| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is trpE [H]
Identifier: 109946657
GI number: 109946657
Start: 21455
End: 22957
Strand: Reverse
Name: trpE [H]
Synonym: Hac_0018
Alternate gene names: 109946657
Gene position: 22957-21455 (Counterclockwise)
Preceding gene: 109946658
Following gene: 109946656
Centisome position: 1.48
GC content: 38.86
Gene sequence:
>1503_bases ATGATTAGTCTCATAGAAAAAGCCCCTTACATTCCCTACCCCCTAGCTCTTTATGAAAAATTAGAGCGCCAACACACCTT GCTTTTTGAAAGCGCTGAGATTGAGAGCAAAGCGCACACTAAATCCCTGTTGATGGCTAAAGCTTGTTTGAAGCTAATTT GCAATCACAATGTCGTAACTATCACCAGCTTGACGGCTAATGGCGGAGCGTTTTTGCAAAAATTGAGCGCGTTTTTTAAA ATGCCCATAAAAGACAATACCCTAACTTTAACTTACACGCAAGACAAAAAAGCCAAAGATGAGTTTTCTAAACTCTTTGA GCCTAGCCCTTTTGACGCTTTAAGGGGGCTTTTTAAAAGCGTTAAAACAAACCCCAAACACCCCTTTACGCTTTTAAGTG CGGGCGTGTTTTCTTTTGAAATGCTCAATTTCTTTGAAGATTTACCCCATTTAAAAGCAAAAGACAACACAGCACATGAT TTTATTTTTTTCGTCGCGCAAAATTTGATCATTATCGATCACAAAGAAAAAAGCGCTGAAATTTTGGGGGCGTGTTTTGA TGAGCGCTTTAAAACAGAGATAGCTAAAGAATTACAAGATTTAAAAGAGTTGGCTAAAAACATTAAAAGCGACTTTATCC CTAAAAAATCTGAGCAAAGCACAGAAGTTAGTGTTAGTTGCGGCGATAGCGAGTTTGAAAAAAAAGTGTTATCCTTACAA GAAGAAATTAAAAAGGGCGAGATTTTTCAAGCGGTATTATCGCGCAGTTTTTACATGGAGTGCTTGGAGGGTTTGAGCGC GTATTATCATTTAAAGCTAACTAACCCTAGCCCTTATATGTTTTATATCAAAGATAGCGATTTTATTCTTTTTGGGGCAA GCCCTGAGAGCGCCTTGAAGTACAACGCTTTAACGAATATGGCTGAAATTTACCCCATTGCTGGCACTCGTTTGAGGGGT AAGGATAAAGAAGGGAATATTGATTACGATTTAGATAGTAAAATGGAATTTGATTTGCAACACGACTTTAAAGAAAGGGC TGAACACATCATGCTAGTGGATTTAGCCAGAAACGACATGGCCAGAGTTTCAAAAAAGCGCTATTGCGATAAGCTTTTAA AAGTGGATAAATATTCTAATGTCATGCATTTAGTTTCAAGGGTTGTGGGGGAATTGAAAAAAGGGTGCGATAGTTTGCAT GCTTATAGGAGTTTTATGAACGCCGGTACGCTTAGCGGAGCGCCTAAAATCTCTGCAATTAAACTCATTTACCAATTAGA AAATCAAAGAAGAGGCTCTTATGGAGGGAGTGTGGGTTATCTGAATAGCGAAGGGTCTATGGATTCTTGTATCACTATCC GTTCATGTTTTGTCAAAAACAATCAAGCTGTGATCCAAGCAGGAGCTGGCATCGTTTTAGATAGCGTGCCACAAAATGAA GCGGATGAAACAAAAGCCAAAGCTAAAGCCCTTATTGATGCGATCAGGAAAACAAGCTTATGA
Upstream 100 bases:
>100_bases GGATACAAATTTTTCTTGTTATTGCGTTTGAATAGCCAATTTAGAGTCCATTTATCTATTTATTGTAGAATACGGCTTCA TTTTTAATTTGAAGCAAGCG
Downstream 100 bases:
>100_bases AAATCTTTTTTATAGATAATTTTGATTCTTTCTCTTATAACTTGGTGTATGAATTGGAGTGCTTGGGTTATGAAGTGGCT GTTTATCAAAACGATATTGA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MISLIEKAPYIPYPLALYEKLERQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNVVTITSLTANGGAFLQKLSAFFK MPIKDNTLTLTYTQDKKAKDEFSKLFEPSPFDALRGLFKSVKTNPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHD FIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIAKELQDLKELAKNIKSDFIPKKSEQSTEVSVSCGDSEFEKKVLSLQ EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALKYNALTNMAEIYPIAGTRLRG KDKEGNIDYDLDSKMEFDLQHDFKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLH AYRSFMNAGTLSGAPKISAIKLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNQAVIQAGAGIVLDSVPQNE ADETKAKAKALIDAIRKTSL
Sequences:
>Translated_500_residues MISLIEKAPYIPYPLALYEKLERQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNVVTITSLTANGGAFLQKLSAFFK MPIKDNTLTLTYTQDKKAKDEFSKLFEPSPFDALRGLFKSVKTNPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHD FIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIAKELQDLKELAKNIKSDFIPKKSEQSTEVSVSCGDSEFEKKVLSLQ EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALKYNALTNMAEIYPIAGTRLRG KDKEGNIDYDLDSKMEFDLQHDFKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLH AYRSFMNAGTLSGAPKISAIKLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNQAVIQAGAGIVLDSVPQNE ADETKAKAKALIDAIRKTSL >Mature_500_residues MISLIEKAPYIPYPLALYEKLERQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNVVTITSLTANGGAFLQKLSAFFK MPIKDNTLTLTYTQDKKAKDEFSKLFEPSPFDALRGLFKSVKTNPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHD FIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIAKELQDLKELAKNIKSDFIPKKSEQSTEVSVSCGDSEFEKKVLSLQ EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALKYNALTNMAEIYPIAGTRLRG KDKEGNIDYDLDSKMEFDLQHDFKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLH AYRSFMNAGTLSGAPKISAIKLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNQAVIQAGAGIVLDSVPQNE ADETKAKAKALIDAIRKTSL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=497, Percent_Identity=46.6800804828974, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI1788114, Length=397, Percent_Identity=27.7078085642317, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1786809, Length=220, Percent_Identity=28.6363636363636, Blast_Score=79, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=281, Percent_Identity=43.4163701067616, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6324361, Length=374, Percent_Identity=22.192513368984, Blast_Score=81, Evalue=4e-16,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 56331; Mature: 56331
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLIEKAPYIPYPLALYEKLERQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNVVT CCCCCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ITSLTANGGAFLQKLSAFFKMPIKDNTLTLTYTQDKKAKDEFSKLFEPSPFDALRGLFKS EEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH VKTNPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHDFIFFVAQNLIIIDHKEKSAE HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHH ILGACFDERFKTEIAKELQDLKELAKNIKSDFIPKKSEQSTEVSVSCGDSEFEKKVLSLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHH EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALK HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCHHHH YNALTNMAEIYPIAGTRLRGKDKEGNIDYDLDSKMEFDLQHDFKERAEHIMLVDLARNDM HHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEHHHHHH ARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNQAVIQAGAGIVLDSVPQNE HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCC ADETKAKAKALIDAIRKTSL CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MISLIEKAPYIPYPLALYEKLERQHTLLFESAEIESKAHTKSLLMAKACLKLICNHNVVT CCCCCCCCCCCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ITSLTANGGAFLQKLSAFFKMPIKDNTLTLTYTQDKKAKDEFSKLFEPSPFDALRGLFKS EEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH VKTNPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHDFIFFVAQNLIIIDHKEKSAE HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHH ILGACFDERFKTEIAKELQDLKELAKNIKSDFIPKKSEQSTEVSVSCGDSEFEKKVLSLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHH EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALK HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCHHHH YNALTNMAEIYPIAGTRLRGKDKEGNIDYDLDSKMEFDLQHDFKERAEHIMLVDLARNDM HHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEHHHHHH ARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH KLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNQAVIQAGAGIVLDSVPQNE HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCC ADETKAKAKALIDAIRKTSL CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]