| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is mjaIM [H]
Identifier: 109946808
GI number: 109946808
Start: 155403
End: 156275
Strand: Direct
Name: mjaIM [H]
Synonym: Hac_0185
Alternate gene names: 109946808
Gene position: 155403-156275 (Clockwise)
Preceding gene: 109946801
Following gene: 109946809
Centisome position: 10.0
GC content: 34.71
Gene sequence:
>873_bases TTGAACATCAATAAAGTGTTTTATCATAGTAGCACCAACATGAATGAAGTGCTAGATAATAGCGTGGATTTAATCATCAC AAGCCCACCTTATTTCAACATTAAAGATTACACGAAAAATGGCACACAAGATTTACAGCATTCAACCCAACATGTTGAAG ATTTAGGGGCGTTAGAAAAATATGAAGATTACCTTTTAGGTCTTTTAAAAGTTTGGCATGAATGCTATAGGGTGCTAAAA CCAAATGGTAAGCTATGCATTAATGTGCCTTTAATACCCATGCTTAAAAAGGTTTTAAACACGCACTATAACCGCCATAT TTTTGATCTGCATGCTGATATTCAACACTCCATTTTGCGTGATTTAAACAACATGTTGGAAAACAAGCCTAAAATATTTT TATTAGATGTCTATATTTGGAAACGCACAAATCCTACTAAAAAATTGATGTTTGGGAGTTACCCTTATCCTAGAAATTTT TATGCACAAAATACTATAGAATTTATTGGCGTGTTTGTCAAAGACGGCAAGCCCAAACAACCCACAAAAGAACAAAGAGA ACAAAAAGAACAAAGCCAATTAACTCAAGAGGAGTGGGTAGAATTTACCAAACAAATTTGGGAAATCCCAATCCCTAACA AAAACGATATTGCTTTTGGTAAGCATGCGGCTTTAATGCCGGCTGAATTAGCAAGGCGTTTGATTAGATTGTATAGTTGC GTGGGCGATGTGGTGCTAGATCCATTTAGCGGGAGCGGAACAACTTTAAGAGAAGCAAAACTTTTAAAAAGGAATTTTAT AGGCTATGAACTCTATGAAAATTATAAGCCCTTGATTGAGCAAAAATTAGGAAACTTGTTTGATTTTGAATAA
Upstream 100 bases:
>100_bases CTCTAATTTTTTATAGATCCATGCTTTAAAAGGCTCTCATTTCATTGTAAAATTCTTTCATGTAAATCTATTAAGTTCTT AATAAAAGGTAAAAATAACA
Downstream 100 bases:
>100_bases GATTTATATAGAAGATGTTTTTGCTTTCTTAGACAAGTTAGAAGATAAAAGCGTTGATTTAGCTATTATTGACCCTCCTT ACAATCTTAAAATTGCTTCA
Product: modification methylase mjai
Products: NA
Alternate protein names: M.MjaI; N-4 cytosine-specific methyltransferase MjaI [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNINKVFYHSSTNMNEVLDNSVDLIITSPPYFNIKDYTKNGTQDLQHSTQHVEDLGALEKYEDYLLGLLKVWHECYRVLK PNGKLCINVPLIPMLKKVLNTHYNRHIFDLHADIQHSILRDLNNMLENKPKIFLLDVYIWKRTNPTKKLMFGSYPYPRNF YAQNTIEFIGVFVKDGKPKQPTKEQREQKEQSQLTQEEWVEFTKQIWEIPIPNKNDIAFGKHAALMPAELARRLIRLYSC VGDVVLDPFSGSGTTLREAKLLKRNFIGYELYENYKPLIEQKLGNLFDFE
Sequences:
>Translated_290_residues MNINKVFYHSSTNMNEVLDNSVDLIITSPPYFNIKDYTKNGTQDLQHSTQHVEDLGALEKYEDYLLGLLKVWHECYRVLK PNGKLCINVPLIPMLKKVLNTHYNRHIFDLHADIQHSILRDLNNMLENKPKIFLLDVYIWKRTNPTKKLMFGSYPYPRNF YAQNTIEFIGVFVKDGKPKQPTKEQREQKEQSQLTQEEWVEFTKQIWEIPIPNKNDIAFGKHAALMPAELARRLIRLYSC VGDVVLDPFSGSGTTLREAKLLKRNFIGYELYENYKPLIEQKLGNLFDFE >Mature_290_residues MNINKVFYHSSTNMNEVLDNSVDLIITSPPYFNIKDYTKNGTQDLQHSTQHVEDLGALEKYEDYLLGLLKVWHECYRVLK PNGKLCINVPLIPMLKKVLNTHYNRHIFDLHADIQHSILRDLNNMLENKPKIFLLDVYIWKRTNPTKKLMFGSYPYPRNF YAQNTIEFIGVFVKDGKPKQPTKEQREQKEQSQLTQEEWVEFTKQIWEIPIPNKNDIAFGKHAALMPAELARRLIRLYSC VGDVVLDPFSGSGTTLREAKLLKRNFIGYELYENYKPLIEQKLGNLFDFE
Specific function: This methylase recognizes the double-stranded sequence CTAG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the MjaI endonuclease (Potential) [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 34044; Mature: 34044
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINKVFYHSSTNMNEVLDNSVDLIITSPPYFNIKDYTKNGTQDLQHSTQHVEDLGALEK CCCCEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHH YEDYLLGLLKVWHECYRVLKPNGKLCINVPLIPMLKKVLNTHYNRHIFDLHADIQHSILR HHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH DLNNMLENKPKIFLLDVYIWKRTNPTKKLMFGSYPYPRNFYAQNTIEFIGVFVKDGKPKQ HHHHHHHCCCCEEEEEEEEEECCCCHHHHEECCCCCCCCCCHHHHHHHHEEEEECCCCCC PTKEQREQKEQSQLTQEEWVEFTKQIWEIPIPNKNDIAFGKHAALMPAELARRLIRLYSC CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH VGDVVLDPFSGSGTTLREAKLLKRNFIGYELYENYKPLIEQKLGNLFDFE HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNINKVFYHSSTNMNEVLDNSVDLIITSPPYFNIKDYTKNGTQDLQHSTQHVEDLGALEK CCCCEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHH YEDYLLGLLKVWHECYRVLKPNGKLCINVPLIPMLKKVLNTHYNRHIFDLHADIQHSILR HHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH DLNNMLENKPKIFLLDVYIWKRTNPTKKLMFGSYPYPRNFYAQNTIEFIGVFVKDGKPKQ HHHHHHHCCCCEEEEEEEEEECCCCHHHHEECCCCCCCCCCHHHHHHHHEEEEECCCCCC PTKEQREQKEQSQLTQEEWVEFTKQIWEIPIPNKNDIAFGKHAALMPAELARRLIRLYSC CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH VGDVVLDPFSGSGTTLREAKLLKRNFIGYELYENYKPLIEQKLGNLFDFE HHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]