Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109946964

Identifier: 109946964

GI number: 109946964

Start: 301015

End: 301743

Strand: Reverse

Name: 109946964

Synonym: Hac_0354

Alternate gene names: NA

Gene position: 301743-301015 (Counterclockwise)

Preceding gene: 109946972

Following gene: 109946963

Centisome position: 19.42

GC content: 31.69

Gene sequence:

>729_bases
ATGGTTTTGTCTTTATCTATCCTTAAAAAAAGCTTTGAAGATTTTTTAAGCACTAGAATGCTTTTAATCAATCTTGGTCC
CATTCTTTTGAGTTTGGCGTTTTTTGGAATTGTTTTTTACTACGATGGCGAGAGCATTGTGAGATATTGCCAAACCTTAT
TACCGCAATCTTTAAATGATTATGCCCATGCTCAAGGCTTTTTTTCTAGCGTGTTTGCATGGGTTTTTAAAGCGTTAGTG
TATTTTCTTATTTTTTGGATCGTGATTTTTTTGAGTTTAGTCATCAATATTTTTGTGTCTATTTTTTACACCCCTTTAGT
GGTTTCCTATTTGCACCAAAAATATTATTCCCATGTTGTTTTAGAAGAATTTGGCTCTATCCTTTTTTCTATTAAATATT
TTTTAAAATCGCTCCTTTTTATGCTTTTATTGATGGCGGTTTTAACGCCCTTTTATTCCATTCCTTTTATAGGGATTTTT
GGGGTCTTTTTTTCTACAATCGTGCATTTCCTCTTTTTTAAAAACACCATGAGTTTGGATATAGCTAGTGCAATTTTTAA
TCATCAAAGTTATCAAAACCTCCTCAAACAACACCGTTTGAAGCATTATCGTTTTTCATTTTTTTGCTATCTTTTTTCTC
TAATCCCTTTTTTTAATTTTTTTGCCACCTTGTTGCAAACCCTCATGCTCACGCACTACTTTTTTATCCTTAAAGAAAAA
GAATGCTAG

Upstream 100 bases:

>100_bases
AACTATTCTAGTGTTTTATAAGCTTGACTATGGGATAAGATTAAGGGACTTTGTGCTTAAATACCCCTTATAAAGGTGAG
TTTAAGAAGGGTTTTGGGTT

Downstream 100 bases:

>100_bases
ATTTTATTCAAGAGCTTAGCACCCCGCATGTAAGGGATTTTTTCTTATTATTTTTAAGGGTTAGTGGGGTGCTATCTTTT
TTCCCTTTTTTTGAAAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MVLSLSILKKSFEDFLSTRMLLINLGPILLSLAFFGIVFYYDGESIVRYCQTLLPQSLNDYAHAQGFFSSVFAWVFKALV
YFLIFWIVIFLSLVINIFVSIFYTPLVVSYLHQKYYSHVVLEEFGSILFSIKYFLKSLLFMLLLMAVLTPFYSIPFIGIF
GVFFSTIVHFLFFKNTMSLDIASAIFNHQSYQNLLKQHRLKHYRFSFFCYLFSLIPFFNFFATLLQTLMLTHYFFILKEK
EC

Sequences:

>Translated_242_residues
MVLSLSILKKSFEDFLSTRMLLINLGPILLSLAFFGIVFYYDGESIVRYCQTLLPQSLNDYAHAQGFFSSVFAWVFKALV
YFLIFWIVIFLSLVINIFVSIFYTPLVVSYLHQKYYSHVVLEEFGSILFSIKYFLKSLLFMLLLMAVLTPFYSIPFIGIF
GVFFSTIVHFLFFKNTMSLDIASAIFNHQSYQNLLKQHRLKHYRFSFFCYLFSLIPFFNFFATLLQTLMLTHYFFILKEK
EC
>Mature_242_residues
MVLSLSILKKSFEDFLSTRMLLINLGPILLSLAFFGIVFYYDGESIVRYCQTLLPQSLNDYAHAQGFFSSVFAWVFKALV
YFLIFWIVIFLSLVINIFVSIFYTPLVVSYLHQKYYSHVVLEEFGSILFSIKYFLKSLLFMLLLMAVLTPFYSIPFIGIF
GVFFSTIVHFLFFKNTMSLDIASAIFNHQSYQNLLKQHRLKHYRFSFFCYLFSLIPFFNFFATLLQTLMLTHYFFILKEK
EC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28595; Mature: 28595

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA