| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109946669
GI number: 109946669
Start: 37047
End: 37391
Strand: Direct
Name: fragment 2
Synonym: Hac_0034
Alternate gene names: NA
Gene position: 37047-37391 (Clockwise)
Preceding gene: 109946668
Following gene: 109946675
Centisome position: 2.38
GC content: 36.23
Gene sequence:
>345_bases ATGGCAAACCTTATCAATCAAAACAACCAGCTAAAGGCTAAACCACAACTGCAATTTTTCTACAACCCCTCTCTTTATCC CAAGGCAATGACTCTAACTTATGAAAGCGAAACGCACAATTCTGGTTCAATCCATTCTGATTTAGATAAAATCGCTCAAA TCTATAAAGAAAACGCCGCATTTATTCCCATAGAGTTGCCCGCTCTCAATTCTCTTAAAGCGTTGCAAAATTTACGAAAA GCGAGCAAAGAAAAGGAATTGGTTGGAATCTTAAAATGCTTCAACTCTGATATTTTAAACGCTGAAGATATAGGCAATTC CATGCTATATTCAAATCAAAGATGA
Upstream 100 bases:
>100_bases AGGGAACACTGCTAATCTTATTAGCATCCGCACTGAATTTGAGCATGCCACTATCCCTCTTACTATCCAATACCACACCT ATGCAAATGATAACGATCAC
Downstream 100 bases:
>100_bases AAACACACCGCTGGAAAAAAGCCCCAAAAGACTTTTAAATTCGTTTGGTTGGGGATTTATCAAATTCTTTATCATGGCGA GCATTCTTATGGATAATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAAFIPIELPALNSLKALQNLRK ASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR
Sequences:
>Translated_114_residues MANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAAFIPIELPALNSLKALQNLRK ASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR >Mature_113_residues ANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAAFIPIELPALNSLKALQNLRKA SKEKELVGILKCFNSDILNAEDIGNSMLYSNQR
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12889; Mature: 12758
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAA CCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC FIPIELPALNSLKALQNLRKASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure ANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAA CCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC FIPIELPALNSLKALQNLRKASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA