Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is fragment 2

Identifier: 109946824

GI number: 109946824

Start: 172032

End: 172733

Strand: Direct

Name: fragment 2

Synonym: Hac_0202

Alternate gene names: NA

Gene position: 172032-172733 (Clockwise)

Preceding gene: 109946823

Following gene: 109946825

Centisome position: 11.07

GC content: 38.6

Gene sequence:

>702_bases
TTGTATTCCCCAAACTACCGCAAGCGTTATGAAGATTTTCTCAAAGCCGATTACCCTAAAATCCTTTTCACAAACAATAA
AGATTTGTTTAGAGCTTTAAGTTTTTTAGGGATTGAATTGATCGGCTTGCATGTTTTAAACACAGAAAGCCTAAACTACA
GCTTTGAAAAATTAAACGACACCACTATAGGCGAATCCTACTATTGCGATAAAGAAACGCACGAGCGTAACCCCATCATT
AAAAAACCCTCTTATAACAAATCAGAACAACGCCTCTATATCAATAGCAGCGCTTATTTTAAGGGGGTGAGTAAAGAAAT
TTATGATTATATGATAGGGGGGTATTGCGTTTTAGACAAATATTTAAAAAGCCATAAAAACGAACCTTGCAGCTTTGATC
ATGTAAAAAATATCATTAAAGTCATCGCACGCACGATTGAAATCCAAAGAACGCTGGGTATTTTAACGAGCGATTTACCC
CATTTAGAAGGGAATGATAATAAAGCATTAACGCAAGAAATCTTGCAAAATCCACCCCCCCCCCCCCCATTTAATACCAA
TATCGCCCTTATCTTATCGTGCCAAGCCAAAGCCATTGGGAGTCTTGACTTTGATGCCGCATTCATCAATAGAAACGCAA
GCGATAACAACATCTACCGCAGAGGCGGGGGCTCAGCCTTCCCTTTATTTTGCTTTATCTAA

Upstream 100 bases:

>100_bases
CTACACCGAAAATTTTACGCCAGAGTTTAGAAACTTTATAGACAAGCGCTATAACCATTATTTTGAGCCACTAGAGATTT
TAGGCTATATTTATGCGTTA

Downstream 100 bases:

>100_bases
TCTCGCGCTAGTTTGCGATAGAGGCTCTAAAGTAAGCCCTATTTCTAATCTTTTTGTAACGAACATGCTTTGTGATTTGC
ACTTGAATGGATCGGGGAGT

Product: adenine specific DNA methyltransferase fragment 2

Products: NA

Alternate protein names: D12 Class N6 Adenine-Specific DNA Methyltransferase; N-6 DNA Methylase Family

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLNDTTIGESYYCDKETHERNPII
KKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDKYLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLP
HLEGNDNKALTQEILQNPPPPPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI

Sequences:

>Translated_233_residues
MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLNDTTIGESYYCDKETHERNPII
KKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDKYLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLP
HLEGNDNKALTQEILQNPPPPPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI
>Mature_233_residues
MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLNDTTIGESYYCDKETHERNPII
KKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDKYLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLP
HLEGNDNKALTQEILQNPPPPPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26689; Mature: 26689

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLND
CCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCC
TTIGESYYCDKETHERNPIIKKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDK
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHH
YLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLPHLEGNDNKALTQEILQNPPP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
PPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI
CCCCCCCEEEEEEECHHHCCCCCCCHHHHCCCCCCCCEEECCCCCCCCEEEEC
>Mature Secondary Structure
MYSPNYRKRYEDFLKADYPKILFTNNKDLFRALSFLGIELIGLHVLNTESLNYSFEKLND
CCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHCCC
TTIGESYYCDKETHERNPIIKKPSYNKSEQRLYINSSAYFKGVSKEIYDYMIGGYCVLDK
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHH
YLKSHKNEPCSFDHVKNIIKVIARTIEIQRTLGILTSDLPHLEGNDNKALTQEILQNPPP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC
PPPFNTNIALILSCQAKAIGSLDFDAAFINRNASDNNIYRRGGGSAFPLFCFI
CCCCCCCEEEEEEECHHHCCCCCCCHHHHCCCCCCCCEEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA