| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is fragment 2
Identifier: 109946824
GI number: 109946824
Start: 172032
End: 172733
Strand: Direct
Name: fragment 2
Synonym: Hac_0202
Alternate gene names: NA
Gene position: 172032-172733 (Clockwise)
Preceding gene: 109946823
Following gene: 109946825
Centisome position: 11.07
GC content: 38.6
Gene sequence:
>702_bases TTGTATTCCCCAAACTACCGCAAGCGTTATGAAGATTTTCTCAAAGCCGATTACCCTAAAATCCTTTTCACAAACAATAA AGATTTGTTTAGAGCTTTAAGTTTTTTAGGGATTGAATTGATCGGCTTGCATGTTTTAAACACAGAAAGCCTAAACTACA GCTTTGAAAAATTAAACGACACCACTATAGGCGAATCCTACTATTGCGATAAAGAAACGCACGAGCGTAACCCCATCATT AAAAAACCCTCTTATAACAAATCAGAACAACGCCTCTATATCAATAGCAGCGCTTATTTTAAGGGGGTGAGTAAAGAAAT TTATGATTATATGATAGGGGGGTATTGCGTTTTAGACAAATATTTAAAAAGCCATAAAAACGAACCTTGCAGCTTTGATC ATGTAAAAAATATCATTAAAGTCATCGCACGCACGATTGAAATCCAAAGAACGCTGGGTATTTTAACGAGCGATTTACCC CATTTAGAAGGGAATGATAATAAAGCATTAACGCAAGAAATCTTGCAAAATCCACCCCCCCCCCCCCCATTTAATACCAA TATCGCCCTTATCTTATCGTGCCAAGCCAAAGCCATTGGGAGTCTTGACTTTGATGCCGCATTCATCAATAGAAACGCAA GCGATAACAACATCTACCGCAGAGGCGGGGGCTCAGCCTTCCCTTTATTTTGCTTTATCTAA
Upstream 100 bases:
>100_bases CTACACCGAAAATTTTACGCCAGAGTTTAGAAACTTTATAGACAAGCGCTATAACCATTATTTTGAGCCACTAGAGATTT TAGGCTATATTTATGCGTTA
Downstream 100 bases:
>100_bases TCTCGCGCTAGTTTGCGATAGAGGCTCTAAAGTAAGCCCTATTTCTAATCTTTTTGTAACGAACATGCTTTGTGATTTGC ACTTGAATGGATCGGGGAGT
Product: adenine specific DNA methyltransferase fragment 2
Products: NA
Alternate protein names: D12 Class N6 Adenine-Specific DNA Methyltransferase; N-6 DNA Methylase Family
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLNDTTIGESYYCDKETHERNPII KKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDKYLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLP HLEGNDNKALTQEILQNPPPPPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI
Sequences:
>Translated_233_residues MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLNDTTIGESYYCDKETHERNPII KKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDKYLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLP HLEGNDNKALTQEILQNPPPPPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI >Mature_233_residues MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLNDTTIGESYYCDKETHERNPII KKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDKYLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLP HLEGNDNKALTQEILQNPPPPPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26689; Mature: 26689
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLND CCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCC TTIGESYYCDKETHERNPIIKKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDK CCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHH YLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLPHLEGNDNKALTQEILQNPPP HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC PPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI CCCCCCCEEEEEEECHHHCCCCCCCHHHHCCCCCCCCEEECCCCCCCCEEEEC >Mature Secondary Structure MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLND CCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCC TTIGESYYCDKETHERNPIIKKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDK CCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHH YLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLPHLEGNDNKALTQEILQNPPP HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC PPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI CCCCCCCEEEEEEECHHHCCCCCCCHHHHCCCCCCCCEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA