFKGGRYLSTMPFKSGQTQGFQVSG
EECCCCCCCCCHHHHHHHHHEECCCEEEECCHHHEEECCCEEEEECCCCCCCCCCEEEEC
QYKKARLTWFSSFGRAFAYGSFMMDWFAARTTYSGGFTKNDKGGYDKHGEKVLYGTHAVQ
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
LTYNPQRFVVEAFYYLSPQIFNAPGVKVGWNSNPNFSGTGFRSDTTITGFFPIYYPWMIV
EEECCHHHEEHHHHHHCCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEEEE
KANGSPVYRYDTPATRYGQNLMIRQRFDINNYNVSIAFYQVFQNANGWIGNMGNPSGVMT
EECCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEEEEEHHCCCCCCCCCCCCCEEEE
GNNSVYAGFSGTALKRNASTILVSCGGAHFVKKFTWKFATQYSTSVVSWEARAMLSLGYK
CCCCEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCH
FSEYLSGGIDLVYYGIHTCA
HHHHHCCCCEEEEEEEECCC
>Mature Secondary Structure
MKKSWQAFLFCGAVFNASLQGFEAKLNGFVDQSSTIGFNQHKINKARGIYPMQQFATIAG
CCCCCEEEEEEHHHHHCHHCCHHHHHCCCCCCCCCCCCCHHHCHHHCCCCCHHHHHHHHH
YLGLGFNLLPKKVSDHALKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNI
HHHCCCCCCCCHHCCHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEHHCCCCCCCHHH
LQTDDLATANRKYNENVRNYVFSDAYLEYSYKDYFEFKGGRYLSTMPFKSGQTQGFQVSG
EECCCCCCCCCHHHHHHHHHEECCCEEEECCHHHEEECCCEEEEECCCCCCCCCCEEEEC
QYKKARLTWFSSFGRAFAYGSFMMDWFAARTTYSGGFTKNDKGGYDKHGEKVLYGTHAVQ
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
LTYNPQRFVVEAFYYLSPQIFNAPGVKVGWNSNPNFSGTGFRSDTTITGFFPIYYPWMIV
EEECCHHHEEHHHHHHCCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEEEE
KANGSPVYRYDTPATRYGQNLMIRQRFDINNYNVSIAFYQVFQNANGWIGNMGNPSGVMT
EECCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEEEEEEHHCCCCCCCCCCCCCEEEE
GNNSVYAGFSGTALKRNASTILVSCGGAHFVKKFTWKFATQYSTSVVSWEARAMLSLGYK
CCCCEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCH
FSEYLSGGIDLVYYGIHTCA
HHHHHCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA