| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946870
Identifier: 109946870
GI number: 109946870
Start: 209728
End: 210258
Strand: Reverse
Name: 109946870
Synonym: Hac_0253
Alternate gene names: NA
Gene position: 210258-209728 (Counterclockwise)
Preceding gene: 109946871
Following gene: 109946850
Centisome position: 13.53
GC content: 32.96
Gene sequence:
>531_bases TTGAGCGGTAGAGTTTTTTCGGCTATATTCAGCTTTATTCTTTGGGTCATTCTTTGTTTTCCGTTTATTTTTACGGTTGT TGCTCTAATATTTAATCATAGTTTTGGATTTGTTCGTTCTGATCTAGCTCTGGGTACTTTTGCTTTAGGAGGACTTGCAC TGCAGATTGTTTGGTTTTTCTTTTCATTTCTTTTGTGGGTAATATTGACTGTTTGGTGTTGTTTAGTCATGCATTCAGAT CAGAGGCAAGAAGACATAGAACAGCTTATCAATGTTATCAATGGAATTGCTAAAGCAAATTCCGGTAACTCTTTGTGCCA AGAAACACAACAAACAAATACAAATCAAACAAACGACAATGAAACTGAAGGAACTCGTATTTTTATTTCTCTAGTTATTT TCTTTTTAGCCATTATTTTGTTAGTTATTTTTTTTAGAAAAGGAGAATACCAATCAAGCAACAATCAAAGAATTGATTCT AAAAATCCTAGCCACAAGCATTATAATAAGAATAGCAACCGCTCCAATTAG
Upstream 100 bases:
>100_bases CTTGGATTCTTTAAGCAAGAAACTCGCTCAAAAACCCTTGACCTAATTTAAAAATGATGCTATAATCACTAAATTGTGAT TTATACATTAGCTGTATTTC
Downstream 100 bases:
>100_bases CGTTTGAGAGAATTGACCGTTTGAAGCATAGCATCAGCGGTTTGAATGCTTTTAGAATTCGCTTCATAAGCCCTTTGAGC GGTGATTAGATCTGTCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFFFSFLLWVILTVWCCLVMHSD QRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDNETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDS KNPSHKHYNKNSNRSN
Sequences:
>Translated_176_residues MSGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFFFSFLLWVILTVWCCLVMHSD QRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDNETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDS KNPSHKHYNKNSNRSN >Mature_175_residues SGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFFFSFLLWVILTVWCCLVMHSDQ RQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDNETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDSK NPSHKHYNKNSNRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20143; Mature: 20012
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSFLLWVILTVWCCLVMHSDQRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC ETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDSKNPSHKHYNKNSNRSN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSFLLWVILTVWCCLVMHSDQRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC ETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDSKNPSHKHYNKNSNRSN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA