Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109946789

Identifier: 109946789

GI number: 109946789

Start: 141771

End: 142673

Strand: Direct

Name: 109946789

Synonym: Hac_0166

Alternate gene names: NA

Gene position: 141771-142673 (Clockwise)

Preceding gene: 109946788

Following gene: 109946801

Centisome position: 9.12

GC content: 39.31

Gene sequence:

>903_bases
ATGAAAAAGATTATTCTTGCATGCCTAATGGTTTTTGTGGGTGCTAATTTGAGTGCAGAGCCTAAGTGGTATAGCAAGGC
ATACAAAAAAGAGCAAAAAGGCTATTTTTATGGCAATGGTGCAGCCGCATCCAAAGAAACTTCCAAGCAAAGAGCGTTAG
CGGATTTAGTGGCGTCTATTAGCGTGGTGGTCAATTCGCAAATCCATATCCAAAGAAGTCGGATGAATAACCAGTTGAAA
TCCAGCGATTCGCAAACCATCAACTTAAAAACCGATGACTTGGAATTGAATAATATAGAAATAGTCAAACAAGAAGTGCA
AAAAGGGACTTACTACACCCAATTAAGGATCAATAAAAATTTGTTTTTGCAAGGCTTAAGGGATAAGTATAACGCTCTTT
ATGAGCAATTTGCTACTTTGATGCCTAAAGCTTGCAAAGGGGTTTTTTTGCAACAATCTAAAGGCTTGGGGGATTTACTC
GCCAAAACAATACCTATGGAAAGGATCTTAAAAGCGTATTCTATTCCGGTTAGCTCGTTAGAGACTTATGAAAAAACCTA
TTATCAAAACGCTTTCAAGCCTAAAGTGCAACTTGTTTTTGATGACAACAGCGATGCAGAAATCAAAAGTGCTCTTATAA
GCGCGTATGCTAGAGTATTGACTCCTAGCAATGACGAAAAGCTCTATCAAATCAAAAACGAGATTTTTACAGACAACGCC
AACGGCACGCGTATTAGGGTGTTTATCAGTGCGAGCGATTGTCAAGGCACGCCCATACTCAACAGAAACATTGAGGTGGA
TGAAAAGGATAAGAATTTCGCTCTCACGCGCTTGCAGTCTTTGCTTTATAAAGAATTGAAAGACTATGCCAATAAGGAAG
GGCAAGGCAATACAGGGCTATAA

Upstream 100 bases:

>100_bases
CCGCTAGCCAGCTAAAGGCGACTTTTATTGGTGCAGATAAAGTGTATGTGCTGATAGAAATTGATAAGAAAAACATCGCT
TTAATGAATAAGGATCAATG

Downstream 100 bases:

>100_bases
TGCCAATCCCCTTGCACTTGCTTTTTAAAACAACTATTCTAAAAAATTTTGGTTTTTTCTCATTAAACATTAATAATGAA
TTTTTAAATAATGCTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASISVVVNSQIHIQRSRMNNQLK
SSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKNLFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLL
AKTIPMERILKAYSIPVSSLETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA
NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL

Sequences:

>Translated_300_residues
MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASISVVVNSQIHIQRSRMNNQLK
SSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKNLFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLL
AKTIPMERILKAYSIPVSSLETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA
NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL
>Mature_300_residues
MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASISVVVNSQIHIQRSRMNNQLK
SSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKNLFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLL
AKTIPMERILKAYSIPVSSLETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA
NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33935; Mature: 33935

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASI
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHH
SVVVNSQIHIQRSRMNNQLKSSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKN
HHHHCCHHEEEHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECHH
LFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLLAKTIPMERILKAYSIPVSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCHHHH
ETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL
CCCEEEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASI
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHH
SVVVNSQIHIQRSRMNNQLKSSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKN
HHHHCCHHEEEHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECHH
LFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLLAKTIPMERILKAYSIPVSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCHHHH
ETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL
CCCEEEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA