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The map label for this gene is ymdC [C]

Identifier: 109946983

GI number: 109946983

Start: 320408

End: 321916

Strand: Reverse

Name: ymdC [C]

Synonym: Hac_0375

Alternate gene names: 109946983

Gene position: 321916-320408 (Counterclockwise)

Preceding gene: 109946984

Following gene: 109946974

Centisome position: 20.72

GC content: 38.57

Gene sequence:

>1509_bases
TTGAAAGTCTTTTTAGTTCTTTTAAGCGTCTTTTTTTTTAGTGGGTGTTTTGGGTTAGTCTATGAGGCTCCCATTTCAAA
CCCCCCTATCTCTTATAACCCTTACACTACCACAATTGGAAGCTTATATGCCAAAAATCTAAAAGAGCACCCCAATAATA
GTGCAGCCATTCTTTTAGAAGATGGCTTTGACGCTTTATTGCATAGAGTGGGTCTTATTAGGATGAGTCAAAAAAGCATT
GATATGCAAACTTATATCTATAAAAACGATCTTTCCTCCCAACTGATCGCCAAAGAGCTTTTAAGTGCGGCTAATCGTGG
GGTAAAAGTACGCATCCTTTTAGACGATAACGGATTACATTCGGACTTTTCAGATATTATGCTTTTAAATTTCCACAAAA
ACATCGAAGTGAAAATTTTTAACCCTTACTATATCCGCAATAAAGGCTTGCGCTATTTTGAAATGCTCGCAGATTATGAA
CGCATTAAAAAACGCATGCACAACAAGCTTTTTATCGTGGATAACTTCGCTGTCATTATAGGGGGGCGCAATATCGGGGA
TAATTATTTTGATAACGATTTAGAGACGAATTTTTTAGATTTAGACGCTTTGTTTTTGGGGGGGGTCACTTCAAAATCTA
AAGAAAGTTTTGAAAATTATTGGAAATTCCACCGCTCTATTCCTATTTCATTATTAAGAACCCATAAAAGACTCAAAAAC
AACGCTAAAAAAATCGCCAAACTCCATGAAAAAATCCCTATCAGCACTGAAGATGCAAACGAATTTGAAAAAAAAGTCAA
TGATTTTATGGAGCGCTTTCAAAAATACCAATACCCTATTTATTATGGGAATGCAAATTTTTTAGCCGATTTGCCCACAA
AGATTGACACGCCCTCGTATTCGCCCATCAAAACCGCTTTTGAAAAAGCCCTTAAAGACGCCAAAAACTCCATTTTTATC
GCTTCATCGTATTTCATCCCAGGCAAAAAGATGATGAAAATCTTTAGGGATCAGGTTTCTAAAGGGGTGGAATTGAGCGT
TCTTACCAATTCCCTTTCATCAACGGACGCTATCGTCGTCTATGGGGCGTGGGAAAGGTATCGCAACCAGTTGGTGCGAA
TGGGAGCGAATGTCTATGAAATACGAAACGATTTTTTCAACCGCCAGATTAAAGGGCGTTTTAGCACCAAACATTCCTTG
CACAGCAAAACGATCGTTTTTGATGACGCTTTGACGCTTTTGGGGAGTTTTAATATTGATCCGCGCTCTGCATACATCAA
CACCGAAAGTGCAGTCTTATTTGACAACCCATCTTTTGCCAAAAGGGTGCGTTTGGTGCTTAAGGCTCAAGCCCAACAAT
CATGGCATTTGGTCTTGTATCGGCATAAAGTCATTTGGGAAACCGCAGAAGAAGGCATCTTAATCCACGAAAAAAATTCG
CCTGACACTTCCTTTTTTTTACGCTTGATTAAAGAATGGTCTAAAGTCCTTCCTGAAAAAGAACTCTAA

Upstream 100 bases:

>100_bases
CTTGCCCTAAAGAATTACCCTTACAAAGCAGTATCGCTACTTTGCGCAACCGAATGTTGAAAGTGGGTAAAAGCCGCTAA
TTTCTTTTAGTGGGTTGTTT

Downstream 100 bases:

>100_bases
ACCCTTTTAATGCCCTTTGTTTTGCGAAAAAGCGATATTATTCGTAACAGTAGCCAACAACGCTGAACACACAAATACTA
AATGGATCACGACTTGCCAA

Product: phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKVFLVLLSVFFFSGCFGLVYEAPISNPPISYNPYTTTIGSLYAKNLKEHPNNSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQLIAKELLSAANRGVKVRILLDDNGLHSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLETNFLDLDALFLGGVTSKSKESFENYWKFHRSIPISLLRTHKRLKN
NAKKIAKLHEKIPISTEDANEFEKKVNDFMERFQKYQYPIYYGNANFLADLPTKIDTPSYSPIKTAFEKALKDAKNSIFI
ASSYFIPGKKMMKIFRDQVSKGVELSVLTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HSKTIVFDDALTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLVLKAQAQQSWHLVLYRHKVIWETAEEGILIHEKNS
PDTSFFLRLIKEWSKVLPEKEL

Sequences:

>Translated_502_residues
MKVFLVLLSVFFFSGCFGLVYEAPISNPPISYNPYTTTIGSLYAKNLKEHPNNSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQLIAKELLSAANRGVKVRILLDDNGLHSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLETNFLDLDALFLGGVTSKSKESFENYWKFHRSIPISLLRTHKRLKN
NAKKIAKLHEKIPISTEDANEFEKKVNDFMERFQKYQYPIYYGNANFLADLPTKIDTPSYSPIKTAFEKALKDAKNSIFI
ASSYFIPGKKMMKIFRDQVSKGVELSVLTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HSKTIVFDDALTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLVLKAQAQQSWHLVLYRHKVIWETAEEGILIHEKNS
PDTSFFLRLIKEWSKVLPEKEL
>Mature_502_residues
MKVFLVLLSVFFFSGCFGLVYEAPISNPPISYNPYTTTIGSLYAKNLKEHPNNSAAILLEDGFDALLHRVGLIRMSQKSI
DMQTYIYKNDLSSQLIAKELLSAANRGVKVRILLDDNGLHSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE
RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLETNFLDLDALFLGGVTSKSKESFENYWKFHRSIPISLLRTHKRLKN
NAKKIAKLHEKIPISTEDANEFEKKVNDFMERFQKYQYPIYYGNANFLADLPTKIDTPSYSPIKTAFEKALKDAKNSIFI
ASSYFIPGKKMMKIFRDQVSKGVELSVLTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL
HSKTIVFDDALTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLVLKAQAQQSWHLVLYRHKVIWETAEEGILIHEKNS
PDTSFFLRLIKEWSKVLPEKEL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=470, Percent_Identity=31.9148936170213, Blast_Score=222, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58048; Mature: 58048

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFLVLLSVFFFSGCFGLVYEAPISNPPISYNPYTTTIGSLYAKNLKEHPNNSAAILLE
CHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQLIAKELLSAANRGVKVRILLDDNGLH
CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII
CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE
GGRNIGDNYFDNDLETNFLDLDALFLGGVTSKSKESFENYWKFHRSIPISLLRTHKRLKN
ECCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NAKKIAKLHEKIPISTEDANEFEKKVNDFMERFQKYQYPIYYGNANFLADLPTKIDTPSY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCC
SPIKTAFEKALKDAKNSIFIASSYFIPGKKMMKIFRDQVSKGVELSVLTNSLSSTDAIVV
CHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE
YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHSKTIVFDDALTLLGSFNID
EECHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCHHCCCCEEEEHHHHHHHHCCCCC
PRSAYINTESAVLFDNPSFAKRVRLVLKAQAQQSWHLVLYRHKVIWETAEEGILIHEKNS
CCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCEEEEECCC
PDTSFFLRLIKEWSKVLPEKEL
CCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKVFLVLLSVFFFSGCFGLVYEAPISNPPISYNPYTTTIGSLYAKNLKEHPNNSAAILLE
CHHHHHHHHHHHHHCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQLIAKELLSAANRGVKVRILLDDNGLH
CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII
CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE
GGRNIGDNYFDNDLETNFLDLDALFLGGVTSKSKESFENYWKFHRSIPISLLRTHKRLKN
ECCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
NAKKIAKLHEKIPISTEDANEFEKKVNDFMERFQKYQYPIYYGNANFLADLPTKIDTPSY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCC
SPIKTAFEKALKDAKNSIFIASSYFIPGKKMMKIFRDQVSKGVELSVLTNSLSSTDAIVV
CHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE
YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHSKTIVFDDALTLLGSFNID
EECHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCHHCCCCEEEEHHHHHHHHCCCCC
PRSAYINTESAVLFDNPSFAKRVRLVLKAQAQQSWHLVLYRHKVIWETAEEGILIHEKNS
CCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCEEEEECCC
PDTSFFLRLIKEWSKVLPEKEL
CCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]