Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109946801

Identifier: 109946801

GI number: 109946801

Start: 150551

End: 151330

Strand: Direct

Name: 109946801

Synonym: Hac_0178

Alternate gene names: NA

Gene position: 150551-151330 (Clockwise)

Preceding gene: 109946789

Following gene: 109946808

Centisome position: 9.69

GC content: 37.95

Gene sequence:

>780_bases
ATGGCGTGTTGGTGTAAAAGATTGGCGGTTAGTTGTTGTATCTTTTTATTGTCATGCGTGATGAACGCCCATAATGTTGA
GCTTGTTAGAAACGATCCGCCCCTTGATTCAGAACTCCCCACATGGGTCTATTCTATTGCGTTATTGAAAGTGTATTTTA
GCGATGGGACTTATAAAGAAGGCTATGCGACTTTATTAGAAAATGGGCATTATATCGCTTCTTCTGAAACGCTTTATTCC
AATGGTTTGTATCCTAAAACGATTTTAGCCAAGATGCAAGACAGTAGTGCTAAAGAGTTGATTTGCATAGCTAGCTTGCA
CCTTGAAGCGATTGATAGGGATCAAGGGCTTTCGCTTTTAAAAACCGCCGATTTTAGAGATGATTATTGCCATAAAAGAG
AGGAGAGCTACTATCATGCAAGGATTTATACCAAATACGCTCAAACTTTTTATTCAAACCCCTATATAAATAAAAAAACA
TCCGATTCCGATCTTTATTACCCTGCATTAAATGAGGGGAATTCTTTTTCTATACAGACGATGGGCATTTCTGTGGCTGA
ACTTTTAAAATCCAAAAAGTTTCTTTCGCTGGATAGCTCTTTTAAAAAAGGGAGCGTGTTGTGGGGAGGGAGACCTTATT
TTAGCGAGATGGGGGAGTTTATGGGAATGGCTAGCAGCGTTTTAGGGGATCAAGAAAATTTGGTGATTATCCCTAGAGAA
AAGATTGTGCAATTTTTGAATACTCTAAAAAATCAAAACATTTTTCAAAACATTCCCTAG

Upstream 100 bases:

>100_bases
ATTTTCTATTATAGCAATAAATTAAAGCAAATGGTATTTTAGCCGATAGTAATTTAGGATGTCTTTGAAATCTAAGCGGT
AAGTTAATGTGGGTTTAGTC

Downstream 100 bases:

>100_bases
CTTTAAGCAAACCTTAAGCTTTCTATGACTATAATTTCATTTCCTTGTTTCAGCAAGGGCTTTTAAAAAGCCGTTTTGTA
ACCTGCAAGGATAGCTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKEGYATLLENGHYIASSETLYS
NGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLLKTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKT
SDSDLYYPALNEGNSFSIQTMGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE
KIVQFLNTLKNQNIFQNIP

Sequences:

>Translated_259_residues
MACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKEGYATLLENGHYIASSETLYS
NGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLLKTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKT
SDSDLYYPALNEGNSFSIQTMGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE
KIVQFLNTLKNQNIFQNIP
>Mature_258_residues
ACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKEGYATLLENGHYIASSETLYSN
GLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLLKTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKTS
DSDLYYPALNEGNSFSIQTMGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPREK
IVQFLNTLKNQNIFQNIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29420; Mature: 29289

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKE
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
GYATLLENGHYIASSETLYSNGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLL
HHHHHHHCCCEEECCCCHHCCCCCHHHHHHHHCCCCCHHEEEHHHHHHHHHCCCCCCHHH
KTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKTSDSDLYYPALNEGNSFSIQT
HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEE
MGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE
CCCHHHHHHHCCHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECHH
KIVQFLNTLKNQNIFQNIP
HHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure 
ACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKE
CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
GYATLLENGHYIASSETLYSNGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLL
HHHHHHHCCCEEECCCCHHCCCCCHHHHHHHHCCCCCHHEEEHHHHHHHHHCCCCCCHHH
KTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKTSDSDLYYPALNEGNSFSIQT
HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEE
MGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE
CCCHHHHHHHCCHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECHH
KIVQFLNTLKNQNIFQNIP
HHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA