The gene/protein map for NC_008229 is currently unavailable.
Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109946870

Identifier: 109946870

GI number: 109946870

Start: 209728

End: 210258

Strand: Reverse

Name: 109946870

Synonym: Hac_0253

Alternate gene names: NA

Gene position: 210258-209728 (Counterclockwise)

Preceding gene: 109946871

Following gene: 109946850

Centisome position: 13.53

GC content: 32.96

Gene sequence:

>531_bases
TTGAGCGGTAGAGTTTTTTCGGCTATATTCAGCTTTATTCTTTGGGTCATTCTTTGTTTTCCGTTTATTTTTACGGTTGT
TGCTCTAATATTTAATCATAGTTTTGGATTTGTTCGTTCTGATCTAGCTCTGGGTACTTTTGCTTTAGGAGGACTTGCAC
TGCAGATTGTTTGGTTTTTCTTTTCATTTCTTTTGTGGGTAATATTGACTGTTTGGTGTTGTTTAGTCATGCATTCAGAT
CAGAGGCAAGAAGACATAGAACAGCTTATCAATGTTATCAATGGAATTGCTAAAGCAAATTCCGGTAACTCTTTGTGCCA
AGAAACACAACAAACAAATACAAATCAAACAAACGACAATGAAACTGAAGGAACTCGTATTTTTATTTCTCTAGTTATTT
TCTTTTTAGCCATTATTTTGTTAGTTATTTTTTTTAGAAAAGGAGAATACCAATCAAGCAACAATCAAAGAATTGATTCT
AAAAATCCTAGCCACAAGCATTATAATAAGAATAGCAACCGCTCCAATTAG

Upstream 100 bases:

>100_bases
CTTGGATTCTTTAAGCAAGAAACTCGCTCAAAAACCCTTGACCTAATTTAAAAATGATGCTATAATCACTAAATTGTGAT
TTATACATTAGCTGTATTTC

Downstream 100 bases:

>100_bases
CGTTTGAGAGAATTGACCGTTTGAAGCATAGCATCAGCGGTTTGAATGCTTTTAGAATTCGCTTCATAAGCCCTTTGAGC
GGTGATTAGATCTGTCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFFFSFLLWVILTVWCCLVMHSD
QRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDNETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDS
KNPSHKHYNKNSNRSN

Sequences:

>Translated_176_residues
MSGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFFFSFLLWVILTVWCCLVMHSD
QRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDNETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDS
KNPSHKHYNKNSNRSN
>Mature_175_residues
SGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFFFSFLLWVILTVWCCLVMHSDQ
RQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDNETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDSK
NPSHKHYNKNSNRSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20143; Mature: 20012

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSFLLWVILTVWCCLVMHSDQRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDN
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
ETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDSKNPSHKHYNKNSNRSN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGRVFSAIFSFILWVILCFPFIFTVVALIFNHSFGFVRSDLALGTFALGGLALQIVWFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSFLLWVILTVWCCLVMHSDQRQEDIEQLINVINGIAKANSGNSLCQETQQTNTNQTNDN
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
ETEGTRIFISLVIFFLAIILLVIFFRKGEYQSSNNQRIDSKNPSHKHYNKNSNRSN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA