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The map label for this gene is prtC [C]

Identifier: 109946960

GI number: 109946960

Start: 297030

End: 298307

Strand: Reverse

Name: prtC [C]

Synonym: Hac_0350

Alternate gene names: 109946960

Gene position: 298307-297030 (Counterclockwise)

Preceding gene: 109946961

Following gene: 109946959

Centisome position: 19.2

GC content: 41.55

Gene sequence:

>1278_bases
GTGGCAGAATTACTCTCTCCAGCCGGTAATTTAAAAAAGCTTAAAATCGCTCTCAACTATGGGGCTGATGCGGTTTATGG
GGGAGTGAGCCATTTTTCTTTACGCAATCGTGCGAGCAAAGAATTCACTTTAGAGACCTTTAAAGAAGGCATTGATTACG
CGCATGCACTGAATAAAAAAGTCTATGCCACGATCAATGGTTTCCCTTTCAATTCACAGCTCAAACTTTTAGAAGAACAC
ATCTCTAAAATGGCAGAGCTAGAGCCGGACGCTTTTATTATCGCTACGCCTGGTGTCGTCAAACTCGCTTTAAAAATCGC
CCCACGCATCCCTATCCATTTATCCACGCAAGCGAATGTTTTAAATGTGTTAGATGCACAAGTGTTTTATGATTTAGGGG
TTAAACGCATTGTGTGTGCCAGGGAATTGAGCTTGAATGATGCGATTGAAATTAAAAAAACCTTACCTAATTTAGAATTA
GAAATTTTTGTGCATGGGAGCATGTGCTTTGCTTTTTCGGGGCGTTGCTTGATTTCGGCTTTACAAAAGGGGCGCGTGCC
CAATCGGGGGAGTTGTGCGAATGATTGCCGTTTTGATTATGAATATTATGTCAAAAACCCTGATAATGGCGTAATGATGC
GATTAGTTGAAGAAGAGGGCGTAGGCACGCATATTTTTAACGCTAAAGATTTGAATCTCTCTAGCCATATCGCTGAAATT
TTAAGTTCAAACGCCATCAGTGCACTTAAGATTGAAGGGCGCACCAAGTCCAGTTACTATGCCGCGCAAACCACGCGCAT
CTATCGTTTAGCGATTGATGATTTTTATCACAACACCTTTAGACCCAACTTTTATACTAGCGAATTGAACACGCTTAAAA
ATAGGGGTTTTACCGATGGCTATTTGATGCGAAGGCCTTTTGAAAGGCTAGACACTCAAAACCACCAAACAGCCATTAGT
GAAGGGGATTTTCAAGTCAGTGGCGAAGTGACCGAAGATGGGCGTTTTTTTGCGTGCAAATTCACCACCACCACTAACAT
CGCCTATGAAATCATCACCCCAAAAAATGCGGCTATCACGCCCATAGTCAATGAAATTGGCAAGATTTATACCTTTGAAA
AACGCTATTATTTGGTGCTTTATAAAATCCTTTTAGAAAATAACACCGAGTTAGAAACTATCCATAGCGGGAATGTGAAT
TTAGTGCGACTGCCCACGCTTTTACCGGCGTTTAGTTTTTTACGCACCCAAGTGGAGTCTAAAATGGGATTTGATTGA

Upstream 100 bases:

>100_bases
GTGTGGGTTCAGCGACTTATATCACCGGCGATGACGATAAAGATTTAGCTAGTGCTGATGATATTGAAGCGTTGATCGCT
TCTTTTGGAGCCAAGTAAAA

Downstream 100 bases:

>100_bases
CGCTAAAAATCGTGGTATTAAAAACAATTAAGAGAAGATCATGCCATTAGAAACCATCACGCTCGCTCGTATTTATGAAG
AACAAGGGTTTTTAAAAGAA

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MAELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLETFKEGIDYAHALNKKVYATINGFPFNSQLKLLEEH
ISKMAELEPDAFIIATPGVVKLALKIAPRIPIHLSTQANVLNVLDAQVFYDLGVKRIVCARELSLNDAIEIKKTLPNLEL
EIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSSHIAEI
LSSNAISALKIEGRTKSSYYAAQTTRIYRLAIDDFYHNTFRPNFYTSELNTLKNRGFTDGYLMRRPFERLDTQNHQTAIS
EGDFQVSGEVTEDGRFFACKFTTTTNIAYEIITPKNAAITPIVNEIGKIYTFEKRYYLVLYKILLENNTELETIHSGNVN
LVRLPTLLPAFSFLRTQVESKMGFD

Sequences:

>Translated_425_residues
MAELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLETFKEGIDYAHALNKKVYATINGFPFNSQLKLLEEH
ISKMAELEPDAFIIATPGVVKLALKIAPRIPIHLSTQANVLNVLDAQVFYDLGVKRIVCARELSLNDAIEIKKTLPNLEL
EIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSSHIAEI
LSSNAISALKIEGRTKSSYYAAQTTRIYRLAIDDFYHNTFRPNFYTSELNTLKNRGFTDGYLMRRPFERLDTQNHQTAIS
EGDFQVSGEVTEDGRFFACKFTTTTNIAYEIITPKNAAITPIVNEIGKIYTFEKRYYLVLYKILLENNTELETIHSGNVN
LVRLPTLLPAFSFLRTQVESKMGFD
>Mature_424_residues
AELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLETFKEGIDYAHALNKKVYATINGFPFNSQLKLLEEHI
SKMAELEPDAFIIATPGVVKLALKIAPRIPIHLSTQANVLNVLDAQVFYDLGVKRIVCARELSLNDAIEIKKTLPNLELE
IFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSSHIAEIL
SSNAISALKIEGRTKSSYYAAQTTRIYRLAIDDFYHNTFRPNFYTSELNTLKNRGFTDGYLMRRPFERLDTQNHQTAISE
GDFQVSGEVTEDGRFFACKFTTTTNIAYEIITPKNAAITPIVNEIGKIYTFEKRYYLVLYKILLENNTELETIHSGNVNL
VRLPTLLPAFSFLRTQVESKMGFD

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=399, Percent_Identity=38.0952380952381, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI87081910, Length=271, Percent_Identity=33.5793357933579, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789548, Length=298, Percent_Identity=30.5369127516779, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47898; Mature: 47767

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLETFKEGIDYAHALNKK
CCCCCCCCCCCEEEEEEEECCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCE
VYATINGFPFNSQLKLLEEHISKMAELEPDAFIIATPGVVKLALKIAPRIPIHLSTQANV
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEEEHHCCCCCEEECCCCCH
LNVLDAQVFYDLGVKRIVCARELSLNDAIEIKKTLPNLELEIFVHGSMCFAFSGRCLISA
HHHHHHHHHHHCCHHHEEHHHHCCCCCHHHHHHHCCCCEEEEEEECCEEEEECCHHHHHH
LQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSSHIAEI
HHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHH
LSSNAISALKIEGRTKSSYYAAQTTRIYRLAIDDFYHNTFRPNFYTSELNTLKNRGFTDG
HHCCCEEEEEECCCCCCCEEEEHHEEEEEEEEHHHHCCCCCCCEEHHHHHHHHHCCCCCC
YLMRRPFERLDTQNHQTAISEGDFQVSGEVTEDGRFFACKFTTTTNIAYEIITPKNAAIT
HHHCCCHHHHCCCCCCEEECCCCEEEECEEECCCCEEEEEEEEECCEEEEEECCCCCEEC
PIVNEIGKIYTFEKRYYLVLYKILLENNTELETIHSGNVNLVRLPTLLPAFSFLRTQVES
HHHHHCHHEEEECCHHHHHHEEHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH
KMGFD
HCCCC
>Mature Secondary Structure 
AELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRASKEFTLETFKEGIDYAHALNKK
CCCCCCCCCCEEEEEEEECCCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCE
VYATINGFPFNSQLKLLEEHISKMAELEPDAFIIATPGVVKLALKIAPRIPIHLSTQANV
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEEEHHCCCCCEEECCCCCH
LNVLDAQVFYDLGVKRIVCARELSLNDAIEIKKTLPNLELEIFVHGSMCFAFSGRCLISA
HHHHHHHHHHHCCHHHEEHHHHCCCCCHHHHHHHCCCCEEEEEEECCEEEEECCHHHHHH
LQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSSHIAEI
HHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHH
LSSNAISALKIEGRTKSSYYAAQTTRIYRLAIDDFYHNTFRPNFYTSELNTLKNRGFTDG
HHCCCEEEEEECCCCCCCEEEEHHEEEEEEEEHHHHCCCCCCCEEHHHHHHHHHCCCCCC
YLMRRPFERLDTQNHQTAISEGDFQVSGEVTEDGRFFACKFTTTTNIAYEIITPKNAAIT
HHHCCCHHHHCCCCCCEEECCCCEEEECEEECCCCEEEEEEEEECCEEEEEECCCCCEEC
PIVNEIGKIYTFEKRYYLVLYKILLENNTELETIHSGNVNLVRLPTLLPAFSFLRTQVES
HHHHHCHHEEEECCHHHHHHEEHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH
KMGFD
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]