| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946789
Identifier: 109946789
GI number: 109946789
Start: 141771
End: 142673
Strand: Direct
Name: 109946789
Synonym: Hac_0166
Alternate gene names: NA
Gene position: 141771-142673 (Clockwise)
Preceding gene: 109946788
Following gene: 109946801
Centisome position: 9.12
GC content: 39.31
Gene sequence:
>903_bases ATGAAAAAGATTATTCTTGCATGCCTAATGGTTTTTGTGGGTGCTAATTTGAGTGCAGAGCCTAAGTGGTATAGCAAGGC ATACAAAAAAGAGCAAAAAGGCTATTTTTATGGCAATGGTGCAGCCGCATCCAAAGAAACTTCCAAGCAAAGAGCGTTAG CGGATTTAGTGGCGTCTATTAGCGTGGTGGTCAATTCGCAAATCCATATCCAAAGAAGTCGGATGAATAACCAGTTGAAA TCCAGCGATTCGCAAACCATCAACTTAAAAACCGATGACTTGGAATTGAATAATATAGAAATAGTCAAACAAGAAGTGCA AAAAGGGACTTACTACACCCAATTAAGGATCAATAAAAATTTGTTTTTGCAAGGCTTAAGGGATAAGTATAACGCTCTTT ATGAGCAATTTGCTACTTTGATGCCTAAAGCTTGCAAAGGGGTTTTTTTGCAACAATCTAAAGGCTTGGGGGATTTACTC GCCAAAACAATACCTATGGAAAGGATCTTAAAAGCGTATTCTATTCCGGTTAGCTCGTTAGAGACTTATGAAAAAACCTA TTATCAAAACGCTTTCAAGCCTAAAGTGCAACTTGTTTTTGATGACAACAGCGATGCAGAAATCAAAAGTGCTCTTATAA GCGCGTATGCTAGAGTATTGACTCCTAGCAATGACGAAAAGCTCTATCAAATCAAAAACGAGATTTTTACAGACAACGCC AACGGCACGCGTATTAGGGTGTTTATCAGTGCGAGCGATTGTCAAGGCACGCCCATACTCAACAGAAACATTGAGGTGGA TGAAAAGGATAAGAATTTCGCTCTCACGCGCTTGCAGTCTTTGCTTTATAAAGAATTGAAAGACTATGCCAATAAGGAAG GGCAAGGCAATACAGGGCTATAA
Upstream 100 bases:
>100_bases CCGCTAGCCAGCTAAAGGCGACTTTTATTGGTGCAGATAAAGTGTATGTGCTGATAGAAATTGATAAGAAAAACATCGCT TTAATGAATAAGGATCAATG
Downstream 100 bases:
>100_bases TGCCAATCCCCTTGCACTTGCTTTTTAAAACAACTATTCTAAAAAATTTTGGTTTTTTCTCATTAAACATTAATAATGAA TTTTTAAATAATGCTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASISVVVNSQIHIQRSRMNNQLK SSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKNLFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLL AKTIPMERILKAYSIPVSSLETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL
Sequences:
>Translated_300_residues MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASISVVVNSQIHIQRSRMNNQLK SSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKNLFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLL AKTIPMERILKAYSIPVSSLETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL >Mature_300_residues MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASISVVVNSQIHIQRSRMNNQLK SSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKNLFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLL AKTIPMERILKAYSIPVSSLETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33935; Mature: 33935
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASI CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHH SVVVNSQIHIQRSRMNNQLKSSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKN HHHHCCHHEEEHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECHH LFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLLAKTIPMERILKAYSIPVSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCHHHH ETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL CCCEEEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKIILACLMVFVGANLSAEPKWYSKAYKKEQKGYFYGNGAAASKETSKQRALADLVASI CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHH SVVVNSQIHIQRSRMNNQLKSSDSQTINLKTDDLELNNIEIVKQEVQKGTYYTQLRINKN HHHHCCHHEEEHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECHH LFLQGLRDKYNALYEQFATLMPKACKGVFLQQSKGLGDLLAKTIPMERILKAYSIPVSSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCHHHH ETYEKTYYQNAFKPKVQLVFDDNSDAEIKSALISAYARVLTPSNDEKLYQIKNEIFTDNA HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC NGTRIRVFISASDCQGTPILNRNIEVDEKDKNFALTRLQSLLYKELKDYANKEGQGNTGL CCCEEEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA