| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946898
Identifier: 109946898
GI number: 109946898
Start: 235201
End: 236301
Strand: Reverse
Name: 109946898
Synonym: Hac_0284
Alternate gene names: NA
Gene position: 236301-235201 (Counterclockwise)
Preceding gene: 109946899
Following gene: 109946897
Centisome position: 15.21
GC content: 27.07
Gene sequence:
>1101_bases ATGCCTTATAGACTAGAAAAAGACTTCCAAGATTTAATTACTAATAACAGCAACATTCAAAAAGATATTTGTTCTATTTT AGAAATAAACCATAAAGATTTTAAACTTTTAAGAGAAGACACTTATATCAATGGCATTACAGCAGATTTCACGCTTTTTG AGAAAAATAAAGTCAGAGCCATTATAGAGTGTAAGGGCGGATCTATTGGAGTGAGCGAGTATGTGCGTGGTATTGGTCAA ATTTTTCAATACGAATATTTTTTTGAAAATAATCTGAGCCTTAAAAATTATGAATTTTGCCAAAATTTTAATAGCGTATT GATTTTTCCTGAAAGCGTTTTAAAAAACAACGATTTTAATGTGGGGCTTTTTAAATACCCTAAAAGCAAGAAAATTTTAG AGATCAATTCACATAATTTAGCTGTTAGATACATTAATGATAGTGAATTAGAAAAATTAAGAGAAACAAAACATAAGGAT TTTAAGGTCATTTCGCCTTATTATGTGCGCGATATTAGATTTTTTGAAGTGTATTTTTTGCTCCAAGTTTTAGCCATTTT TAAATTTAAAAATAAATTAGTGCATCGTAAAAATATAGAAGAAACTATTTTAAAAAAGACAAATTCGCTTAATAATGGTA ATTGGCGGAATGTTTTTATCACGCTATCCACATTAGGTTTCATTGATAGCAAAAATTATCCCACAAGCACAGGGTTAAAC TTTGTTAATATGAGTTATAGTGAATTTCTTGTGATGATTTTTGAAAGTTATATCAAGCCTTACTATATTGAAATTTTTAA ACTTCTAGAAAATGATACGCTTAATTTAAAAAATAATGAAATTGCAGAACGCATTAAGATGAATTTTAACAACCATGAAG TCTTATTTTTGACTGAGTCAAATTCAAGATACATTTCATCATGGCTTAACATCGCAAAAGATGATTTTGCTTTTTTTAGT TTTACTAAAAGATTAGCACAAAGGCGATTAATCTTTAACCCTTTTACTAGCAATAAAGAAAATTTTATTAAGCATATTGA AAAATATTCACTATACAATAAATATAAAGAAAGATATGAGGAAATCTTAAATGGCATATAA
Upstream 100 bases:
>100_bases CAGAGAATTTCGCTGAAGAAGTGGCTTTGCAAATGAAGTGAGTTTTTAAGTGCATTTTGCACTTAAAAACTTTCATGATT TTTAAACAATCCAAATTAAC
Downstream 100 bases:
>100_bases TGTTTGTGAATTTTTTGTGGGAGCTGGTGGTTCGCATTTAGGCTTTATCCAACAAGGTTTTAAAACGCTCTATGTTAATG ATATAGACAAAGATGCCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRAIIECKGGSIGVSEYVRGIGQ IFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFNVGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKD FKVISPYYVRDIRFFEVYFLLQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTESNSRYISSWLNIAKDDFAFFS FTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYEEILNGI
Sequences:
>Translated_366_residues MPYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRAIIECKGGSIGVSEYVRGIGQ IFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFNVGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKD FKVISPYYVRDIRFFEVYFLLQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTESNSRYISSWLNIAKDDFAFFS FTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYEEILNGI >Mature_365_residues PYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRAIIECKGGSIGVSEYVRGIGQI FQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFNVGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKDF KVISPYYVRDIRFFEVYFLLQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLNF VNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTESNSRYISSWLNIAKDDFAFFSF TKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYEEILNGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43680; Mature: 43548
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRA CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCEEEEEEEEECCCEEE IIECKGGSIGVSEYVRGIGQIFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFN EEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCEEEEEHHHHCCCCCC VGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKDFKVISPYYVRDIRFFEVYFL EEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH LQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEEHEEECCCCCCCCCCCC FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTES EEECCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC NSRYISSWLNIAKDDFAFFSFTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH EILNGI HHHCCC >Mature Secondary Structure PYRLEKDFQDLITNNSNIQKDICSILEINHKDFKLLREDTYINGITADFTLFEKNKVRA CCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECCEEEEEEEEECCCEEE IIECKGGSIGVSEYVRGIGQIFQYEYFFENNLSLKNYEFCQNFNSVLIFPESVLKNNDFN EEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCEEEEEHHHHCCCCCC VGLFKYPKSKKILEINSHNLAVRYINDSELEKLRETKHKDFKVISPYYVRDIRFFEVYFL EEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH LQVLAIFKFKNKLVHRKNIEETILKKTNSLNNGNWRNVFITLSTLGFIDSKNYPTSTGLN HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEEEHEEECCCCCCCCCCCC FVNMSYSEFLVMIFESYIKPYYIEIFKLLENDTLNLKNNEIAERIKMNFNNHEVLFLTES EEECCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC NSRYISSWLNIAKDDFAFFSFTKRLAQRRLIFNPFTSNKENFIKHIEKYSLYNKYKERYE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH EILNGI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA