| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946961
Identifier: 109946961
GI number: 109946961
Start: 298310
End: 299038
Strand: Reverse
Name: 109946961
Synonym: Hac_0351
Alternate gene names: NA
Gene position: 299038-298310 (Counterclockwise)
Preceding gene: 109946962
Following gene: 109946960
Centisome position: 19.24
GC content: 39.23
Gene sequence:
>729_bases ATGACACAAGAAGAATTAGACGCTTTAATGAGTGGGGGCGATTTAGAAAAATTAGAAGCTTTAGAGGCTGAGACTAAAGA AGAAGCTAAAGAAGAGCTCGCTAAAGAGAGTAAAGAAAATTGTAACTCTAGCGAAAAAATGATTGTCAAAAAAGAAGATG CTGAAAAATACGGCAAGATTAGTCCTAACGAATGGCCTCCCCCTCCCCCCACTGAAGAGCATAAGGTCGTGCATCAATTA GACGATGTTACAAGAGATTCTGAAGTGAAAGCCACGCAAATTTTTGATCAATTGGATTTGATTGGGGCTAGTGCTGAAAA AATCGCCAAAATGGTTAAAAAAATCCAAGAACCTCTAAAAAAACACCAAGAAATTTTTGAAAATTTGCATGCCCATTTCC CTAACATTGAATCTTTTAAAACCGTGCTCAATGAACAGCAAGAAATCCTAAACGCCCTAAAAACGATTGAAGAAGAAGCC AATAATTGCTCGGATAGCTCCATGCAAGCGATGGATATTATGCAATTTCAAGATATTCACCGCCAAAAAATTGAACGGGT AGTCAATGTCATGCGAGCGCTCAGCCAATACATGAACTCGCTTTTTGAAGGCAAAATTGATGATTCCAAGCGTGTGGGTT CAGCGACTTATATCACCGGCGATGACGATAAAGATTTAGCTAGTGCTGATGATATTGAAGCGTTGATCGCTTCTTTTGGA GCCAAGTAA
Upstream 100 bases:
>100_bases CGCCATTTTAGAGGGTGTTTTGATCGCTAAAGCTTAAGTGCGCTAAAATAACAGCAATGCATTATGGTTAAAAACGCTTT TAAACGCACAAGGAATAACG
Downstream 100 bases:
>100_bases AAGTGGCAGAATTACTCTCTCCAGCCGGTAATTTAAAAAAGCTTAAAATCGCTCTCAACTATGGGGCTGATGCGGTTTAT GGGGGAGTGAGCCATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTQEELDALMSGGDLEKLEALEAETKEEAKEELAKESKENCNSSEKMIVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQL DDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLKKHQEIFENLHAHFPNIESFKTVLNEQQEILNALKTIEEEA NNCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVGSATYITGDDDKDLASADDIEALIASFG AK
Sequences:
>Translated_242_residues MTQEELDALMSGGDLEKLEALEAETKEEAKEELAKESKENCNSSEKMIVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQL DDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLKKHQEIFENLHAHFPNIESFKTVLNEQQEILNALKTIEEEA NNCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVGSATYITGDDDKDLASADDIEALIASFG AK >Mature_241_residues TQEELDALMSGGDLEKLEALEAETKEEAKEELAKESKENCNSSEKMIVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQLD DVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLKKHQEIFENLHAHFPNIESFKTVLNEQQEILNALKTIEEEAN NCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVGSATYITGDDDKDLASADDIEALIASFGA K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27326; Mature: 27195
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEELDALMSGGDLEKLEALEAETKEEAKEELAKESKENCNSSEKMIVKKEDAEKYGKI CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCHHHHHHHCCC SPNEWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLK CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KHQEIFENLHAHFPNIESFKTVLNEQQEILNALKTIEEEANNCSDSSMQAMDIMQFQDIH HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RQKIERVVNVMRALSQYMNSLFEGKIDDSKRVGSATYITGDDDKDLASADDIEALIASFG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHC AK CC >Mature Secondary Structure TQEELDALMSGGDLEKLEALEAETKEEAKEELAKESKENCNSSEKMIVKKEDAEKYGKI CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCHHHHHHHCCC SPNEWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLK CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KHQEIFENLHAHFPNIESFKTVLNEQQEILNALKTIEEEANNCSDSSMQAMDIMQFQDIH HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RQKIERVVNVMRALSQYMNSLFEGKIDDSKRVGSATYITGDDDKDLASADDIEALIASFG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHC AK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA