Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is fragment 2

Identifier: 109946669

GI number: 109946669

Start: 37047

End: 37391

Strand: Direct

Name: fragment 2

Synonym: Hac_0034

Alternate gene names: NA

Gene position: 37047-37391 (Clockwise)

Preceding gene: 109946668

Following gene: 109946675

Centisome position: 2.38

GC content: 36.23

Gene sequence:

>345_bases
ATGGCAAACCTTATCAATCAAAACAACCAGCTAAAGGCTAAACCACAACTGCAATTTTTCTACAACCCCTCTCTTTATCC
CAAGGCAATGACTCTAACTTATGAAAGCGAAACGCACAATTCTGGTTCAATCCATTCTGATTTAGATAAAATCGCTCAAA
TCTATAAAGAAAACGCCGCATTTATTCCCATAGAGTTGCCCGCTCTCAATTCTCTTAAAGCGTTGCAAAATTTACGAAAA
GCGAGCAAAGAAAAGGAATTGGTTGGAATCTTAAAATGCTTCAACTCTGATATTTTAAACGCTGAAGATATAGGCAATTC
CATGCTATATTCAAATCAAAGATGA

Upstream 100 bases:

>100_bases
AGGGAACACTGCTAATCTTATTAGCATCCGCACTGAATTTGAGCATGCCACTATCCCTCTTACTATCCAATACCACACCT
ATGCAAATGATAACGATCAC

Downstream 100 bases:

>100_bases
AAACACACCGCTGGAAAAAAGCCCCAAAAGACTTTTAAATTCGTTTGGTTGGGGATTTATCAAATTCTTTATCATGGCGA
GCATTCTTATGGATAATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAAFIPIELPALNSLKALQNLRK
ASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR

Sequences:

>Translated_114_residues
MANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAAFIPIELPALNSLKALQNLRK
ASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR
>Mature_113_residues
ANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAAFIPIELPALNSLKALQNLRKA
SKEKELVGILKCFNSDILNAEDIGNSMLYSNQR

Specific function: Unknown

COG id: COG1106

COG function: function code R; Predicted ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12889; Mature: 12758

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAA
CCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
FIPIELPALNSLKALQNLRKASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANLINQNNQLKAKPQLQFFYNPSLYPKAMTLTYESETHNSGSIHSDLDKIAQIYKENAA
CCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
FIPIELPALNSLKALQNLRKASKEKELVGILKCFNSDILNAEDIGNSMLYSNQR
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA