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The map label for this gene is glnP [C]

Identifier: 109947014

GI number: 109947014

Start: 352390

End: 353022

Strand: Reverse

Name: glnP [C]

Synonym: Hac_0408

Alternate gene names: 109947014

Gene position: 353022-352390 (Counterclockwise)

Preceding gene: 109947016

Following gene: 109947013

Centisome position: 22.72

GC content: 37.28

Gene sequence:

>633_bases
ATGTATCGCTCCATCCCTGCGTTTCTTAAGGGATTAGAACTCACGCTTTATGTTTCTTTCTTTGGGATTTTACTCTCGCT
TATCGTGGGGTTTTTGTGTGCGGTTATTTTGTATTTTAAAATGCGCTTTATCTCTCCTATAGTTTATATTTATGGTGAAA
TCGCTAGGAACACGCCCCTACTCATCCAGCTTTTCTTTTTGTATTATGGGTTGAATGCAATCGGTTTGAGCGCTTTAGAA
TGTGCGATTTTAGCGTTAGGGTTTTTAGGTGGGGGGTATATGAGTCAAAGTTTTTTGCTTGGGTTTAAGAGCTTGGCTTC
CATTCAAAGAGAAAGCGCTTTGAGTTTAGGGTTTAGCCCTTTGAAGCTTTTGTATTACATTGTTTTACCTCAAAGCTTGA
GCGTTTCTATGCCTTCCATAGGGGCGAATGTGATTTTTTTACTCAAAGAAACTTCTGTGGTAGGCGCGATAGCCTTAACT
GATATTATGTTTGTGGCAAAAGATTTTATTGGCATTTATTATAAAACGACTGAAAACCTTTTAATGTTAAGCATCACTTA
TTTGATCGTTTTGCTCCCTTTGAGCGTTTTATTTGTGATCTTAGAGCGTTTTTTTAAAAAGAAAGTGGCTTAA

Upstream 100 bases:

>100_bases
GTTTATCCAAACGCCTTTTAGTAACAATTAGAACATGGGCTATTTTTAAACACTTTAGGGCATTCATTAAGGCAAAATAA
TGGCATTAGACTGGGATTTT

Downstream 100 bases:

>100_bases
AATGGGGGTTTTATTAGAGTTAGATAACCTTAAGCGTTTGTTAGAGGGGTTTGAAATCACTCTTTTAATCGCTCTTAGCT
CTGCAATTGTTTCAATCATT

Product: polar amino acid transport system permease

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MYRSIPAFLKGLELTLYVSFFGILLSLIVGFLCAVILYFKMRFISPIVYIYGEIARNTPLLIQLFFLYYGLNAIGLSALE
CAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFSPLKLLYYIVLPQSLSVSMPSIGANVIFLLKETSVVGAIALT
DIMFVAKDFIGIYYKTTENLLMLSITYLIVLLPLSVLFVILERFFKKKVA

Sequences:

>Translated_210_residues
MYRSIPAFLKGLELTLYVSFFGILLSLIVGFLCAVILYFKMRFISPIVYIYGEIARNTPLLIQLFFLYYGLNAIGLSALE
CAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFSPLKLLYYIVLPQSLSVSMPSIGANVIFLLKETSVVGAIALT
DIMFVAKDFIGIYYKTTENLLMLSITYLIVLLPLSVLFVILERFFKKKVA
>Mature_210_residues
MYRSIPAFLKGLELTLYVSFFGILLSLIVGFLCAVILYFKMRFISPIVYIYGEIARNTPLLIQLFFLYYGLNAIGLSALE
CAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFSPLKLLYYIVLPQSLSVSMPSIGANVIFLLKETSVVGAIALT
DIMFVAKDFIGIYYKTTENLLMLSITYLIVLLPLSVLFVILERFFKKKVA

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=210, Percent_Identity=25.2380952380952, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788226, Length=169, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=25.1184834123223, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=26.1467889908257, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788646, Length=168, Percent_Identity=25.5952380952381, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014341 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23358; Mature: 23358

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRSIPAFLKGLELTLYVSFFGILLSLIVGFLCAVILYFKMRFISPIVYIYGEIARNTPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LIQLFFLYYGLNAIGLSALECAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LKLLYYIVLPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKDFIGIYYKTTENL
HHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLSITYLIVLLPLSVLFVILERFFKKKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYRSIPAFLKGLELTLYVSFFGILLSLIVGFLCAVILYFKMRFISPIVYIYGEIARNTPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LIQLFFLYYGLNAIGLSALECAILALGFLGGGYMSQSFLLGFKSLASIQRESALSLGFSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LKLLYYIVLPQSLSVSMPSIGANVIFLLKETSVVGAIALTDIMFVAKDFIGIYYKTTENL
HHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLSITYLIVLLPLSVLFVILERFFKKKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]