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The map label for this gene is comE

Identifier: 109946816

GI number: 109946816

Start: 163457

End: 164773

Strand: Direct

Name: comE

Synonym: Hac_0194

Alternate gene names: NA

Gene position: 163457-164773 (Clockwise)

Preceding gene: 109946815

Following gene: 109946817

Centisome position: 10.52

GC content: 35.38

Gene sequence:

>1317_bases
TTGAAAGATAAAACCTTTCAAGGGGCGTTTGATATTCTTTCAAGCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTTGTCATTAACCTCTATGCAGAATACTTGAATTATCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGGACG
CTCAAATCTTATTGCAATACCCTAAGACAAACAATCAAAAATCCTATTTCGTTTTAAAGCTCCAATCTAAAGGCATGATT
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCACATTTTTTTGGCAAGATCAAGCCTTGCTC
GTTTTTAGAATCGTTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACACGAAAACAAGATTTTAAATCCCACT
TACGCAACTTAATTGATAGCGTCCATGAAAACGCTTTAGTGGGCAATTTGTATCGAGCGCTTTTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAAAGCCAACACGCTAGGGATCAACCACTTATTAGCCATTAGCGGGTTTCATTTAGGGGTTTT
GAGCGCGAGCGTTTATTTTCTTTTCTCTCTTTTTTATACTCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTTTGGGTTTTTATGCTAGGGTATTTAGTGCTATTAGATTTTTTACCCTCTTTTTTTAGGGCG
TTTTTAATGGGCTTACTAGGGTTTTTGGCATGCTTTTTTGGGGCAAGGATTTTAAATTTTAAACTTTTGATTTTAGCGTG
TTGTATCGCTATTGCCCTGCTTCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACATGCCAAAGTTTTTTTTAAAAACTCTTCTTTTTTGATGCGATCGTTTCAAGCCATAAGCTTGAGC
GTGTTGGTGTTTTCAAACATGCTCATTGTTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTTTTTAGCATTCC
TTTAGGTTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTAGGTTTGGGGTCTTTATTGGATCAAA
TTTTAAGCATGCCTTTAGAAATCCCCACGATCTCTATTTTTTCGCCCTTATGGCTTTTGGGGGTGCATTTCTTTTTAACG
ATTTTGAGCGTGCGATTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCATGGGCTTTTTCTTGTATTGTTGCTATCA
ATATACTATAATGCCTAGTTTAATTGTAGGGGGTTAA

Upstream 100 bases:

>100_bases
TATATACGCGCTTTAACGCTCCTTTCACGCGCTATGAAGACATGCCTATAGATTCTCATTTAGAAGAAGGGCAAGAAACT
AAATTTGAAATACCCATAAC

Downstream 100 bases:

>100_bases
GGGCAATACCATGTTAAATTTAAGTGCACTTTAAGGGTTTAGAAAAGTCATTTTACTAGGGATCAAATAATTGCTTAAAA
AAATCACGCATAAAATCAAA

Product: DNA transfer protein ComE

Products: NA

Alternate protein names: ComEC/Rec2-Related Protein; Integral Membrane Protein; DNA Transfer Protein ComE; DNA Uptake Protein; ComEC/Rec2 Family Protein; Inner Membrane Protein OxaA; Competence Protein; Comec/Rec2-Related Protein; Competence Locus E

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKDKTFQGAFDILSSPKEYLWCGVVLSLLFVINLYAEYLNYQKLDFSKPTSLDAQILLQYPKTNNQKSYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAHFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHLRNLIDSVHENALVGNLYRALFIGDSL
NKDLRDKANTLGINHLLAISGFHLGVLSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFMLGYLVLLDFLPSFFRA
FLMGLLGFLACFFGARILNFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHAKVFFKNSSFLMRSFQAISLS
VLVFSNMLIVVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDQILSMPLEIPTISIFSPLWLLGVHFFLT
ILSVRFFKVYLSMNVLSMGFFLYCCYQYTIMPSLIVGG

Sequences:

>Translated_438_residues
MKDKTFQGAFDILSSPKEYLWCGVVLSLLFVINLYAEYLNYQKLDFSKPTSLDAQILLQYPKTNNQKSYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAHFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHLRNLIDSVHENALVGNLYRALFIGDSL
NKDLRDKANTLGINHLLAISGFHLGVLSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFMLGYLVLLDFLPSFFRA
FLMGLLGFLACFFGARILNFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHAKVFFKNSSFLMRSFQAISLS
VLVFSNMLIVVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDQILSMPLEIPTISIFSPLWLLGVHFFLT
ILSVRFFKVYLSMNVLSMGFFLYCCYQYTIMPSLIVGG
>Mature_438_residues
MKDKTFQGAFDILSSPKEYLWCGVVLSLLFVINLYAEYLNYQKLDFSKPTSLDAQILLQYPKTNNQKSYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAHFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHLRNLIDSVHENALVGNLYRALFIGDSL
NKDLRDKANTLGINHLLAISGFHLGVLSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFMLGYLVLLDFLPSFFRA
FLMGLLGFLACFFGARILNFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHAKVFFKNSSFLMRSFQAISLS
VLVFSNMLIVVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDQILSMPLEIPTISIFSPLWLLGVHFFLT
ILSVRFFKVYLSMNVLSMGFFLYCCYQYTIMPSLIVGG

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50373; Mature: 50373

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKTFQGAFDILSSPKEYLWCGVVLSLLFVINLYAEYLNYQKLDFSKPTSLDAQILLQY
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEC
PKTNNQKSYFVLKLQSKGMIFYTTIKEPLKNLQYRHAHFFGKIKPCSFLESLKSCFFQTY
CCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SFSLTRKQDFKSHLRNLIDSVHENALVGNLYRALFIGDSLNKDLRDKANTLGINHLLAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH
GFHLGVLSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFMLGYLVLLDFLPSFFRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMGLLGFLACFFGARILNFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVFFKNSSFLMRSFQAISLSVLVFSNMLIVVHAFFPMFSPYQLFSIPLGLIFIVFFPLSL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FLHAVGLGSLLDQILSMPLEIPTISIFSPLWLLGVHFFLTILSVRFFKVYLSMNVLSMGF
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLYCCYQYTIMPSLIVGG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA