| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946943
Identifier: 109946943
GI number: 109946943
Start: 281953
End: 282540
Strand: Direct
Name: 109946943
Synonym: Hac_0331
Alternate gene names: NA
Gene position: 281953-282540 (Clockwise)
Preceding gene: 109946942
Following gene: 109946944
Centisome position: 18.14
GC content: 33.84
Gene sequence:
>588_bases ATGAAAGAAAAAAACTTTTGGCCTTTAGGAATTATGAGCGTGTTAATTCTTGGGCTTGGGATTGTGGTGTTTTTGGTGGT GTTTGCCCTAAAAAATTCGCCTAAAAACGATTTGGTTTATTTTAAGGGTCATAACGAAGTGGATTTAAACTTTAACGCCA TGCTTAAAACCTATGAAAATTTTAAATCCAATTATCGTTTTTTGGTGGGTTTAAAACCCCTTGCAGAAAATTTTAAAACC CCTATTTTGCCTTATTTTTCTAAAGGCACGCATGGGGATAAAAAACTCCAAGAAAACCTTTTAAAAAACGCCTTGATTTT GGAAAAATCCAACACGCTTTATGCACAATTGCAACCGCTAAAATCCAATGTTAATTTGCAAAATATTCAGGTGTATTTAG CGTTCTATCCTAGCCAATCCCAACCCAGATTATTAGGAGTGCTTGATTGCAAAAACGCATGCGAGCCTTTAAAATTTGAT TTGTTAGAGAGCGATAAAATGGGGCGCTATAAGATCCTTTTTAAATTCATTTTTGAAAATAAAGAAGAATTGGTTTTAGA GCAATTGGCTTTTTTTAAAGAGCTTTAG
Upstream 100 bases:
>100_bases AGCGACTTTTTCAAAGGTGGTTATTTATATTTTGTTATTGACGCTTTTGGGTGCGTTTTTGGGGTTTTATTTTTTTAAAA AGTCTTAAGAGGGAAAATCA
Downstream 100 bases:
>100_bases TGTTTGTATGAGATTTTGACACACAAAGTCTCTCTAAAAAATCGCTTTAAAAATTAAAAGCTTTATTTTTATTAAATATC AATAAACCTTTTTACTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKEKNFWPLGIMSVLILGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFLVGLKPLAENFKT PILPYFSKGTHGDKKLQENLLKNALILEKSNTLYAQLQPLKSNVNLQNIQVYLAFYPSQSQPRLLGVLDCKNACEPLKFD LLESDKMGRYKILFKFIFENKEELVLEQLAFFKEL
Sequences:
>Translated_195_residues MKEKNFWPLGIMSVLILGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFLVGLKPLAENFKT PILPYFSKGTHGDKKLQENLLKNALILEKSNTLYAQLQPLKSNVNLQNIQVYLAFYPSQSQPRLLGVLDCKNACEPLKFD LLESDKMGRYKILFKFIFENKEELVLEQLAFFKEL >Mature_195_residues MKEKNFWPLGIMSVLILGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFLVGLKPLAENFKT PILPYFSKGTHGDKKLQENLLKNALILEKSNTLYAQLQPLKSNVNLQNIQVYLAFYPSQSQPRLLGVLDCKNACEPLKFD LLESDKMGRYKILFKFIFENKEELVLEQLAFFKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22579; Mature: 22579
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKNFWPLGIMSVLILGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYEN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCHHHHHHHHHH FKSNYRFLVGLKPLAENFKTPILPYFSKGTHGDKKLQENLLKNALILEKSNTLYAQLQPL HHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEEEEEH KSNVNLQNIQVYLAFYPSQSQPRLLGVLDCKNACEPLKFDLLESDKMGRYKILFKFIFEN HCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHCC KEELVLEQLAFFKEL HHHHHHHHHHHHHCC >Mature Secondary Structure MKEKNFWPLGIMSVLILGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYEN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCHHHHHHHHHH FKSNYRFLVGLKPLAENFKTPILPYFSKGTHGDKKLQENLLKNALILEKSNTLYAQLQPL HHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEEEEEH KSNVNLQNIQVYLAFYPSQSQPRLLGVLDCKNACEPLKFDLLESDKMGRYKILFKFIFEN HCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHHHCC KEELVLEQLAFFKEL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA