| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109946801
Identifier: 109946801
GI number: 109946801
Start: 150551
End: 151330
Strand: Direct
Name: 109946801
Synonym: Hac_0178
Alternate gene names: NA
Gene position: 150551-151330 (Clockwise)
Preceding gene: 109946789
Following gene: 109946808
Centisome position: 9.69
GC content: 37.95
Gene sequence:
>780_bases ATGGCGTGTTGGTGTAAAAGATTGGCGGTTAGTTGTTGTATCTTTTTATTGTCATGCGTGATGAACGCCCATAATGTTGA GCTTGTTAGAAACGATCCGCCCCTTGATTCAGAACTCCCCACATGGGTCTATTCTATTGCGTTATTGAAAGTGTATTTTA GCGATGGGACTTATAAAGAAGGCTATGCGACTTTATTAGAAAATGGGCATTATATCGCTTCTTCTGAAACGCTTTATTCC AATGGTTTGTATCCTAAAACGATTTTAGCCAAGATGCAAGACAGTAGTGCTAAAGAGTTGATTTGCATAGCTAGCTTGCA CCTTGAAGCGATTGATAGGGATCAAGGGCTTTCGCTTTTAAAAACCGCCGATTTTAGAGATGATTATTGCCATAAAAGAG AGGAGAGCTACTATCATGCAAGGATTTATACCAAATACGCTCAAACTTTTTATTCAAACCCCTATATAAATAAAAAAACA TCCGATTCCGATCTTTATTACCCTGCATTAAATGAGGGGAATTCTTTTTCTATACAGACGATGGGCATTTCTGTGGCTGA ACTTTTAAAATCCAAAAAGTTTCTTTCGCTGGATAGCTCTTTTAAAAAAGGGAGCGTGTTGTGGGGAGGGAGACCTTATT TTAGCGAGATGGGGGAGTTTATGGGAATGGCTAGCAGCGTTTTAGGGGATCAAGAAAATTTGGTGATTATCCCTAGAGAA AAGATTGTGCAATTTTTGAATACTCTAAAAAATCAAAACATTTTTCAAAACATTCCCTAG
Upstream 100 bases:
>100_bases ATTTTCTATTATAGCAATAAATTAAAGCAAATGGTATTTTAGCCGATAGTAATTTAGGATGTCTTTGAAATCTAAGCGGT AAGTTAATGTGGGTTTAGTC
Downstream 100 bases:
>100_bases CTTTAAGCAAACCTTAAGCTTTCTATGACTATAATTTCATTTCCTTGTTTCAGCAAGGGCTTTTAAAAAGCCGTTTTGTA ACCTGCAAGGATAGCTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKEGYATLLENGHYIASSETLYS NGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLLKTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKT SDSDLYYPALNEGNSFSIQTMGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE KIVQFLNTLKNQNIFQNIP
Sequences:
>Translated_259_residues MACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKEGYATLLENGHYIASSETLYS NGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLLKTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKT SDSDLYYPALNEGNSFSIQTMGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE KIVQFLNTLKNQNIFQNIP >Mature_258_residues ACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKEGYATLLENGHYIASSETLYSN GLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLLKTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKTS DSDLYYPALNEGNSFSIQTMGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPREK IVQFLNTLKNQNIFQNIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29420; Mature: 29289
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKE CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCH GYATLLENGHYIASSETLYSNGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLL HHHHHHHCCCEEECCCCHHCCCCCHHHHHHHHCCCCCHHEEEHHHHHHHHHCCCCCCHHH KTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKTSDSDLYYPALNEGNSFSIQT HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEE MGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE CCCHHHHHHHCCHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECHH KIVQFLNTLKNQNIFQNIP HHHHHHHHHCCCCHHCCCC >Mature Secondary Structure ACWCKRLAVSCCIFLLSCVMNAHNVELVRNDPPLDSELPTWVYSIALLKVYFSDGTYKE CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCH GYATLLENGHYIASSETLYSNGLYPKTILAKMQDSSAKELICIASLHLEAIDRDQGLSLL HHHHHHHCCCEEECCCCHHCCCCCHHHHHHHHCCCCCHHEEEHHHHHHHHHCCCCCCHHH KTADFRDDYCHKREESYYHARIYTKYAQTFYSNPYINKKTSDSDLYYPALNEGNSFSIQT HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEE MGISVAELLKSKKFLSLDSSFKKGSVLWGGRPYFSEMGEFMGMASSVLGDQENLVIIPRE CCCHHHHHHHCCHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECHH KIVQFLNTLKNQNIFQNIP HHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA