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The map label for this gene is 109946724

Identifier: 109946724

GI number: 109946724

Start: 88497

End: 89654

Strand: Direct

Name: 109946724

Synonym: Hac_0095

Alternate gene names: NA

Gene position: 88497-89654 (Clockwise)

Preceding gene: 109946713

Following gene: 109946728

Centisome position: 5.7

GC content: 42.57

Gene sequence:

>1158_bases
ATGGCACTCCATTTTATAGTAAAGAAGAAGAGTAGGATGCAAAATCGCAGGGTTTGTAAAAATTTTAATCGTAAGGAATC
TGTTTTGATGGCTCAATTTGTCTCTAAAAAAGGCTCGGTAGTTTTAGGTGCTCTTTTGAGTTCGTTGTGGCTGACAAGCC
CCTTAATCGCCCATGAAAAGAATGGTGCGTTTGTGGGGATCAGTTTGGAAGTGGGTAGGGCTGATCAAAAAACAAACGCT
TATAAAAACGGCGAATTGTTTCAAGTGCCTTTTGGCGATGTTTCGGCTAATGATGATGGCAATGTGCCCAATGGGCAAAC
AGGTGGCTGTCAGCCAGCTTCTGGGACACCTGGAACACCAGGCTATACTAAAGCTAACTGCGTGGTCAATTGGACTTCTC
GCACCATGTTAAGCACTAATAAAAATATTCCTGGTCGTAACCAGCCAATGTATGGGCTAGGCGTGATGACAGGCTATAAG
CATTTTATGGGTAAAAAGAGGTGGTTTGGGTTGCGTTATTATGGTTTTTTTGACTATGGGCATTCCAATTTCTCTAACTC
TAGGGCCGCTAACGCCATATCGCCTTTCTATTTGAGCGATCAAAAAACCGACATGTATACTTATGGTTTTGGTACGGACA
CGCTTTTTAATGTGGTGGATAAGCCTAAAGTTACGGCTGGGTTTTTTGTGGGCGTGAATTTTGCGGGTAACACTTGGACT
AATAATCGTGTGGGGTATTTTAAGGATGGGTATGTTTATGGCGTCAATACCAACGCTGACGCTTACATGACTAACGCTGA
TGGCACGATCACATGTGGGGATACGACGCCAGCGAGTTGTAATGTGGGGATCAACCCTAACAGCGTCTATGCCACAGGAA
AATTAAACTCTAAAGTGAATAGCACGATTTTCCAATTTTTAGTGAATGTGGGCATTAGAACCAATATTTTTGAACACCAT
GGCATTGAGTTTGGTATCAAAATCCCTACGCTCCCTAATCACTTTTTCAAAGGCTCTACCACCATTAAAGAGCAAAGCCA
AGGTCCGCTAAAGAATGGCAAACCAACCACTATCGCCGGAGCAGAAACCAATTTCAGCTTAACCCAAACCTTACGCCGTC
AGTATTCTATGTATTTGCGTTATGTTTATACTTTTTAA

Upstream 100 bases:

>100_bases
GGGAATTTTAGGGGTGGTTTTTGCTTGACTTTTAAGATTGCAATTGGTTATAATAAAATAATTCAGAAAGTAATACTGCA
TTAGGCAGAGTGTCTCAAAA

Downstream 100 bases:

>100_bases
GGTTATCAAAGCTTGATTTTTCAAGCTTTTATTTAGTGGCTTTTTTGTTATTCTGCTTTTTGTAAGATCAGCATAAAGTT
TCGTTAATCTTATCTTTGAA

Product: outer membrane protein 2

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HorA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Function; Outer Membrane Protein HorK; Adhesin; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MALHFIVKKKSRMQNRRVCKNFNRKESVLMAQFVSKKGSVVLGALLSSLWLTSPLIAHEKNGAFVGISLEVGRADQKTNA
YKNGELFQVPFGDVSANDDGNVPNGQTGGCQPASGTPGTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYK
HFMGKKRWFGLRYYGFFDYGHSNFSNSRAANAISPFYLSDQKTDMYTYGFGTDTLFNVVDKPKVTAGFFVGVNFAGNTWT
NNRVGYFKDGYVYGVNTNADAYMTNADGTITCGDTTPASCNVGINPNSVYATGKLNSKVNSTIFQFLVNVGIRTNIFEHH
GIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKNGKPTTIAGAETNFSLTQTLRRQYSMYLRYVYTF

Sequences:

>Translated_385_residues
MALHFIVKKKSRMQNRRVCKNFNRKESVLMAQFVSKKGSVVLGALLSSLWLTSPLIAHEKNGAFVGISLEVGRADQKTNA
YKNGELFQVPFGDVSANDDGNVPNGQTGGCQPASGTPGTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYK
HFMGKKRWFGLRYYGFFDYGHSNFSNSRAANAISPFYLSDQKTDMYTYGFGTDTLFNVVDKPKVTAGFFVGVNFAGNTWT
NNRVGYFKDGYVYGVNTNADAYMTNADGTITCGDTTPASCNVGINPNSVYATGKLNSKVNSTIFQFLVNVGIRTNIFEHH
GIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKNGKPTTIAGAETNFSLTQTLRRQYSMYLRYVYTF
>Mature_384_residues
ALHFIVKKKSRMQNRRVCKNFNRKESVLMAQFVSKKGSVVLGALLSSLWLTSPLIAHEKNGAFVGISLEVGRADQKTNAY
KNGELFQVPFGDVSANDDGNVPNGQTGGCQPASGTPGTPGYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYKH
FMGKKRWFGLRYYGFFDYGHSNFSNSRAANAISPFYLSDQKTDMYTYGFGTDTLFNVVDKPKVTAGFFVGVNFAGNTWTN
NRVGYFKDGYVYGVNTNADAYMTNADGTITCGDTTPASCNVGINPNSVYATGKLNSKVNSTIFQFLVNVGIRTNIFEHHG
IEFGIKIPTLPNHFFKGSTTIKEQSQGPLKNGKPTTIAGAETNFSLTQTLRRQYSMYLRYVYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42477; Mature: 42345

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALHFIVKKKSRMQNRRVCKNFNRKESVLMAQFVSKKGSVVLGALLSSLWLTSPLIAHEK
CEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEECC
NGAFVGISLEVGRADQKTNAYKNGELFQVPFGDVSANDDGNVPNGQTGGCQPASGTPGTP
CCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYKHFMGKKRWFGLRYYGFFDYG
CCEECEEEEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEEEEEECC
HSNFSNSRAANAISPFYLSDQKTDMYTYGFGTDTLFNVVDKPKVTAGFFVGVNFAGNTWT
CCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHHHHCCCCEEEEEEEEEEECCCCCC
NNRVGYFKDGYVYGVNTNADAYMTNADGTITCGDTTPASCNVGINPNSVYATGKLNSKVN
CCCCCEEECCEEEEECCCCCEEEECCCCEEEECCCCCCEEEECCCCCCEEEECCCCCHHH
STIFQFLVNVGIRTNIFEHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKNGKPTTIAG
HHHHHHHHHCCCEECCHHHCCEEEEEECCCCCCHHCCCCCCCHHCCCCCCCCCCCCEEEC
AETNFSLTQTLRRQYSMYLRYVYTF
CCCCHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure 
ALHFIVKKKSRMQNRRVCKNFNRKESVLMAQFVSKKGSVVLGALLSSLWLTSPLIAHEK
EEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEECC
NGAFVGISLEVGRADQKTNAYKNGELFQVPFGDVSANDDGNVPNGQTGGCQPASGTPGTP
CCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYTKANCVVNWTSRTMLSTNKNIPGRNQPMYGLGVMTGYKHFMGKKRWFGLRYYGFFDYG
CCEECEEEEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEEEEEECC
HSNFSNSRAANAISPFYLSDQKTDMYTYGFGTDTLFNVVDKPKVTAGFFVGVNFAGNTWT
CCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHHHHCCCCEEEEEEEEEEECCCCCC
NNRVGYFKDGYVYGVNTNADAYMTNADGTITCGDTTPASCNVGINPNSVYATGKLNSKVN
CCCCCEEECCEEEEECCCCCEEEECCCCEEEECCCCCCEEEECCCCCCEEEECCCCCHHH
STIFQFLVNVGIRTNIFEHHGIEFGIKIPTLPNHFFKGSTTIKEQSQGPLKNGKPTTIAG
HHHHHHHHHCCCEECCHHHCCEEEEEECCCCCCHHCCCCCCCHHCCCCCCCCCCCCEEEC
AETNFSLTQTLRRQYSMYLRYVYTF
CCCCHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA