| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946942
Identifier: 109946942
GI number: 109946942
Start: 281353
End: 281940
Strand: Direct
Name: 109946942
Synonym: Hac_0330
Alternate gene names: NA
Gene position: 281353-281940 (Clockwise)
Preceding gene: 109946941
Following gene: 109946943
Centisome position: 18.11
GC content: 36.9
Gene sequence:
>588_bases ATGAAGAGCTTATGGCTTGTCATAGCCTTTATTCATTTTTTGTGGGCGAATGGGTCTTATGTTTTTAACAATTCTAAAGG GCGTTTGGTAGAAAAAAGCGTTTCGTTTGTGGAGGGCGTTTCTAAAGAGCTTTATCTTAAAACAGGCGTGAGCTTTGTGA TTGACATGACAGATTTTGAAAAAAATCCTATCATTCTAGCGGATAAAAAAGAGCGCCAAAGCTATCAAGAGGGCTTTTTA AAACAACTCAAACCCCCTTTTGTGGCATTCTTTTTTTACCATGACGCTCAAAAAATAGAATTGGTGGCTAACCCTAAAGA TTTGTTAGACACTGATAAAATCTTTTTTGAAAAAATCGCTCCCTTACTGCCTGCAAATGCTAAAGAATACACGCCTTCAA GGATTTCAGCCATGCTCATCAATGGCTATTCGGTTGCAGTGGATGCTTTAGCGGAAAAATATCGTGTGAATATTACGCAA AATTTTAACGCCCCTAAGGGAGCGACTTTTTCAAAGGTGGTTATTTATATTTTGTTATTGACGCTTTTGGGTGCGTTTTT GGGGTTTTATTTTTTTAAAAAGTCTTAA
Upstream 100 bases:
>100_bases AATTCACCACTCTAGAAAAAATCTTAGCCCTAATGGTCGTAGCGACCATTCTAATGACGATTGTTATTTCTTTTGTGCCT AACTTGTTTTTGTTTAGCAC
Downstream 100 bases:
>100_bases GAGGGAAAATCAATGAAAGAAAAAAACTTTTGGCCTTTAGGAATTATGAGCGTGTTAATTCTTGGGCTTGGGATTGTGGT GTTTTTGGTGGTGTTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKSLWLVIAFIHFLWANGSYVFNNSKGRLVEKSVSFVEGVSKELYLKTGVSFVIDMTDFEKNPIILADKKERQSYQEGFL KQLKPPFVAFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPANAKEYTPSRISAMLINGYSVAVDALAEKYRVNITQ NFNAPKGATFSKVVIYILLLTLLGAFLGFYFFKKS
Sequences:
>Translated_195_residues MKSLWLVIAFIHFLWANGSYVFNNSKGRLVEKSVSFVEGVSKELYLKTGVSFVIDMTDFEKNPIILADKKERQSYQEGFL KQLKPPFVAFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPANAKEYTPSRISAMLINGYSVAVDALAEKYRVNITQ NFNAPKGATFSKVVIYILLLTLLGAFLGFYFFKKS >Mature_195_residues MKSLWLVIAFIHFLWANGSYVFNNSKGRLVEKSVSFVEGVSKELYLKTGVSFVIDMTDFEKNPIILADKKERQSYQEGFL KQLKPPFVAFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPANAKEYTPSRISAMLINGYSVAVDALAEKYRVNITQ NFNAPKGATFSKVVIYILLLTLLGAFLGFYFFKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22220; Mature: 22220
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLWLVIAFIHFLWANGSYVFNNSKGRLVEKSVSFVEGVSKELYLKTGVSFVIDMTDFE CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KNPIILADKKERQSYQEGFLKQLKPPFVAFFFYHDAQKIELVANPKDLLDTDKIFFEKIA CCCEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH PLLPANAKEYTPSRISAMLINGYSVAVDALAEKYRVNITQNFNAPKGATFSKVVIYILLL HHCCCCCCCCCHHHHHHHEECCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH TLLGAFLGFYFFKKS HHHHHHHHHHHHCCC >Mature Secondary Structure MKSLWLVIAFIHFLWANGSYVFNNSKGRLVEKSVSFVEGVSKELYLKTGVSFVIDMTDFE CCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KNPIILADKKERQSYQEGFLKQLKPPFVAFFFYHDAQKIELVANPKDLLDTDKIFFEKIA CCCEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH PLLPANAKEYTPSRISAMLINGYSVAVDALAEKYRVNITQNFNAPKGATFSKVVIYILLL HHCCCCCCCCCHHHHHHHEECCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH TLLGAFLGFYFFKKS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA