| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is secG [H]
Identifier: 109946850
GI number: 109946850
Start: 197077
End: 197640
Strand: Reverse
Name: secG [H]
Synonym: Hac_0230
Alternate gene names: 109946850
Gene position: 197640-197077 (Counterclockwise)
Preceding gene: 109946870
Following gene: 109946849
Centisome position: 12.72
GC content: 40.43
Gene sequence:
>564_bases ATGACAAGCACTCTGTTAGGCTCACAAATTGTTTTAGCGGTATTGATTGTAGTGGTGGTTTTGTTGCAAAAAAGTTCTAG CATCGGTTTAGGGGCTTATAGTGGGAGCAACGAATCTTTATTTGGCGCTAAAGGACCCGCAAGCTTTATGGCGAAATTAA CCATGTTTTTAGGTCTTTTATTTGTCATCAACACCATCGCTCTAGGCTATCTTTATAACAAAGAATACGGCAAAAGTATT TTAGATGAAACCAAAACCAACAAAGAGCTTTCGCCTTTGGTCCCTGCCACCGGCACGCTTAACTCTACACTCAATCCCAC ATTAAACCCAACGCTTAACCCTTTAGAACAAGCCCCCACTAACCCTTTAATACCAAAAGAAGCCCCTAAAACACTCCCTA AAGAAAGCCCCAAAAAGAATGATGTTAAGAAAAACGATGTTAAAAAGAGCGATACCAAAAAAACCAAAGAAAACGCAAAA ACGCACCCAACCACCCAGCACAAACCCAAAACGCATGCAACGCAAACCAACGCCCATAAAAACCAAAAAAAGGATGAAAA ATAA
Upstream 100 bases:
>100_bases ACTTAAAATTAAGACTAAATTTTAGTGCATTCTTAGCAAATTTTAGATAAGATCAAGCCTAATTTTTTCTAAATTTTAGG AATTTAAGGAATCAGTGTTT
Downstream 100 bases:
>100_bases TGTTACAAACGATTTATAACGAAACCAAAGATTTAATGCAAAAGAGTATTCAAGCCTTAAACAGAGAGTTTTCCACTTTA AGGAGCGCGAAAGTTTCAGT
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTSTLLGSQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVINTIALGYLYNKEYGKSI LDETKTNKELSPLVPATGTLNSTLNPTLNPTLNPLEQAPTNPLIPKEAPKTLPKESPKKNDVKKNDVKKSDTKKTKENAK THPTTQHKPKTHATQTNAHKNQKKDEK
Sequences:
>Translated_187_residues MTSTLLGSQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVINTIALGYLYNKEYGKSI LDETKTNKELSPLVPATGTLNSTLNPTLNPTLNPLEQAPTNPLIPKEAPKTLPKESPKKNDVKKNDVKKSDTKKTKENAK THPTTQHKPKTHATQTNAHKNQKKDEK >Mature_186_residues TSTLLGSQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVINTIALGYLYNKEYGKSIL DETKTNKELSPLVPATGTLNSTLNPTLNPTLNPLEQAPTNPLIPKEAPKTLPKESPKKNDVKKNDVKKSDTKKTKENAKT HPTTQHKPKTHATQTNAHKNQKKDEK
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 20263; Mature: 20131
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTLLGSQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH FVINTIALGYLYNKEYGKSILDETKTNKELSPLVPATGTLNSTLNPTLNPTLNPLEQAPT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC NPLIPKEAPKTLPKESPKKNDVKKNDVKKSDTKKTKENAKTHPTTQHKPKTHATQTNAHK CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH NQKKDEK CCCCCCC >Mature Secondary Structure TSTLLGSQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH FVINTIALGYLYNKEYGKSILDETKTNKELSPLVPATGTLNSTLNPTLNPTLNPLEQAPT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC NPLIPKEAPKTLPKESPKKNDVKKNDVKKSDTKKTKENAKTHPTTQHKPKTHATQTNAHK CCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH NQKKDEK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]