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The map label for this gene is fragment 1

Identifier: 109946659

GI number: 109946659

Start: 23963

End: 24772

Strand: Reverse

Name: fragment 1

Synonym: Hac_0020

Alternate gene names: NA

Gene position: 24772-23963 (Counterclockwise)

Preceding gene: 109946660

Following gene: 109946658

Centisome position: 1.59

GC content: 37.78

Gene sequence:

>810_bases
ATGGAAAAACCATTGAAGTTTTTAAAATTCTTTGCAAAGAGCGTGGCGTTAGATGAAAAATTTTTAATGTTTCTTGTATG
CAGTGCTCTAGCTAACGCTTATAGGAATAACGATTTGTTTTCTTTCTCTAAAGGCTTTTTAGGCGCTTTTTTAATTGGGT
TTGTGGTGTATTATTTTTGTGCACTGATCCCTAAAAAACGCTTGAGATATTCATTAGAGTGGCTGTTTATAGGGAGCAAT
ATCGCTCTTAGCGTGGCAGAAATTTTTATGCTCTTTATGTTTAAAATGCCTTTTTCAAAAGGCTTGATTGACACGCTTTT
AGCCACAAATGGCTCTGAAACGATGGCGTTTATAAAAAGCTATAAAAACTATTTGCTTTACTACGCTTTCATTTTGATCG
CTTTGTTGATCGCTATTAAAATGATTCGTTTTAGAGCGCTTGTGCCTGGTGTGATAGCGAGCGTTTTAGGAGTTTCTATC
CTTATGATAGGGAGCGTTCGTAACCTTAAGCCCCTTACAAACAACGACGCCATTTTGAAAAAATCATTATTTTCCCTTTC
CTTAACCAAGGGGCTTTATTCCACCTATTTAAGCTTATTTGATCGCCAACGAGCCATAAAGTTTTATAGCGCTTTAAAGA
ACCTTTATTTACCAAGCGGCTATCTTTCTAGCACAGGCGATGTCCCAAATGTTGTCTTGGTCATCGGCGAAAGTGCAAGC
AGAAATTTTATGCAACTCTATGGTTATAGCGTTCCTAATAACCCCTTATTGAGCCAACTCGCTAACGAGAGAGAGAGAGA
GAGAGAGTAG

Upstream 100 bases:

>100_bases
TTAAAACCCACATAAGATCGCGGACGGTTAGAGATTATTTTTATTATAGAATAAAAAATATTTTGAAAAAAGTTTTCAAA
TTCTCTTAAAGGACATTTTC

Downstream 100 bases:

>100_bases
CCTATTCGTCTTTTCTGATGTCATAAGCAAAGAAGCCCATACTTCTCCTACCTTTGAAAACTTGCTCAATTATAGCGACG
CTGAAACAACCAAGCCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MEKPLKFLKFFAKSVALDEKFLMFLVCSALANAYRNNDLFSFSKGFLGAFLIGFVVYYFCALIPKKRLRYSLEWLFIGSN
IALSVAEIFMLFMFKMPFSKGLIDTLLATNGSETMAFIKSYKNYLLYYAFILIALLIAIKMIRFRALVPGVIASVLGVSI
LMIGSVRNLKPLTNNDAILKKSLFSLSLTKGLYSTYLSLFDRQRAIKFYSALKNLYLPSGYLSSTGDVPNVVLVIGESAS
RNFMQLYGYSVPNNPLLSQLANERERERE

Sequences:

>Translated_269_residues
MEKPLKFLKFFAKSVALDEKFLMFLVCSALANAYRNNDLFSFSKGFLGAFLIGFVVYYFCALIPKKRLRYSLEWLFIGSN
IALSVAEIFMLFMFKMPFSKGLIDTLLATNGSETMAFIKSYKNYLLYYAFILIALLIAIKMIRFRALVPGVIASVLGVSI
LMIGSVRNLKPLTNNDAILKKSLFSLSLTKGLYSTYLSLFDRQRAIKFYSALKNLYLPSGYLSSTGDVPNVVLVIGESAS
RNFMQLYGYSVPNNPLLSQLANERERERE
>Mature_269_residues
MEKPLKFLKFFAKSVALDEKFLMFLVCSALANAYRNNDLFSFSKGFLGAFLIGFVVYYFCALIPKKRLRYSLEWLFIGSN
IALSVAEIFMLFMFKMPFSKGLIDTLLATNGSETMAFIKSYKNYLLYYAFILIALLIAIKMIRFRALVPGVIASVLGVSI
LMIGSVRNLKPLTNNDAILKKSLFSLSLTKGLYSTYLSLFDRQRAIKFYSALKNLYLPSGYLSSTGDVPNVVLVIGESAS
RNFMQLYGYSVPNNPLLSQLANERERERE

Specific function: Unknown

COG id: COG2194

COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30452; Mature: 30452

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure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CHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA